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scnpilot_solids1_trim150_scaffold_366

Search features with annotation key words

Displaying items 1-30 of 48 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_solids1_trim150_scaffold_366_1
Polaromonas naphthalenivorans, Polaromonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

132..2123
DNA (1992bp) protein (664aa)
TRAG family protein n=1 Tax=Polaromonas naphthalenivorans (strain CJ2) RepID=A1VUZ8_POLNA rbh
TRAG family protein {ECO:0000313|EMBL:ABM39476.1}; TaxID=365044 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Polaromonas.;" source="Polaromonas naphthalenivorans (strain CJ2).;"
conjugal transfer coupling protein TraG; K03205 type IV secretion system protein VirD4 rbh
scnpilot_solids1_trim150_scaffold_366_2
Polaromonas naphthalenivorans, Polaromonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2120..2584
DNA (465bp) protein (155aa)
CopG domain protein DNA-binding domain protein n=1 Tax=Polaromonas naphthalenivorans (strain CJ2) RepID=A1VUZ9_POLNA
CopG/DNA-binding domain-containing protein
CopG domain protein DNA-binding domain protein {ECO:0000313|EMBL:ABM39477.1}; TaxID=365044 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Polaromonas.;" source="Polaromonas naphthalenivorans (strain CJ2).;"
scnpilot_solids1_trim150_scaffold_366_3
GWA2_Burkholderiales_64_37_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2581..3696
DNA (1116bp) protein (372aa)
Type II secretion system protein E n=1 Tax=Polaromonas naphthalenivorans (strain CJ2) RepID=A1VV00_POLNA
type II secretion system protein E; K03196 type IV secretion system protein VirB11
Tax=GWA2_Burkholderiales_64_37_curated
scnpilot_solids1_trim150_scaffold_366_4
Polaromonas naphthalenivorans, Polaromonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3693..4049
DNA (357bp) protein (119aa)
Conjugal transfer protein TrbC n=1 Tax=Polaromonas naphthalenivorans (strain CJ2) RepID=A1VV01_POLNA
conjugal transfer protein TrbC; K03197 type IV secretion system protein VirB2
Conjugal transfer protein TrbC {ECO:0000313|EMBL:ABM39479.1}; Flags: Precursor;; TaxID=365044 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Polaromonas.;" source="Polaromonas naphthalenivorans (strain CJ2).;"
scnpilot_solids1_trim150_scaffold_366_5
Azotobacter vinelandii, Azotobacter, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4046..4330
DNA (285bp) protein (95aa)
P-type conjugative transfer protein TrbD n=3 Tax=Azotobacter vinelandii RepID=C1DR59_AZOVD
trbD; P-type conjugative transfer protein TrbD
P-type conjugative transfer protein TrbD {ECO:0000313|EMBL:AGK18886.1}; TaxID=1283331 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Azotobacter.;" source="Azotobacter vinelandii CA6.;"
scnpilot_solids1_trim150_scaffold_366_6
GWA2_Burkholderiales_64_37_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4352..6802
DNA (2451bp) protein (817aa)
AAA ATPase n=1 Tax=Polaromonas naphthalenivorans (strain CJ2) RepID=A1VV03_POLNA
conjugal transfer ATPase TrbE; K03199 type IV secretion system protein VirB4
Tax=GWA2_Burkholderiales_64_37_curated
scnpilot_solids1_trim150_scaffold_366_7
Burkholderia multivorans, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6799..7527
DNA (729bp) protein (243aa)
P-type conjugative transfer protein TrbJ n=2 Tax=Burkholderia multivorans RepID=A9AED2_BURM1 rbh
conjugal transfer protein TrbJ rbh
P-type conjugative transfer protein TrbJ {ECO:0000313|EMBL:EJO56661.1}; TaxID=985078 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia; Burkholderia cepacia complex.;" source="Burkholderia multivorans CF2.;"
scnpilot_solids1_trim150_scaffold_366_8
