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scnpilot_solids1_trim150_scaffold_65

Search features with annotation key words

Displaying items 1-30 of 134 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_solids1_trim150_scaffold_65_1
GWA2_Curvibacter_64_110_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

171..614
DNA (444bp) protein (148aa)
Transcription regulator MerR DNA binding protein n=2 Tax=Alicycliphilus denitrificans RepID=E8TSU1_ALIDB
transcription regulator merr DNA binding protein
Tax=GWA2_Curvibacter_64_110_curated
scnpilot_solids1_trim150_scaffold_65_2
Acidovorax sp. NO-1, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

671..1861
DNA (1191bp) protein (397aa)
Isovaleryl-CoA dehydrogenase n=1 Tax=Acidovorax sp. NO-1 RepID=H0BSS6_9BURK rbh
Isovaleryl-CoA dehydrogenase {ECO:0000313|EMBL:EHL24567.1}; TaxID=512030 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. NO-1.;"
isovaleryl-CoA dehydrogenase rbh
scnpilot_solids1_trim150_scaffold_65_3
Acidovorax sp. JS42, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1898..2560
DNA (663bp) protein (221aa)
carbonate dehydratase (EC:4.2.1.1); K01673 carbonic anhydrase [EC:4.2.1.1] rbh
Carbonic anhydrase {ECO:0000256|RuleBase:RU003956}; EC=4.2.1.1 {ECO:0000256|RuleBase:RU003956};; TaxID=232721 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. (strain JS42).;"
Carbonic anhydrase n=1 Tax=Acidovorax sp. (strain JS42) RepID=A1WCB2_ACISJ rbh
scnpilot_solids1_trim150_scaffold_65_4
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2632..3813
DNA (1182bp) protein (394aa)
acetyl-CoA acetyltransferase (EC:2.3.1.9); K00626 acetyl-CoA C-acetyltransferase [EC:2.3.1.9] id=12550639 bin=BDI species=Acidovorax sp. MR-S7 genus=Acidovorax taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=BDI organism_group=Betaproteobacteria rbh
acetyl-CoA acetyltransferase (EC:2.3.1.9); K00626 acetyl-CoA C-acetyltransferase [EC:2.3.1.9] rbh
Acetyl-CoA C-acetyltransferase {ECO:0000313|EMBL:EPD34980.1}; TaxID=883101 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia acidovorans CCUG 274B.;"
scnpilot_solids1_trim150_scaffold_65_5
Alicycliphilus sp. B1, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3884..5014
DNA (1131bp) protein (377aa)
butyryl-CoA dehydrogenase (EC:1.3.8.1); K00257 [EC:1.3.99.-] rbh
Acyl-CoA dehydrogenase domain-containing protein n=2 Tax=Alicycliphilus denitrificans RepID=E8TST5_ALIDB rbh
Acyl-CoA dehydrogenase protein {ECO:0000313|EMBL:GAO21425.1}; TaxID=1603291 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus sp. B1.;"
scnpilot_solids1_trim150_scaffold_65_6
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5038..5436
DNA (399bp) protein (133aa)
Uncharacterized protein n=1 Tax=Delftia acidovorans (strain DSM 14801 / SPH-1) RepID=A9C1E7_DELAS
hypothetical protein; K09858 SEC-C motif domain protein
Uncharacterized protein {ECO:0000313|EMBL:ABX38610.1}; TaxID=398578 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia acidovorans (strain DSM 14801 / SPH-1).;"
scnpilot_solids1_trim150_scaffold_65_7
R_Curvibacter_63_18, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5419..6417)
DNA (999bp) protein (333aa)
hypothetical protein n=1 Tax=Curvibacter lanceolatus RepID=UPI00037F8D96 rbh
AraC family transcriptional regulator
Tax=RIFCSPHIGHO2_12_FULL_Curvibacter_63_18_curated
scnpilot_solids1_trim150_scaffold_65_8
Alicycliphilus denitrificans, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6610..8322
DNA (1713bp) protein (571aa)
Long-chain-fatty-acid--CoA ligase (EC:6.2.1.3); K00666 fatty-acyl-CoA synthase [EC:6.2.1.-] rbh
Long-chain-fatty-acid--CoA ligase {ECO:0000313|EMBL:AEB86464.1}; EC=6.2.1.3 {ECO:0000313|EMBL:AEB86464.1};; TaxID=596154 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus denitrificans (strain DSM 14773 / CIP 107495 / K601).;"
