name | lists | location/seqs | annotations | notes |
---|---|---|---|---|
scnpilot_solids1_trim150_scaffold_59_1
Acidovorax sp. JS42, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
2..346
|
Ribosome-binding factor A n=1 Tax=Acidovorax sp. (strain JS42) RepID=RBFA_ACISJ
rbfA; ribosome-binding factor A; K02834 ribosome-binding factor A
Ribosome-binding factor A {ECO:0000255|HAMAP-Rule:MF_00003}; TaxID=232721 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. (strain JS42).;"
|
|
scnpilot_solids1_trim150_scaffold_59_2
Acidovorax sp. MR-S7, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
343..1314
|
tRNA pseudouridine synthase B; K03177 tRNA pseudouridine55 synthase [EC:5.4.99.25]
tRNA pseudouridine synthase B {ECO:0000256|HAMAP-Rule:MF_01080, ECO:0000256|SAAS:SAAS00043051}; EC=5.4.99.25 {ECO:0000256|HAMAP-Rule:MF_01080, ECO:0000256|SAAS:SAAS00043054};; tRNA pseudouridine(55) synthase {ECO:0000256|HAMAP-Rule:MF_01080}; tRNA pseudouridylate synthase {ECO:0000256|HAMAP-Rule:MF_01080}; tRNA-uridine isomerase {ECO:0000256|HAMAP-Rule:MF_01080}; TaxID=1268622 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. MR-S7.;
tRNA pseudouridine synthase B n=1 Tax=Acidovorax sp. MR-S7 RepID=UPI00036728DB
|
|
scnpilot_solids1_trim150_scaffold_59_3
Acidovorax sp. JS42, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
1311..3146
|
GTP-binding protein TypA n=1 Tax=Acidovorax sp. (strain JS42) RepID=A1W8Z1_ACISJ
GTP-binding protein TypA; K06207 GTP-binding protein
GTP-binding protein TypA {ECO:0000313|EMBL:ABM42716.1}; TaxID=232721 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. (strain JS42).;"
|
|
scnpilot_solids1_trim150_scaffold_59_4
Acidovorax temperans, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
3167..4252
|
3-hydroxyisobutyryl-CoA hydrolase (EC:4.2.1.17)
rbh
3-hydroxyisobutyryl-CoA hydrolase n=1 Tax=Acidovorax sp. NO-1 RepID=H0BV96_9BURK
rbh
3-hydroxyisobutyryl-CoA hydrolase {ECO:0000313|EMBL:KJA09512.1}; TaxID=80878 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax temperans.;"
|
|
scnpilot_solids1_trim150_scaffold_59_5
BJP_08E140C01_Xanthomonadales_64_42, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
4318..4872
|
Uncharacterized protein n=1 Tax=Ruegeria pomeroyi (strain ATCC 700808 / DSM 15171 / DSS-3) RepID=Q5LL54_RUEPO
hypothetical protein
Tax=BJP_08E140C01_Xanthomonadales_64_42
|
|
scnpilot_solids1_trim150_scaffold_59_6
Acidovorax avenae, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(4881..5354)
|
SsrA-binding protein n=1 Tax=Acidovorax avenae (strain ATCC 19860 / DSM 7227 / JCM 20985 / NCPPB 1011) RepID=F0Q7A5_ACIAP
SsrA-binding protein; K03664 SsrA-binding protein
SsrA-binding protein {ECO:0000256|HAMAP-Rule:MF_00023, ECO:0000256|SAAS:SAAS00023472}; TaxID=643561 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax avenae (strain ATCC 19860 / DSM 7227 / JCM 20985 / NCPPB; 1011).;"
|
|
scnpilot_solids1_trim150_scaffold_59_7
Acidovorax sp. MR-S7, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
5437..5877
|
cyclase n=2 Tax=Acidovorax sp. MR-S7 RepID=UPI00037D84DD
Cyclase/dehydrase {ECO:0000313|EMBL:GAD21945.1}; TaxID=1268622 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. MR-S7.;"
cyclase/dehydrase
|
|
scnpilot_solids1_trim150_scaffold_59_8
Acidovorax sp. MR-S7, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
5870..6178
|
hypothetical protein n=1 Tax=Acidovorax sp. MR-S7 RepID=UPI00036CFB70
UPF0125 protein AVS7_01706 {ECO:0000256|HAMAP-Rule:MF_00460}; TaxID=1268622 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. MR-S7.;"
hypothetical protein; K09801 hypothetical protein
|
|
scnpilot_solids1_trim150_scaffold_59_9
