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scnpilot_solids1_trim150_scaffold_65

Search features with annotation key words

Displaying items 31-60 of 134 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_solids1_trim150_scaffold_65_31
Alicycliphilus sp. B1, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(32774..33601)
DNA (828bp) protein (276aa)
Polar amino acid ABC transporter, inner membrane subunit n=2 Tax=Alicycliphilus denitrificans RepID=E8TU38_ALIDB
polar amino acid ABC transporter permease; K10007 glutamate transport system permease protein
Polar amino acid ABC transporter permease {ECO:0000313|EMBL:GAO22034.1}; TaxID=1603291 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus sp. B1.;"
scnpilot_solids1_trim150_scaffold_65_32
Hylemonella gracilis, Hylemonella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(33598..34260)
DNA (663bp) protein (221aa)
Polar amino acid ABC transporter, inner membrane subunit n=1 Tax=Alicycliphilus denitrificans (strain DSM 14773 / CIP 107495 / K601) RepID=F4G8C5_ALIDK
polar amino acid ABC transporter permease; K10006 glutamate transport system permease protein
Amino acid ABC transporter permease {ECO:0000313|EMBL:EYC50565.1}; TaxID=1458275 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hylemonella.;" source="Hylemonella gracilis str. Niagara R.;"
scnpilot_solids1_trim150_scaffold_65_33
Alicycliphilus sp. B1, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(34264..35166)
DNA (903bp) protein (301aa)
Extracellular solute-binding protein family 3 n=1 Tax=Alicycliphilus denitrificans (strain DSM 18852 / JCM 14587 / BC) RepID=E8TU36_ALIDB rbh
ABC transporter substrate-binding protein; K10005 glutamate transport system substrate-binding protein rbh
ABC transporter substrate-binding protein {ECO:0000313|EMBL:GAO22036.1}; TaxID=1603291 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus sp. B1.;"
scnpilot_solids1_trim150_scaffold_65_34
Hahella chejuensis, Hahella, Oceanospirillales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

35365..36438
DNA (1074bp) protein (358aa)
Putative uncharacterized protein n=1 Tax=Hahella chejuensis (strain KCTC 2396) RepID=Q2SH13_HAHCH
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABC30061.1}; TaxID=349521 species="Bacteria; Proteobacteria; Gammaproteobacteria; Oceanospirillales; Hahellaceae; Hahella.;" source="Hahella chejuensis (strain KCTC 2396).;"
scnpilot_solids1_trim150_scaffold_65_35
Hahella chejuensis, Hahella, Oceanospirillales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