Long-chain-fatty-acid--CoA ligase n=1 Tax=Alicycliphilus denitrificans (strain DSM 14773 / CIP 107495 / K601) RepID=F4G5Y3_ALIDK rbh
scnpilot_solids1_trim150_scaffold_65_9
Comamonas testosteroni, Comamonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8353..10143)
DNA (1791bp) protein (597aa)
Na+/H+ antiporter n=1 Tax=Comamonas testosteroni ATCC 11996 RepID=H1RKI8_COMTE rbh
Sodium:proton antiporter {ECO:0000313|EMBL:KGH12523.1}; TaxID=285 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Comamonas.;" source="Comamonas testosteroni (Pseudomonas testosteroni).;"
Na+/H+ antiporter; K03316 monovalent cation:H+ antiporter, CPA1 family rbh
scnpilot_solids1_trim150_scaffold_65_10
Alicycliphilus sp. B1, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10170..11777
DNA (1608bp) protein (536aa)
methylcrotonoyl-CoA carboxylase (EC:6.4.1.4); K01969 3-methylcrotonyl-CoA carboxylase beta subunit [EC:6.4.1.4] rbh
Methylcrotonoyl-CoA carboxylase n=1 Tax=Alicycliphilus denitrificans (strain DSM 18852 / JCM 14587 / BC) RepID=E8TSQ9_ALIDB rbh
Acetyl-CoA carboxylase {ECO:0000313|EMBL:GAO25070.1}; TaxID=1603291 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus sp. B1.;"
scnpilot_solids1_trim150_scaffold_65_11
R_Burkholderiales_69_20, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11820..12149
DNA (330bp) protein (110aa)
Uncharacterized protein n=1 Tax=Thiomonas arsenitoxydans (strain DSM 22701 / CIP 110005 / 3As) RepID=D6CMU1_THIA3
hypothetical protein
Tax=RIFCSPHIGHO2_12_FULL_Burkholderiales_69_20_curated
scnpilot_solids1_trim150_scaffold_65_12
R_Burkholderiales_69_20, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12136..12537
DNA (402bp) protein (134aa)
Ribonuclease VapC n=1 Tax=Thioflavicoccus mobilis 8321 RepID=L0GR01_9GAMM
nucleic acid-binding protein, contains PIN domain
Tax=RIFCSPHIGHO2_12_FULL_Burkholderiales_69_20_curated
scnpilot_solids1_trim150_scaffold_65_13
Acidovorax ebreus, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12595..13380
DNA (786bp) protein (262aa)
enoyl-CoA hydratase; K13766 methylglutaconyl-CoA hydratase [EC:4.2.1.18] rbh
Enoyl-CoA hydratase/isomerase n=1 Tax=Acidovorax ebreus (strain TPSY) RepID=B9MG80_ACIET rbh
Enoyl-CoA hydratase/isomerase {ECO:0000313|EMBL:ACM34475.1}; TaxID=535289 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax ebreus (strain TPSY) (Diaphorobacter sp. (strain TPSY)).;"
scnpilot_solids1_trim150_scaffold_65_14
Acidovorax sp. NO-1, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13405..14088
DNA (684bp) protein (228aa)
Putative uncharacterized protein n=1 Tax=Acidovorax sp. NO-1 RepID=H0C4X5_9BURK rbh
Putative uncharacterized protein {ECO:0000313|EMBL:EHL20354.1}; TaxID=512030 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. NO-1.;"
hypothetical protein rbh
scnpilot_solids1_trim150_scaffold_65_15
Acidovorax delafieldii, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14204..16249
DNA (2046bp) protein (682aa)
3-methylcrotonyl-CoA carboxylase subunit alpha n=1 Tax=Acidovorax radicis RepID=UPI0002376A72 rbh
3-methylcrotonoyl-CoA carboxylase subunit alpha rbh
Carbamoyl-phosphate synthase L chain ATP-binding {ECO:0000313|EMBL:EER61278.1}; TaxID=573060 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax delafieldii 2AN.;"
scnpilot_solids1_trim150_scaffold_65_16
Alicycliphilus denitrificans, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16263..17171
DNA (909bp) protein (303aa)
hydroxymethylglutaryl-CoA lyase (EC:4.1.3.4); K01640 hydroxymethylglutaryl-CoA lyase [EC:4.1.3.4]
Hydroxymethylglutaryl-CoA lyase {ECO:0000313|EMBL:AEB86458.1}; EC=4.1.3.4 {ECO:0000313|EMBL:AEB86458.1};; TaxID=596154 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus denitrificans (strain DSM 14773 / CIP 107495 / K601).;"