R_Pseudomonadales_64_12, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7538..7837
DNA (300bp) protein (100aa)
Lipoprotein n=1 Tax=Pseudomonas denitrificans ATCC 13867 RepID=M4XEP7_PSEDE
lipoprotein
Tax=RIFCSPHIGHO2_01_FULL_Pseudomonadales_64_12_curated
scnpilot_solids1_trim150_scaffold_366_9
Polaromonas naphthalenivorans, Polaromonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7834..9213
DNA (1380bp) protein (460aa)
TrbL/VirB6 plasmid conjugal transfer protein n=1 Tax=Polaromonas naphthalenivorans (strain CJ2) RepID=A1VV05_POLNA
conjugal transfer protein TrbL; K07344 type IV secretion system protein TrbL
TrbL/VirB6 plasmid conjugal transfer protein {ECO:0000313|EMBL:ABM39483.1}; TaxID=365044 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Polaromonas.;" source="Polaromonas naphthalenivorans (strain CJ2).;"
scnpilot_solids1_trim150_scaffold_366_10
Polaromonas naphthalenivorans, Polaromonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9226..9930
DNA (705bp) protein (235aa)
Conjugal transfer protein n=1 Tax=Polaromonas naphthalenivorans (strain CJ2) RepID=A1VV06_POLNA
conjugal transfer protein TrbF; K03200 type IV secretion system protein VirB5
Conjugal transfer protein {ECO:0000313|EMBL:ABM39484.1}; Flags: Precursor;; TaxID=365044 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Polaromonas.;" source="Polaromonas naphthalenivorans (strain CJ2).;"
scnpilot_solids1_trim150_scaffold_366_11
Polaromonas naphthalenivorans, Polaromonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9927..10922
DNA (996bp) protein (332aa)
Conjugal transfer protein TrbG/VirB9/CagX n=1 Tax=Polaromonas naphthalenivorans (strain CJ2) RepID=A1VV07_POLNA
conjugal transfer protein TrbG/VirB9/CagX; K03204 type IV secretion system protein VirB9
Conjugal transfer protein TrbG/VirB9/CagX {ECO:0000313|EMBL:ABM39485.1}; Flags: Precursor;; TaxID=365044 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Polaromonas.;" source="Polaromonas naphthalenivorans (strain CJ2).;"
scnpilot_solids1_trim150_scaffold_366_12
Polaromonas naphthalenivorans, Polaromonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10925..12214
DNA (1290bp) protein (430aa)
Conjugation TrbI family protein n=1 Tax=Polaromonas naphthalenivorans (strain CJ2) RepID=A1VV08_POLNA rbh
conjugation TrbI family protein; K03195 type IV secretion system protein VirB10 rbh
Conjugation TrbI family protein {ECO:0000313|EMBL:ABM39486.1}; TaxID=365044 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Polaromonas.;" source="Polaromonas naphthalenivorans (strain CJ2).;"
scnpilot_solids1_trim150_scaffold_366_13
Gammaproteobacteria bacterium BRH_c0, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12211..12486
DNA (276bp) protein (92aa)
Uncharacterized protein n=1 Tax=Cupriavidus sp. HMR-1 RepID=L2EMA0_9BURK
(Protein belongs to CMGI-3) {ECO:0000313|EMBL:KJS06157.1}; TaxID=1629722 species="Bacteria; Proteobacteria; Gammaproteobacteria.;" source="Gammaproteobacteria bacterium BRH_c0.;"
hypothetical protein
scnpilot_solids1_trim150_scaffold_366_14
Variovorax paradoxus, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12547..12831
DNA (285bp) protein (95aa)
Phage transcriptional regulator, AlpA n=1 Tax=Variovorax paradoxus (strain S110) RepID=C5CKX6_VARPS
phage transcriptional regulator AlpA
Phage transcriptional regulator, AlpA {ECO:0000313|EMBL:ACS21127.1}; TaxID=543728 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax paradoxus (strain S110).;"
scnpilot_solids1_trim150_scaffold_366_15
RLO_Burkholderiales_61_40, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12933..13922
DNA (990bp) protein (330aa)
