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scnpilot_solids1_trim150_scaffold_105

Search features with annotation key words

Displaying items 121-141 of 141 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_solids1_trim150_scaffold_105_120
Acidovorax sp. MR-S7, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(104464..105456)
DNA (993bp) protein (331aa)
porin n=1 Tax=Acidovorax sp. MR-S7 RepID=UPI000363D7D6 rbh
Porin {ECO:0000313|EMBL:GAD23203.1}; TaxID=1268622 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. MR-S7.;"
outer membrane porin protein rbh
scnpilot_solids1_trim150_scaffold_105_121
Alicycliphilus sp. B1, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(105501..106553)
DNA (1053bp) protein (351aa)
Substrate-binding region of ABC-type glycine betaine transport system n=2 Tax=Alicycliphilus denitrificans RepID=E8U2A1_ALIDB
Glycine/betaine ABC transporter substrate-binding protein {ECO:0000313|EMBL:GAO27006.1}; TaxID=1603291 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus sp. B1.;"
substrate-binding region of abc-type glycine betaine transport system; K02002 glycine betaine/proline transport system substrate-binding protein
scnpilot_solids1_trim150_scaffold_105_122
Acidovorax sp. MR-S7, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(106661..108127)
DNA (1467bp) protein (489aa)
hypothetical protein n=1 Tax=Acidovorax sp. MR-S7 RepID=UPI00036C215E rbh
Hydrolase of the alpha/beta superfamily {ECO:0000313|EMBL:GAD20825.1}; TaxID=1268622 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. MR-S7.;"
TM helix protein rbh
scnpilot_solids1_trim150_scaffold_105_123
Alicycliphilus sp. B1, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(108196..109206)
DNA (1011bp) protein (337aa)
Substrate-binding region of ABC-type glycine betaine transport system n=2 Tax=Alicycliphilus denitrificans RepID=E8U2A1_ALIDB rbh
Glycine/betaine ABC transporter substrate-binding protein {ECO:0000313|EMBL:GAO27006.1}; TaxID=1603291 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus sp. B1.;"
glycine/betaine ABC transporter substrate-binding protein; K02002 glycine betaine/proline transport system substrate-binding protein rbh
scnpilot_solids1_trim150_scaffold_105_124
Alicycliphilus sp. B1, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(109274..110362)
DNA (1089bp) protein (363aa)
Binding-protein-dependent transport systems inner membrane component n=2 Tax=Alicycliphilus denitrificans RepID=E8U2A2_ALIDB rbh
ABC transporter permease; K02001 glycine betaine/proline transport system permease protein rbh
Binding-protein-dependent transport system inner membrane protein {ECO:0000313|EMBL:GAO27007.1}; TaxID=1603291 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus sp. B1.;"
scnpilot_solids1_trim150_scaffold_105_125
Alicycliphilus denitrificans, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(110380..111669)
DNA (1290bp) protein (430aa)
glycine betaine/l-proline abc transporter, atpase subunit; K02000 glycine betaine/proline transport system ATP-binding protein [EC:3.6.3.32] rbh
Glycine betaine/L-proline ABC transporter, ATPase subunit n=2 Tax=Alicycliphilus denitrificans RepID=E8U2A3_ALIDB rbh
Glycine betaine/L-proline ABC transporter, ATPase subunit {ECO:0000313|EMBL:ADU98907.1}; TaxID=596153 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus denitrificans (strain DSM 18852 / JCM 14587 / BC).;"
scnpilot_solids1_trim150_scaffold_105_126
Acidovorax delafieldii, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

112368..113303
DNA (936bp) protein (312aa)
Glycosyl transferase family 2 n=1 Tax=Acidovorax delafieldii 2AN RepID=C5T5S2_ACIDE rbh
Glycosyl transferase family 2 {ECO:0000313|EMBL:EER60183.1}; TaxID=573060 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax delafieldii 2AN.;"
glycosyl transferase family protein rbh
scnpilot_solids1_trim150_scaffold_105_127
Acidovorax delafieldii, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

113300..113680
DNA (381bp) protein (127aa)
GtrA family protein n=1 Tax=Acidovorax delafieldii 2AN RepID=C5T5S1_ACIDE
GtrA family protein {ECO:0000313|EMBL:EER60182.1}; Flags: Precursor;; TaxID=573060 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax delafieldii 2AN.;"
GtrA-like protein
scnpilot_solids1_trim150_scaffold_105_128
Alicycliphilus sp. B1, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(113609..115186)
DNA (1578bp) protein (526aa)
Glycosyl transferase family 39 n=1 Tax=Acidovorax delafieldii 2AN RepID=C5T5S0_ACIDE
Glycosyl transferase, family 39 {ECO:0000313|EMBL:GAO22524.1}; TaxID=1603291 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus sp. B1.;"
glycosyl transferase family protein
scnpilot_solids1_trim150_scaffold_105_129
Acidovorax delafieldii, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(115183..116052)
DNA (870bp) protein (290aa)
YdjC family protein n=1 Tax=Acidovorax delafieldii 2AN RepID=C5T5R9_ACIDE
YdjC family protein {ECO:0000313|EMBL:EER60180.1}; TaxID=573060 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax delafieldii 2AN.;"
hypothetical protein
scnpilot_solids1_trim150_scaffold_105_130
Acidovorax sp. NO-1, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(116135..116683)
DNA (549bp) protein (183aa)
NUDIX hydrolase n=1 Tax=Acidovorax sp. NO-1 RepID=H0BW13_9BURK
NUDIX hydrolase {ECO:0000313|EMBL:EHL23392.1}; TaxID=512030 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. NO-1.;"
NUDIX hydrolase
scnpilot_solids1_trim150_scaffold_105_131
Alicycliphilus denitrificans, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(116721..117296)
DNA (576bp) protein (192aa)
Fumarylacetoacetate (FAA) hydrolase n=2 Tax=Alicycliphilus denitrificans RepID=E8U155_ALIDB
fumarylacetoacetate (FAA) hydrolase
Fumarylacetoacetate (FAA) hydrolase {ECO:0000313|EMBL:AEB84810.1}; TaxID=596154 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus denitrificans (strain DSM 14773 / CIP 107495 / K601).;"
scnpilot_solids1_trim150_scaffold_105_132
Acidovorax ebreus, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