Pyruvate carboxyltransferase n=2 Tax=Alicycliphilus denitrificans RepID=E8TS28_ALIDB
scnpilot_solids1_trim150_scaffold_65_17
GWE1_Burkholderiales_65_30_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17179..17823
DNA (645bp) protein (215aa)
Lysine exporter protein (LYSE/YGGA) id=1269988 bin=GWE1_Burkholderiales_65_30 species=Variovorax paradoxus genus=Variovorax taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_Burkholderiales_65_30 organism_group=Betaproteobacteria
lysine exporter protein LysE/YggA; K05834 homoserine/homoserine lactone efflux protein
Tax=GWE1_Burkholderiales_65_30_curated
scnpilot_solids1_trim150_scaffold_65_18
Bordetella bronchiseptica, Bordetella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17852..18496
DNA (645bp) protein (215aa)
Uncharacterized protein n=2 Tax=Bordetella bronchiseptica RepID=K0MU27_BORBM
hypothetical protein
Ankyrin repeat protein {ECO:0000313|EMBL:KDD52728.1}; TaxID=1331242 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Bordetella.;" source="Bordetella bronchiseptica OSU553.;"
scnpilot_solids1_trim150_scaffold_65_19
Acidovorax sp. MR-S7, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18509..19018
DNA (510bp) protein (170aa)
prolyl-tRNA synthetase n=1 Tax=Acidovorax sp. MR-S7 RepID=UPI00037E10D8
Prolyl-tRNA synthetase {ECO:0000313|EMBL:GAD21741.1}; TaxID=1268622 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. MR-S7.;"
YbaK/prolyl-tRNA synthetase associated domain-containing protein
scnpilot_solids1_trim150_scaffold_65_20
Acidovorax sp. JS42, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19083..19676
DNA (594bp) protein (198aa)
DSBA oxidoreductase n=1 Tax=Acidovorax sp. (strain JS42) RepID=A1WC87_ACISJ
DSBA oxidoreductase
DSBA oxidoreductase {ECO:0000313|EMBL:ABM43862.1}; TaxID=232721 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. (strain JS42).;"
scnpilot_solids1_trim150_scaffold_65_21
BJP_08E140C01_Xanthomonadales_64_42, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19966..22995
DNA (3030bp) protein (1010aa)
hypothetical protein n=1 Tax=Limnohabitans sp. Rim28 RepID=UPI00035DFC8A
DNA methyltransferase
Tax=BJP_08E140C01_Xanthomonadales_64_42
scnpilot_solids1_trim150_scaffold_65_22
Burkholderia sp. Ch1-1, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23031..23324
DNA (294bp) protein (98aa)
Uncharacterized protein n=1 Tax=Burkholderia sp. Ch1-1 RepID=I2IE33_9BURK
Uncharacterized protein {ECO:0000313|EMBL:EIF28985.1}; TaxID=243261 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia.;" source="Burkholderia sp. Ch1-1.;"
hypothetical protein; K09803 hypothetical protein
scnpilot_solids1_trim150_scaffold_65_23
Burkholderia sp. Ch1-1, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23290..23604
DNA (315bp) protein (105aa)
Uncharacterized protein n=1 Tax=Burkholderia sp. Ch1-1 RepID=I2IE34_9BURK
Uncharacterized protein {ECO:0000313|EMBL:EIF28986.1}; TaxID=243261 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia.;" source="Burkholderia sp. Ch1-1.;"
hypothetical protein
scnpilot_solids1_trim150_scaffold_65_24
Alicycliphilus sp. B1, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23715..27563
DNA (3849bp) protein (1283aa)
Excinuclease ABC, A subunit n=1 Tax=Alicycliphilus denitrificans (strain DSM 14773 / CIP 107495 / K601) RepID=F4G5A0_ALIDK
UvrABC system protein A {ECO:0000256|SAAS:SAAS00088996}; TaxID=1603291 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus sp. B1.;"
excinuclease ABC subunit A; K03701 excinuclease ABC subunit A
scnpilot_solids1_trim150_scaffold_65_25
RIFOXYD12_FULL_Burkholderiales_59_19_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