Acidovorax sp. JS42, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(6188..6766)
|
Uncharacterized protein n=1 Tax=Acidovorax sp. (strain JS42) RepID=A1W8Y2_ACISJ
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABM42707.1}; Flags: Precursor;; TaxID=232721 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. (strain JS42).;"
|
|
scnpilot_solids1_trim150_scaffold_59_10
Acidovorax sp. JS42, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
6917..8392
|
Inosine-5'-monophosphate dehydrogenase {ECO:0000256|HAMAP-Rule:MF_01964, ECO:0000256|RuleBase:RU003928}; Short=IMP dehydrogenase {ECO:0000256|HAMAP-Rule:MF_01964};; Short=IMPD {ECO:0000256|HAMAP-Rule:MF_01964};; Short=IMPDH {ECO:0000256|HAMAP-Rule:MF_01964};; EC=1.1.1.205 {ECO:0000256|HAMAP-Rule:MF_01964, ECO:0000256|RuleBase:RU003928};; TaxID=232721 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. (strain JS42).;"
Inosine-5'-monophosphate dehydrogenase n=2 Tax=Acidovorax RepID=A1W8Y1_ACISJ
rbh
|
|
scnpilot_solids1_trim150_scaffold_59_11
Acidovorax delafieldii, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
8469..10088
|
GMP synthase [glutamine-hydrolyzing] {ECO:0000256|HAMAP-Rule:MF_00344, ECO:0000256|SAAS:SAAS00008786}; EC=6.3.5.2 {ECO:0000256|HAMAP-Rule:MF_00344, ECO:0000256|SAAS:SAAS00008728};; GMP synthetase {ECO:0000256|HAMAP-Rule:MF_00344}; Glutamine amidotransferase {ECO:0000256|HAMAP-Rule:MF_00344}; TaxID=573060 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax delafieldii 2AN.;"
GMP synthase large subunit (EC:6.3.5.2); K01951 GMP synthase (glutamine-hydrolysing) [EC:6.3.5.2]
rbh
GMP synthase n=1 Tax=Acidovorax radicis RepID=UPI0002376262
rbh
|
|
scnpilot_solids1_trim150_scaffold_59_12
Paracoccus versutus, Paracoccus, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(10148..11302)
|
Arginase/agmatinase/formiminoglutamase id=12494314 bin=THIO_HI species=Sphingobium sp. HDIP04 genus=Sphingobium taxon_order=Sphingomonadales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria
rbh
Arginase {ECO:0000313|EMBL:KGJ10086.1}; TaxID=34007 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Paracoccus.;" source="Paracoccus versutus (Thiobacillus versutus).;"
Arginase/agmatinase/formiminoglutamase
rbh
|
|
scnpilot_solids1_trim150_scaffold_59_13
Enterobacter cloacae, Enterobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
11611..11982
|
Integrase n=1 Tax=Enterobacter cloacae EC_38VIM1 RepID=S9Y198_ENTCL
Integrase {ECO:0000313|EMBL:EPY96030.1}; TaxID=1334630 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Enterobacter; Enterobacter cloacae complex.;" source="Enterobacter cloacae EC_38VIM1.;"
phage integrase family site-specific recombinase
|
|
scnpilot_solids1_trim150_scaffold_59_14
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
12021..13145
|
FAD dependent oxidoreductase n=1 Tax=Acidovorax sp. (strain JS42) RepID=A1W7T0_ACISJ
rbh
FAD dependent oxidoreductase family protein {ECO:0000313|EMBL:KFJ13205.1}; TaxID=80866 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia acidovorans (Pseudomonas acidovorans) (Comamonas acidovorans).;"
FAD dependent oxidoreductase
rbh
|
|
scnpilot_solids1_trim150_scaffold_59_15
Sulfuritalea hydrogenivorans, Sulfuritalea, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
13202..14311
|
TRAP dicarboxylate transporter, DctP subunit n=1 Tax=Rhodoferax ferrireducens (strain DSM 15236 / ATCC BAA-621 / T118) RepID=Q21YD7_RHOFD
TRAP dicarboxylate transporter subunit DctP {ECO:0000313|EMBL:BAO28853.1}; TaxID=1223802 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Sulfuritalea.;" source="Sulfuritalea hydrogenivorans sk43H.;"
