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scnpilot_solids1_trim150_scaffold_105_1

Organism: SCNPILOT_SOLID_1_TRIM150_Burkholderiales_66_126

near complete RP 51 / 55 MC: 1 BSCG 48 / 51 ASCG 13 / 38
Location: comp(1..1809)

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma factor RpoD n=1 Tax=Alicycliphilus denitrificans (strain DSM 14773 / CIP 107495 / K601) RepID=F4GCJ4_ALIDK similarity UNIREF
DB: UNIREF100
  • Identity: 82.2
  • Coverage: 618.0
  • Bit_score: 967
  • Evalue 6.80e-279
  • rbh
RNA polymerase sigma-710 subunit RpoD; K03086 RNA polymerase primary sigma factor similarity KEGG
DB: KEGG
  • Identity: 82.2
  • Coverage: 618.0
  • Bit_score: 967
  • Evalue 2.10e-279
  • rbh
RNA polymerase sigma factor RpoD {ECO:0000256|HAMAP-Rule:MF_00963}; Sigma-70 {ECO:0000256|HAMAP-Rule:MF_00963}; TaxID=596154 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus denitrificans (strain DSM 14773 / CIP 107495 / K601).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 82.2
  • Coverage: 618.0
  • Bit_score: 967
  • Evalue 9.50e-279

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Taxonomy

Alicycliphilus denitrificans → Alicycliphilus → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1809
ATGCCCGCTCGAAAATCCGCCATGCCCGCTGCCACTGCCGCCAAGGCCGGTGACACGCCCGCCGAAGAAAAGACGAAGAAATCCGCCGCCGCCAAGGAGGCCGCCGCGGAATCCGCCACCAGGAAGCGCGCCAGCAAAAAGGCTGACGCCGCCGCGGCCAAGCCTGCCAAGGCAGGAAAGGCAAGCGGCAAGGGCGCCGTGAAGGGCAAGGGCAAGAAGGGCGTGGAAGAAGACGATACCGACCTGTCGGATGTCGAAGCGGACCTGGAAGGCGAACCCGAAGCCGTAGAAGCCGCGGTTGAGACACCCGTCGAAAAGGTCAAGCCGCTGCGCATGAAGATCAGCAAGGCCAAGGAGCGGGCCTTGATGAAGGAATTCGGCCTGGATGAAACCATCCTTTCCGAAGAAGACATGGCCAAGCGCCGCGCCCAGCTCAAGAAGCTGATCACGCTGGGCAAGACGCGCGGCTACCTCACGCAGGGCGAAATTTCCGACCACCTGCCGGACAAGCTGGTGGACGCAGAAACCATGGAAGCCGTGGCCTCGCTGCTCAGCGACATGGGCGTGGCCATCTACGAACAGACCCCCGACGCCGAAACGCTGTTCCAGAACAACGTCACGCCCACGGCCACCACGGTCGAAGAGGCCGAGGAAGAAGCCGAAGCGGCGCTGTCCACCGTGGACAGCGAATTCGGCCGCACCACCGACCCGGTGCGCATGTACATGCGCGAGATGGGCACGGTGGAGCTGCTCACGCGCGAGGGCGAGATCGAGATCGCCAAGCGCATCGAGGGCGGCCTGATGGACATGATGGAGGCGATCAGCGCCTCGCCCGCGACCATCGCCGAGATCCTCAACATGGGCGAGGAAATCCGCGCCGGCAAGGTCGTCATCAACACGGTGGTCGATGGTTTTGCCGACCCTGAGGAAGCCGACGACTACGTGGCCGAGGAAGACTTCGACGAGTACGACGAAGAGGACGACGACGACGGCAAGGGCGGCTCCAAGGCGATGACGCGCCTGCTGGAAAAGCTCAAGGGCGATGCGATGGAGCGCTTTGACGAGCTGCGCGCGCACTTCGAGAAGATGCACAGGATCTACGACAAGGAGGGCTACGGCACGCCTGGGTACATGAAGGTGCAGCGCGAAATTTCATCCAAGCTGATGTCCATCCGCTTCACCGCCAAGACCATCGAAAAATTGTGCGACATGGTGCGCGCGCAGGTCGACGACGTGCGCAAGAAAGAGCGCGAACTGCGCCGCATCATCGTGGACAAGTGCGGCATGCCGCAGGAAACCTTCATCAAGGAATTCCCGCCCAACCTGCTGAACCTGCACTGGGTGGAAAAGCAGGCCGGCGCCGGCAAGCCCTGGAGCACCATCATGGGGCGCAACATCCCCCCGATCCAGGAACTGCAGCAGAACCTGATCGACCTGCAGACCCGCGTGGTCGTGCCGCTGCTGGAGCTCAAGGCCATCCACAAGCGCATGAACGACGGCGAGCGTGCCAGCCGCCATGCCAAGAAGGAAATGATCGAGGCCAACCTGCGCCTGGTCATCAGCATCGCCAAGAAGTACACCAACCGCGGCCTGCAGTTCCTCGATCTGATCCAGGAGGGCAACATCGGCCTGATGAAGGCGGTGGACAAGTTCGAATACCGCCGCGGCTACAAGTTCTCGACCTACGCCACCTGGTGGATCCGCCAGGCCATCACGCGCTCGATCGCCGACCAGGCGCGCACCATCCGCATCCCGGTGCACATGATCGAGACCATCAACAAGATGAACCGCATCTCGCGCCAGCACCTG
PROTEIN sequence
Length: 603
MPARKSAMPAATAAKAGDTPAEEKTKKSAAAKEAAAESATRKRASKKADAAAAKPAKAGKASGKGAVKGKGKKGVEEDDTDLSDVEADLEGEPEAVEAAVETPVEKVKPLRMKISKAKERALMKEFGLDETILSEEDMAKRRAQLKKLITLGKTRGYLTQGEISDHLPDKLVDAETMEAVASLLSDMGVAIYEQTPDAETLFQNNVTPTATTVEEAEEEAEAALSTVDSEFGRTTDPVRMYMREMGTVELLTREGEIEIAKRIEGGLMDMMEAISASPATIAEILNMGEEIRAGKVVINTVVDGFADPEEADDYVAEEDFDEYDEEDDDDGKGGSKAMTRLLEKLKGDAMERFDELRAHFEKMHRIYDKEGYGTPGYMKVQREISSKLMSIRFTAKTIEKLCDMVRAQVDDVRKKERELRRIIVDKCGMPQETFIKEFPPNLLNLHWVEKQAGAGKPWSTIMGRNIPPIQELQQNLIDLQTRVVVPLLELKAIHKRMNDGERASRHAKKEMIEANLRLVISIAKKYTNRGLQFLDLIQEGNIGLMKAVDKFEYRRGYKFSTYATWWIRQAITRSIADQARTIRIPVHMIETINKMNRISRQHL