36534..38111
DNA (1578bp) protein (526aa)
FOG: TPR repeat n=1 Tax=Hahella chejuensis (strain KCTC 2396) RepID=Q2SH14_HAHCH
hypothetical protein
FOG: TPR repeat {ECO:0000313|EMBL:ABC30060.1}; TaxID=349521 species="Bacteria; Proteobacteria; Gammaproteobacteria; Oceanospirillales; Hahellaceae; Hahella.;" source="Hahella chejuensis (strain KCTC 2396).;"
scnpilot_solids1_trim150_scaffold_65_36
Sphaerotilus natans, Sphaerotilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(38165..38590)
DNA (426bp) protein (142aa)
MaoC domain protein dehydratase n=1 Tax=Leptothrix cholodnii (strain ATCC 51168 / LMG 8142 / SP-6) RepID=B1Y522_LEPCP
MaoC-like protein dehydratase {ECO:0000313|EMBL:KDB50345.1}; TaxID=1286631 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Sphaerotilus.;" source="Sphaerotilus natans subsp. natans DSM 6575.;"
dehydratase
scnpilot_solids1_trim150_scaffold_65_37
Leptothrix cholodnii, Leptothrix, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(38596..40074)
DNA (1479bp) protein (493aa)
3-hydroxybutyryl-CoA dehydrogenase (EC:1.1.1.157); K00074 3-hydroxybutyryl-CoA dehydrogenase [EC:1.1.1.157] rbh
3-hydroxybutyryl-CoA dehydrogenase {ECO:0000313|EMBL:ACB35917.1}; EC=1.1.1.157 {ECO:0000313|EMBL:ACB35917.1};; Flags: Precursor;; TaxID=395495 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Leptothrix.;" source="Leptothrix cholodnii (strain ATCC 51168 / LMG 8142 / SP-6) (Leptothrix; discophora (strain SP-6)).;"
3-hydroxybutyryl-CoA dehydrogenase n=1 Tax=Leptothrix cholodnii (strain ATCC 51168 / LMG 8142 / SP-6) RepID=B1Y521_LEPCP rbh
scnpilot_solids1_trim150_scaffold_65_38
Sphaerotilus natans, Sphaerotilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(40071..40868)
DNA (798bp) protein (266aa)
Enoyl-CoA hydratase/isomerase n=1 Tax=Leptothrix cholodnii (strain ATCC 51168 / LMG 8142 / SP-6) RepID=B1Y520_LEPCP rbh
Enoyl-CoA hydratase/isomerase {ECO:0000313|EMBL:KDB50349.1}; TaxID=1286631 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Sphaerotilus.;" source="Sphaerotilus natans subsp. natans DSM 6575.;"
enoyl-CoA hydratase/isomerase rbh
scnpilot_solids1_trim150_scaffold_65_39
Burkholderiales bacterium JOSHI_001, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(40870..42165)
DNA (1296bp) protein (432aa)
benzoyl-CoA oxygenase/reductase, BoxA protein; K15511 benzoyl-CoA 2,3-dioxygenase component A [EC:1.14.12.21] rbh
Benzoyl-CoA oxygenase/reductase, BoxA protein n=1 Tax=Burkholderiales bacterium JOSHI_001 RepID=H5WVB9_9BURK rbh
Benzoyl-CoA oxygenase/reductase, BoxA protein {ECO:0000313|EMBL:EHR69225.1}; TaxID=864051 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales.;" source="Burkholderiales bacterium JOSHI_001.;"
scnpilot_solids1_trim150_scaffold_65_40
Cupriavidus sp. HPC(L), Cupriavidus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(42242..43666)
DNA (1425bp) protein (475aa)
boxB; benzoyl-CoA dioxygenase component b; K15512 benzoyl-CoA 2,3-dioxygenase component B [EC:1.14.12.21] rbh
Benzoyl-CoA oxygenase n=1 Tax=Cupriavidus sp. HPC(L) RepID=V2HGB1_9BURK rbh
Benzoyl-CoA oxygenase {ECO:0000313|EMBL:ESJ04682.1}; TaxID=1217418 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Cupriavidus.;" source="Cupriavidus sp. HPC(L).;"
scnpilot_solids1_trim150_scaffold_65_41
Sphaerotilus natans, Sphaerotilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(43775..45439)
DNA (1665bp) protein (555aa)
benzoyl-CoA-dihydrodiol lyase (EC:4.2.1.17); K15513 benzoyl-CoA-dihydrodiol lyase [EC:4.1.2.44] rbh
Benzoyl-CoA-dihydrodiol lyase n=1 Tax=Burkholderiales bacterium JOSHI_001 RepID=H5WVB7_9BURK rbh
Benzoyl-CoA-dihydrodiol lyase {ECO:0000313|EMBL:KDB50352.1}; TaxID=1286631 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Sphaerotilus.;" source="Sphaerotilus natans subsp. natans DSM 6575.;"
scnpilot_solids1_trim150_scaffold_65_42
Cupriavidus basilensis, Cupriavidus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(45557..46534)
DNA (978bp) protein (326aa)
boxC; benzoyl-CoA-dihydrodiol lyase BoxC (EC:4.1.2.44); K15546 XRE family transcriptional regulator, aerobic/anaerobic benzoate catabolism transcriptional regulator rbh
transcriptional regulator n=1 Tax=Cupriavidus sp. WS RepID=UPI0003820E45 rbh
Cupriavidus basilensis strain 4G11 chromosome secondary, complete sequence {ECO:0000313|EMBL:AJG24594.1}; TaxID=68895 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Cupriavidus.;" source="Cupriavidus basilensis.;"
scnpilot_solids1_trim150_scaffold_65_43
Polaromonas naphthalenivorans, Polaromonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

46660..47121
DNA (462bp) protein (154aa)
Uncharacterized protein n=1 Tax=Polaromonas naphthalenivorans (strain CJ2) RepID=A1VRG7_POLNA
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABM38245.1}; TaxID=365044 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Polaromonas.;" source="Polaromonas naphthalenivorans (strain CJ2).;"
scnpilot_solids1_trim150_scaffold_65_44
BJP_08E140C01_10KDA_Burkholderiales_65_51, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

47133..48686
DNA (1554bp) protein (518aa)
aldehyde dehydrogenase; K15514 3,4-dehydroadipyl-CoA semialdehyde dehydrogenase [EC:1.2.1.77] rbh
Aldehyde dehydrogenase n=1 Tax=Cupriavidus necator (strain ATCC 17699 / H16 / DSM 428 / Stanier 337) RepID=Q0JZX5_CUPNH rbh
Tax=BJP_08E140C01_10KDA_Burkholderiales_65_51
scnpilot_solids1_trim150_scaffold_65_45
BJP_08E140C01_10KDA_Burkholderiales_65_51, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