Uncharacterized protein n=1 Tax=Variovorax paradoxus B4 RepID=T1XB34_VARPD rbh
hypothetical protein rbh
Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_61_40_curated
scnpilot_solids1_trim150_scaffold_366_16
RLO_Burkholderiales_61_40, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13916..14695
DNA (780bp) protein (260aa)
Uncharacterized protein n=1 Tax=Variovorax paradoxus B4 RepID=T1XBJ4_VARPD rbh
hypothetical protein rbh
Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_61_40_curated
scnpilot_solids1_trim150_scaffold_366_17
Acidovorax sp. CF316, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14846..15625
DNA (780bp) protein (260aa)
Exodeoxyribonuclease III n=1 Tax=Acidovorax sp. CF316 RepID=J1EGD5_9BURK rbh
Exodeoxyribonuclease III {ECO:0000313|EMBL:EJE51376.1}; Flags: Precursor;; TaxID=1144317 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. CF316.;"
exodeoxyribonuclease III Xth rbh
scnpilot_solids1_trim150_scaffold_366_18
Comamonas testosteroni, Comamonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15625..16143
DNA (519bp) protein (173aa)
protein tyrosine phosphatase; K01104 protein-tyrosine phosphatase [EC:3.1.3.48]
Protein tyrosine phosphatase n=1 Tax=Comamonas testosteroni KF-1 RepID=B7WWB0_COMTE
Phosphotyrosine protein phosphatase {ECO:0000313|EMBL:AIJ48709.1}; TaxID=1392005 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Comamonas.;" source="Comamonas testosteroni TK102.;"
scnpilot_solids1_trim150_scaffold_366_19
Acidovorax sp. JS42, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16136..16609)
DNA (474bp) protein (158aa)
Conserved hypothetical signal peptide protein n=1 Tax=Acidovorax sp. (strain JS42) RepID=A1W597_ACISJ
putative signal peptide protein
Conserved hypothetical signal peptide protein {ECO:0000313|EMBL:ABM41422.1}; Flags: Precursor;; TaxID=232721 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. (strain JS42).;"
scnpilot_solids1_trim150_scaffold_366_20
Alicycliphilus sp. B1, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16690..18105)
DNA (1416bp) protein (472aa)
glutamine synthetase, type I (EC:6.3.1.2); K01915 glutamine synthetase [EC:6.3.1.2] rbh
Glutamine synthetase {ECO:0000256|RuleBase:RU004356}; EC=6.3.1.2 {ECO:0000256|RuleBase:RU004356};; TaxID=1603291 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus sp. B1.;"
Glutamine synthetase n=2 Tax=Alicycliphilus denitrificans RepID=E8TWV4_ALIDB rbh
scnpilot_solids1_trim150_scaffold_366_21
Acidovorax sp. MR-S7, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18182..19003)
DNA (822bp) protein (274aa)
damage-inducible protein n=1 Tax=Acidovorax sp. MR-S7 RepID=UPI0003614E9D rbh
Predicted nucleotide-utilizing enzyme related to molybdopterin-biosynthesis enzyme MoeA {ECO:0000313|EMBL:GAD24901.1}; TaxID=1268622 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. MR-S7.;"
molybdopterin binding domain protein rbh
scnpilot_solids1_trim150_scaffold_366_22
Acidovorax ebreus, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19000..19878)
DNA (879bp) protein (293aa)
Putative transmembrane protein n=1 Tax=Acidovorax ebreus (strain TPSY) RepID=B9MFZ3_ACIET rbh
hypothetical protein rbh
Putative transmembrane protein {ECO:0000313|EMBL:ACM32584.1}; TaxID=535289 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax ebreus (strain TPSY) (Diaphorobacter sp. (strain TPSY)).;"
scnpilot_solids1_trim150_scaffold_366_23
Hylemonella gracilis, Hylemonella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19919..20821)
DNA (903bp) protein (301aa)
Putative uncharacterized protein n=1 Tax=Hylemonella gracilis ATCC 19624 RepID=F3KUY1_9BURK rbh