117415..118284
DNA (870bp) protein (290aa)
Uncharacterized protein n=1 Tax=Acidovorax ebreus (strain TPSY) RepID=B9MIX1_ACIET rbh
hypothetical protein; K05810 conserved hypothetical protein rbh
Laccase domain protein {ECO:0000256|RuleBase:RU361274}; TaxID=535289 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax ebreus (strain TPSY) (Diaphorobacter sp. (strain TPSY)).;"
scnpilot_solids1_trim150_scaffold_105_133
Acidovorax sp. MR-S7, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(118171..118509)
DNA (339bp) protein (113aa)
UPI0003D3FC51 related cluster n=1 Tax=unknown RepID=UPI0003D3FC51
Uncharacterized protein {ECO:0000313|EMBL:GAD24121.1}; TaxID=1268622 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. MR-S7.;"
hypothetical protein
scnpilot_solids1_trim150_scaffold_105_134
Acidovorax sp. MR-S7, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

118591..120318
DNA (1728bp) protein (576aa)
poly(r)-hydroxyalkanoic acid synthase, class i; K03821 polyhydroxyalkanoate synthase [EC:2.3.1.-] rbh
poly(R)-hydroxyalkanoic acid synthase n=1 Tax=Acidovorax sp. MR-S7 RepID=UPI00036F59D2
Poly(3-hydroxyalkanoate) synthetase {ECO:0000313|EMBL:GAD24120.1}; TaxID=1268622 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. MR-S7.;"
scnpilot_solids1_trim150_scaffold_105_135
Acidovorax sp. MR-S7, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

120390..121571
DNA (1182bp) protein (394aa)
acetyl-CoA acetyltransferase (EC:2.3.1.9); K00626 acetyl-CoA C-acetyltransferase [EC:2.3.1.9] rbh
acetyl-CoA acetyltransferase n=1 Tax=Acidovorax sp. MR-S7 RepID=UPI000371AD4A rbh
Acetyl-CoA acetyltransferase {ECO:0000313|EMBL:GAD24119.1}; TaxID=1268622 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. MR-S7.;"
scnpilot_solids1_trim150_scaffold_105_136
Acidovorax delafieldii, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

121680..122417
DNA (738bp) protein (246aa)
Acetoacetyl-CoA reductase n=1 Tax=Acidovorax delafieldii 2AN RepID=C5TAD3_ACIDE
acetoacetyl-CoA reductase-like
Acetoacetyl-CoA reductase {ECO:0000313|EMBL:EER58560.1}; TaxID=573060 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax delafieldii 2AN.;"
scnpilot_solids1_trim150_scaffold_105_137
unknown

Not on your lists

comp(122505..122600)
DNA (96bp) protein (32aa)

This feature has no annotations

scnpilot_solids1_trim150_scaffold_105_138
Comamonas aquatica, Comamonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(122763..124706)
DNA (1944bp) protein (648aa)
ABC transporter related protein n=1 Tax=Alicycliphilus denitrificans (strain DSM 14773 / CIP 107495 / K601) RepID=F4GD58_ALIDK rbh
ABC transporter {ECO:0000313|EMBL:EXU81737.1}; TaxID=1457173 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Comamonas.;" source="Comamonas aquatica DA1877.;"
ABC transporter; K06158 ATP-binding cassette, subfamily F, member 3 rbh
scnpilot_solids1_trim150_scaffold_105_139
Acidovorax sp. KKS102, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(124777..125940)
DNA (1164bp) protein (388aa)
Twitching motility protein n=1 Tax=Acidovorax sp. KKS102 RepID=K0I1I2_9BURK rbh
twitching motility protein rbh
Twitching motility protein {ECO:0000313|EMBL:AFU46150.1}; TaxID=358220 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. KKS102.;"
scnpilot_solids1_trim150_scaffold_105_140
Acidovorax sp. MR-S7, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

126106..127611
DNA (1506bp) protein (502aa)
methyl-accepting chemotaxis protein n=1 Tax=Acidovorax sp. MR-S7 RepID=UPI00037648F2 rbh
Methyl-accepting chemotaxis protein {ECO:0000313|EMBL:GAD20396.1}; TaxID=1268622 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. MR-S7.;"
methyl-accepting chemotaxis sensory transducer rbh
Displaying items 121-141 of 141 in total

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