TRAP dicarboxylate transporter subunit DctP; K11688 C4-dicarboxylate-binding protein DctP
|
|
scnpilot_solids1_trim150_scaffold_59_16
RLO_Burkholderiales_61_40, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
14381..15082
|
Tripartite ATP-independent periplasmic transporter, DctQ component n=1 Tax=Rhodoferax ferrireducens (strain DSM 15236 / ATCC BAA-621 / T118) RepID=Q21QT8_RHOFD
rbh
tripartite ATP-independent periplasmic transporter DctQ; K11689 C4-dicarboxylate transporter, DctQ subunit
rbh
Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_61_40_curated
|
|
scnpilot_solids1_trim150_scaffold_59_17
R_Rhodocyclales_63_24, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
15079..16362
|
TRAP dicarboxylate transporter, DctM subunit n=1 Tax=Dechloromonas aromatica (strain RCB) RepID=Q47BR0_DECAR
rbh
TRAP dicarboxylate transporter, DctM subunit; K11690 C4-dicarboxylate transporter, DctM subunit
rbh
Tax=RIFCSPLOWO2_02_FULL_Rhodocyclales_63_24_curated
|
|
scnpilot_solids1_trim150_scaffold_59_18
Acidovorax ebreus, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(16431..17711)
|
o-acetylhomoserine/o-acetylserine sulfhydrylase (EC:2.5.1.49); K01740 O-acetylhomoserine (thiol)-lyase [EC:2.5.1.49]
rbh
O-acetylhomoserine/O-acetylserine sulfhydrylase {ECO:0000313|EMBL:ACM33047.1}; EC=2.5.1.49 {ECO:0000313|EMBL:ACM33047.1};; TaxID=535289 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax ebreus (strain TPSY) (Diaphorobacter sp. (strain TPSY)).;"
O-acetylhomoserine/O-acetylserine sulfhydrylase n=1 Tax=Acidovorax ebreus (strain TPSY) RepID=B9MIN1_ACIET
rbh
|
|
scnpilot_solids1_trim150_scaffold_59_19
Acidovorax ebreus, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
17839..18078
|
Uncharacterized protein n=1 Tax=Acidovorax ebreus (strain TPSY) RepID=B9MIN4_ACIET
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACM33050.1}; Flags: Precursor;; TaxID=535289 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax ebreus (strain TPSY) (Diaphorobacter sp. (strain TPSY)).;"
|
|
scnpilot_solids1_trim150_scaffold_59_20
Acidovorax ebreus, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
18140..19288
|
tRNA-specific adenosine deaminase {ECO:0000256|HAMAP-Rule:MF_00972}; EC=3.5.4.33 {ECO:0000256|HAMAP-Rule:MF_00972};; TaxID=535289 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax ebreus (strain TPSY) (Diaphorobacter sp. (strain TPSY)).;"
CMP/dCMP deaminase zinc-binding n=1 Tax=Acidovorax ebreus (strain TPSY) RepID=B9MIN5_ACIET
rbh
|
|
scnpilot_solids1_trim150_scaffold_59_21
Acidovorax ebreus, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
19294..20262
|
muramoyltetrapeptide carboxypeptidase (EC:3.4.17.13); K01297 muramoyltetrapeptide carboxypeptidase [EC:3.4.17.13]
Muramoyltetrapeptide carboxypeptidase {ECO:0000313|EMBL:ACM33052.1}; EC=3.4.17.13 {ECO:0000313|EMBL:ACM33052.1};; TaxID=535289 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax ebreus (strain TPSY) (Diaphorobacter sp. (strain TPSY)).;"
Muramoyltetrapeptide carboxypeptidase n=1 Tax=Acidovorax ebreus (strain TPSY) RepID=B9MIN6_ACIET
|
|
scnpilot_solids1_trim150_scaffold_59_22
RLO_Burkholderiales_64_33, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
20357..21277
|
Forkhead-associated protein n=2 Tax=Alicycliphilus denitrificans RepID=E8TSJ8_ALIDB
rbh
forkhead-associated protein
rbh
Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_64_33_curated
|
|
scnpilot_solids1_trim150_scaffold_59_23
Acidovorax sp. MR-S7, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(21296..22174)
|
cobyrinic acid a,c-diamide synthase n=1 Tax=Acidovorax sp. MR-S7 RepID=UPI00037478B6
rbh