48712..50310
DNA (1599bp) protein (533aa)
badA; benzoate-coenzyme A ligase (EC:6.2.1.25); K04110 benzoate-CoA ligase [EC:6.2.1.25] rbh
Benzoate-CoA ligase n=1 Tax=Bradyrhizobium sp. (strain BTAi1 / ATCC BAA-1182) RepID=A5EQU3_BRASB rbh
Tax=BJP_08E140C01_10KDA_Burkholderiales_65_51
scnpilot_solids1_trim150_scaffold_65_46
Cupriavidus sp. HPC(L), Cupriavidus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

50307..51113
DNA (807bp) protein (269aa)
Alpha/beta hydrolase n=1 Tax=Cupriavidus sp. HPC(L) RepID=V2HUU0_9BURK rbh
Alpha/beta hydrolase {ECO:0000313|EMBL:ESJ04679.1}; TaxID=1217418 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Cupriavidus.;" source="Cupriavidus sp. HPC(L).;"
alpha/beta hydrolase fold protein rbh
scnpilot_solids1_trim150_scaffold_65_47
Variovorax sp. CF313, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

51142..52311
DNA (1170bp) protein (390aa)
ABC-type branched-chain amino acid transport system, periplasmic component n=1 Tax=Variovorax sp. CF313 RepID=J2K756_9BURK rbh
ABC-type branched-chain amino acid transport system, periplasmic component {ECO:0000313|EMBL:EJL76035.1}; Flags: Precursor;; TaxID=1144315 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax sp. CF313.;"
extracellular ligand-binding receptor; K01999 branched-chain amino acid transport system substrate-binding protein rbh
scnpilot_solids1_trim150_scaffold_65_48
Rhodoferax ferrireducens, Rhodoferax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

52375..53241
DNA (867bp) protein (289aa)
Inner-membrane translocator n=1 Tax=Rhodoferax ferrireducens (strain DSM 15236 / ATCC BAA-621 / T118) RepID=Q222T3_RHOFD rbh
inner-membrane translocator; K01997 branched-chain amino acid transport system permease protein rbh
Inner-membrane translocator {ECO:0000313|EMBL:ABD67970.1}; TaxID=338969 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Rhodoferax.;" source="Rhodoferax ferrireducens (strain ATCC BAA-621 / DSM 15236 / T118); (Albidiferax ferrireducens).;"
scnpilot_solids1_trim150_scaffold_65_49
RIFOXYD12_FULL_Burkholderiales_59_19_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

53238..54257
DNA (1020bp) protein (340aa)
Inner-membrane translocator n=1 Tax=Rhodoferax ferrireducens (strain DSM 15236 / ATCC BAA-621 / T118) RepID=Q222T4_RHOFD rbh
inner-membrane translocator; K01998 branched-chain amino acid transport system permease protein rbh
Tax=RIFOXYD12_FULL_Burkholderiales_59_19_curated
scnpilot_solids1_trim150_scaffold_65_50
Leptothrix cholodnii, Leptothrix, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

54254..55006
DNA (753bp) protein (251aa)
ABC transporter-related protein n=1 Tax=Leptothrix cholodnii (strain ATCC 51168 / LMG 8142 / SP-6) RepID=B1Y508_LEPCP rbh
ABC transporter-like protein; K01995 branched-chain amino acid transport system ATP-binding protein rbh
ABC transporter-related protein {ECO:0000313|EMBL:ACB35904.1}; TaxID=395495 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Leptothrix.;" source="Leptothrix cholodnii (strain ATCC 51168 / LMG 8142 / SP-6) (Leptothrix; discophora (strain SP-6)).;"
scnpilot_solids1_trim150_scaffold_65_51
Leptothrix cholodnii, Leptothrix, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

55003..55719
DNA (717bp) protein (239aa)
ABC transporter-related protein n=1 Tax=Leptothrix cholodnii (strain ATCC 51168 / LMG 8142 / SP-6) RepID=B1Y507_LEPCP rbh
ABC transporter-like protein; K01996 branched-chain amino acid transport system ATP-binding protein rbh
ABC transporter-related protein {ECO:0000313|EMBL:ACB35903.1}; TaxID=395495 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Leptothrix.;" source="Leptothrix cholodnii (strain ATCC 51168 / LMG 8142 / SP-6) (Leptothrix; discophora (strain SP-6)).;"
scnpilot_solids1_trim150_scaffold_65_52
Bordetella bronchiseptica, Bordetella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