27560..29788
DNA (2229bp) protein (743aa)
Excinuclease ABC, A subunit n=1 Tax=Variovorax paradoxus (strain EPS) RepID=E6V7B7_VARPE
excinuclease ABC subunit A; K03701 excinuclease ABC subunit A
Tax=RIFOXYD12_FULL_Burkholderiales_59_19_curated
scnpilot_solids1_trim150_scaffold_65_26
RLO_Burkholderiales_61_40, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

30008..30262
DNA (255bp) protein (85aa)
Prevent host death protein, Phd antitoxin n=1 Tax=Oxalobacteraceae bacterium IMCC9480 RepID=F1W353_9BURK
CopG family transcriptional regulator
Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_61_40_curated
scnpilot_solids1_trim150_scaffold_65_27
RLO_PLX_64_10, Bacteria

Not on your lists

30252..30527
DNA (276bp) protein (92aa)
Putative addiction module toxin RelE/StbE n=1 Tax=uncultured bacterium RepID=I6ZMC1_9BACT
addiction module antitoxin
Tax=RIFCSPLOWO2_12_FULL_PLX_64_10_curated
scnpilot_solids1_trim150_scaffold_65_28
Rhodoferax ferrireducens, Rhodoferax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(30647..31000)
DNA (354bp) protein (118aa)
Alkyl hydroperoxide reductase AhpD {ECO:0000256|SAAS:SAAS00088523}; EC=1.11.1.15 {ECO:0000256|SAAS:SAAS00088503};; TaxID=338969 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Rhodoferax.;" source="Rhodoferax ferrireducens (strain ATCC BAA-621 / DSM 15236 / T118); (Albidiferax ferrireducens).;"
Alkylhydroperoxidase n=1 Tax=Rhodoferax ferrireducens (strain DSM 15236 / ATCC BAA-621 / T118) RepID=Q21QX4_RHOFD
alkylhydroperoxidase
scnpilot_solids1_trim150_scaffold_65_29
Alicycliphilus denitrificans, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(31014..31400)
DNA (387bp) protein (129aa)
Uncharacterized protein n=1 Tax=Alicycliphilus denitrificans (strain DSM 14773 / CIP 107495 / K601) RepID=F4G598_ALIDK
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEB86444.1}; TaxID=596154 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus denitrificans (strain DSM 14773 / CIP 107495 / K601).;"
scnpilot_solids1_trim150_scaffold_65_30
Curvibacter putative symbiont of Hydra magnipapillata, Curvibacter, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(31460..32752)
DNA (1293bp) protein (431aa)
Putative uncharacterized protein n=1 Tax=Curvibacter putative symbiont of Hydra magnipapillata RepID=C9YBN9_9BURK rbh
Putative uncharacterized protein {ECO:0000313|EMBL:CBA30087.1}; TaxID=667019 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Curvibacter.;" source="Curvibacter putative symbiont of Hydra magnipapillata.;"
OsmC family protein; K06889; K07397 putative redox protein
Displaying items 1-30 of 134 in total

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