Site-determining protein {ECO:0000256|PIRNR:PIRNR003092}; TaxID=1268622 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. MR-S7.;"
cobyrinic acid ac-diamide synthase
rbh
|
|
scnpilot_solids1_trim150_scaffold_59_24
Acidovorax sp. MR-S7, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(22158..22904)
|
diguanylate cyclase n=1 Tax=Acidovorax sp. MR-S7 RepID=UPI0003713965
rbh
FOG: GGDEF domain {ECO:0000313|EMBL:GAD21436.1}; TaxID=1268622 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. MR-S7.;"
diguanylate cyclase
rbh
|
|
scnpilot_solids1_trim150_scaffold_59_25
Acidovorax sp. MR-S7, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(22998..24677)
|
sulfate transporter n=1 Tax=Acidovorax sp. MR-S7 RepID=UPI00037979C2
rbh
Sulphate transporter {ECO:0000313|EMBL:GAD23534.1}; TaxID=1268622 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. MR-S7.;"
sulfate transporter
rbh
|
|
scnpilot_solids1_trim150_scaffold_59_26
Alicycliphilus denitrificans, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
24709..25929
|
cys/met metabolism pyridoxal-phosphate-dependent protein; K01760 cystathionine beta-lyase [EC:4.4.1.8]
rbh
Cystathionine beta-lyase {ECO:0000313|EMBL:AEB85210.1}; EC=4.4.1.8 {ECO:0000313|EMBL:AEB85210.1};; TaxID=596154 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus denitrificans (strain DSM 14773 / CIP 107495 / K601).;"
Cys/Met metabolism pyridoxal-phosphate-dependent protein n=2 Tax=Alicycliphilus denitrificans RepID=E8TRR5_ALIDB
rbh
|
|
scnpilot_solids1_trim150_scaffold_59_27
Acidovorax temperans, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(25973..26650)
|
hypothetical protein n=1 Tax=Acidovorax sp. MR-S7 RepID=UPI00036F3F74
Arylesterase {ECO:0000313|EMBL:KJA12197.1}; TaxID=80878 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax temperans.;"
arylesterase
|
|
scnpilot_solids1_trim150_scaffold_59_28
GWA2_Curvibacter_64_110_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
26670..27332
|
Abc transporter related protein n=1 Tax=Hylemonella gracilis ATCC 19624 RepID=F3KU00_9BURK
ABC transporter-like protein; K02003 putative ABC transport system ATP-binding protein
Tax=GWA2_Curvibacter_64_110_curated
|
|
scnpilot_solids1_trim150_scaffold_59_29
Acidovorax sp. JS42, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(27323..28756)
|
Cardiolipin synthetase 2 {ECO:0000313|EMBL:ABM43675.1}; EC=2.7.8.- {ECO:0000313|EMBL:ABM43675.1};; TaxID=232721 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. (strain JS42).;"
Cardiolipin synthetase 2 n=1 Tax=Acidovorax sp. (strain JS42) RepID=A1WBQ0_ACISJ
rbh
|
|
scnpilot_solids1_trim150_scaffold_59_30
Hylemonella gracilis, Hylemonella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
28784..29575
|
23S rRNA (guanosine-2'-O-)-methyltransferase RlmB {ECO:0000256|HAMAP-Rule:MF_01887}; EC=2.1.1.185 {ECO:0000256|HAMAP-Rule:MF_01887};; 23S rRNA (guanosine2251 2'-O)-methyltransferase {ECO:0000256|HAMAP-Rule:MF_01887}; 23S rRNA Gm2251 2'-O-methyltransferase {ECO:0000256|HAMAP-Rule:MF_01887}; TaxID=1458275 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hylemonella.;" source="Hylemonella gracilis str. Niagara R.;"
TrmH family RNA methyltransferase; K03218 23S rRNA (guanosine2251-2'-O)-methyltransferase [EC:2.1.1.185] id=5083701 bin=GWF1_Burkholderiales_GWF1_66_17 species=unknown genus=unknown taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWF1_Burkholderiales_GWF1_66_17 organism_group=Betaproteobacteria organism_desc="Control" bin for RuBisCO paper Leave in GW2011 GOOD
rbh
rlmB; 23S rRNA (guanosine-2'-O-)-methyltransferase; K03218 23S rRNA (guanosine2251-2'-O)-methyltransferase [EC:2.1.1.185]
|