55787..56440
DNA (654bp) protein (218aa)
alkB; alpha-ketoglutarate-dependent dioxygenase AlkB (EC:1.14.11.-); K03919 alkylated DNA repair protein [EC:1.14.11.-]
Alpha-ketoglutarate-dependent dioxygenase AlkB n=1 Tax=Achromobacter arsenitoxydans SY8 RepID=H0FDE7_9BURK
Putative alkylated DNA repair protein AlkB {ECO:0000313|EMBL:KCV59053.1}; TaxID=1331202 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Bordetella.;" source="Bordetella bronchiseptica 99-R-0433.;"
scnpilot_solids1_trim150_scaffold_65_53
Alicycliphilus sp. B1, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(56631..57725)
DNA (1095bp) protein (365aa)
Ribosome-binding ATPase YchF n=1 Tax=Alicycliphilus denitrificans (strain DSM 18852 / JCM 14587 / BC) RepID=E8TR13_ALIDB rbh
GTP-binding protein YchF; K06942 rbh
Ribosome-binding ATPase YchF {ECO:0000256|HAMAP-Rule:MF_00944}; TaxID=1603291 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus sp. B1.;"
scnpilot_solids1_trim150_scaffold_65_54
GWA2_Burkholderiales_64_37_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(57826..58557)
DNA (732bp) protein (244aa)
Putative signal transduction protein (Fragment) n=1 Tax=Acidovorax delafieldii 2AN RepID=C5TAE5_ACIDE
serine/threonine protein kinase
Tax=GWA2_Burkholderiales_64_37_curated
scnpilot_solids1_trim150_scaffold_65_55
Variovorax paradoxus, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(58663..59532)
DNA (870bp) protein (290aa)
MOSC domain-containing protein n=1 Tax=Variovorax paradoxus B4 RepID=T1XG08_VARPD rbh
MOSC domain-containing protein rbh
MOSC domain-containing protein {ECO:0000313|EMBL:AGU51852.1}; TaxID=1246301 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax paradoxus B4.;"
scnpilot_solids1_trim150_scaffold_65_56
Alicycliphilus denitrificans, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

59584..60708
DNA (1125bp) protein (375aa)
Ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6 family n=1 Tax=Alicycliphilus denitrificans (strain DSM 18852 / JCM 14587 / BC) RepID=E8TR14_ALIDB rbh
ubiquinone biosynthesis hydroxylase, ubih/ubif/visc/coq6 family rbh
Ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6 family {ECO:0000313|EMBL:ADV01365.1}; TaxID=596153 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus denitrificans (strain DSM 18852 / JCM 14587 / BC).;"
scnpilot_solids1_trim150_scaffold_65_57
Alicycliphilus sp. B1, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

60745..61473
DNA (729bp) protein (243aa)
disulfide bond isomerase, DsbC/G; K03981 thiol:disulfide interchange protein DsbC [EC:5.3.4.1] rbh
Disulfide bond isomerase, DsbC/G-like protein n=2 Tax=Alicycliphilus denitrificans RepID=E8TR15_ALIDB rbh
Disulfide bond isomerase DsbC/G {ECO:0000313|EMBL:GAO24917.1}; TaxID=1603291 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus sp. B1.;"
scnpilot_solids1_trim150_scaffold_65_58
Acidovorax sp. MR-S7, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

61581..63341
DNA (1761bp) protein (587aa)
peptidase M61 n=1 Tax=Acidovorax sp. MR-S7 RepID=UPI00036A10C8
Predicted protease with the C-terminal PDZ domain {ECO:0000313|EMBL:GAD23779.1}; TaxID=1268622 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. MR-S7.;"
peptidase m61 domain-containing protein
scnpilot_solids1_trim150_scaffold_65_59
Acidovorax ebreus, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

63415..64194
DNA (780bp) protein (260aa)
enoyl-CoA hydratase/isomerase; K01692 enoyl-CoA hydratase [EC:4.2.1.17] rbh
Enoyl-CoA hydratase/isomerase n=1 Tax=Acidovorax ebreus (strain TPSY) RepID=B9MFL6_ACIET rbh
Enoyl-CoA hydratase/isomerase {ECO:0000313|EMBL:ACM34367.1}; TaxID=535289 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax ebreus (strain TPSY) (Diaphorobacter sp. (strain TPSY)).;"
scnpilot_solids1_trim150_scaffold_65_60
Frankia sp. EAN1pec, Frankia, Frankiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(64258..65475)
DNA (1218bp) protein (406aa)
membrane protein n=1 Tax=Corynebacterium-like bacterium B27 RepID=UPI0003B6CBBA rbh
low temperature requirement A rbh
Low temperature requirement A {ECO:0000313|EMBL:ABW11055.1}; TaxID=298653 species="Bacteria; Actinobacteria; Frankiales; Frankiaceae; Frankia.;" source="Frankia sp. (strain EAN1pec).;"
Displaying items 31-60 of 134 in total

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