Uncharacterized protein {ECO:0000313|EMBL:EGI76405.1}; TaxID=887062 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hylemonella.;" source="Hylemonella gracilis ATCC 19624.;"
C alpha-dehydrogenase-like rbh
scnpilot_solids1_trim150_scaffold_366_24
Acidovorax ebreus, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20831..21847)
DNA (1017bp) protein (339aa)
Alcohol dehydrogenase zinc-binding domain protein n=1 Tax=Acidovorax ebreus (strain TPSY) RepID=B9MA90_ACIET rbh
alcohol dehydrogenase zinc-binding domain-containing protein; K07119 rbh
Alcohol dehydrogenase zinc-binding domain protein {ECO:0000313|EMBL:ACM33462.1}; TaxID=535289 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax ebreus (strain TPSY) (Diaphorobacter sp. (strain TPSY)).;"
scnpilot_solids1_trim150_scaffold_366_25
Acidovorax sp. NO-1, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21935..22348)
DNA (414bp) protein (138aa)
Putative uncharacterized protein n=1 Tax=Acidovorax sp. NO-1 RepID=H0BW81_9BURK
Putative uncharacterized protein {ECO:0000313|EMBL:EHL23460.1}; TaxID=512030 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. NO-1.;"
hypothetical protein
scnpilot_solids1_trim150_scaffold_366_26
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22354..23145)
DNA (792bp) protein (264aa)
gluconate 5-dehydrogenase (EC:1.1.1.69); K00046 gluconate 5-dehydrogenase [EC:1.1.1.69] rbh
Gluconate 5-dehydrogenase n=1 Tax=Delftia acidovorans CCUG 15835 RepID=S2XNY4_DELAC rbh
Short chain dehydrogenase family protein {ECO:0000313|EMBL:KFJ11025.1}; TaxID=80866 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia acidovorans (Pseudomonas acidovorans) (Comamonas acidovorans).;"
scnpilot_solids1_trim150_scaffold_366_27
Alicycliphilus sp. B1, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23275..24141
DNA (867bp) protein (289aa)
glutamate racemase (EC:5.1.1.3); K01776 glutamate racemase [EC:5.1.1.3] rbh
Glutamate racemase {ECO:0000256|HAMAP-Rule:MF_00258, ECO:0000256|SAAS:SAAS00031911}; EC=5.1.1.3 {ECO:0000256|HAMAP-Rule:MF_00258};; TaxID=1603291 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus sp. B1.;"
Glutamate racemase n=2 Tax=Alicycliphilus denitrificans RepID=E8TU93_ALIDB rbh
scnpilot_solids1_trim150_scaffold_366_28
Acidovorax sp. JS42, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24145..24774)
DNA (630bp) protein (210aa)
Uncharacterized protein n=1 Tax=Acidovorax ebreus (strain TPSY) RepID=B9MG64_ACIET rbh
hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:ABM42781.1}; TaxID=232721 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. (strain JS42).;"
scnpilot_solids1_trim150_scaffold_366_29
Cupriavidus sp. SK-4, Cupriavidus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

25031..27526
DNA (2496bp) protein (832aa)
heavy metal translocating p-type ATPase; K01533 Cu2+-exporting ATPase [EC:3.6.3.4] rbh
Cation-transporting ATPase transmembrane protein n=1 Tax=Pseudomonas aeruginosa VRFPA06 RepID=V8H2M6_PSEAI rbh
ATPase {ECO:0000313|EMBL:EYS92818.1}; TaxID=574750 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Cupriavidus.;" source="Cupriavidus sp. SK-4.;"
scnpilot_solids1_trim150_scaffold_366_30
Alicycliphilus denitrificans, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

27765..28967
DNA (1203bp) protein (401aa)
Phage integrase family protein n=7 Tax=Proteobacteria RepID=A1W957_ACISJ rbh
int; integrase family protein rbh
Integrase family protein {ECO:0000313|EMBL:AEB84011.1}; TaxID=596154 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus denitrificans (strain DSM 14773 / CIP 107495 / K601).;"
Displaying items 1-30 of 48 in total

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