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scnpilot_solids1_trim150_scaffold_82_20

Organism: SCNPILOT_SOLID_1_TRIM150_Burkholderiales_66_126

near complete RP 51 / 55 MC: 1 BSCG 48 / 51 ASCG 13 / 38
Location: 21871..22605

Top 3 Functional Annotations

Value Algorithm Source
LuxR family transcriptional regulator n=1 Tax=Variovorax paradoxus RepID=UPI0003721B48 similarity UNIREF
DB: UNIREF100
  • Identity: 47.1
  • Coverage: 240.0
  • Bit_score: 190
  • Evalue 2.80e-45
Variovorax paradoxus strain MEDvA23 contig_136, whole genome shotgun sequence {ECO:0000313|EMBL:KIQ16136.1}; TaxID=34073 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax paradoxus.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 49.3
  • Coverage: 227.0
  • Bit_score: 188
  • Evalue 1.50e-44
two component LuxR family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 45.8
  • Coverage: 240.0
  • Bit_score: 187
  • Evalue 5.60e-45

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Taxonomy

Variovorax paradoxus → Variovorax → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 735
ATGATCCCCACCCATTCCGAGGCATTCGCCTCCGTCGACAGGCGCCCTGCGCCGCGCGGTGCGGGGCGCGACCCATGCGCCATCCTTCTGGTGGACGACCACGAACTGGTGCGCCTGGGGTTTCGGGCCCTGCTGGCGGAGCAGCCGCGCGAAGCGGGCCAGCCGGCGCTGGCCATCCACGAAGCGGACACGCTCGCCCAGGCCCTCGCGCTCTACCAGGGCAACGCAGCCGACATCGCCGTCGTGGTGCTGGATCTCACGCTGCGCGACAGCCACGGGCTGGATACGCTGATCGCCCTGCGCCAGGCCTGTCCGGATGCCACGGTGGTGGTGCTTTCGGGCACGGCAAGTCCGTCGACGGCCCGCGATGCACTGGCGCTCGGCGCGGTCGCGTTCTTCCCCAAGACCGGGGATCTCAGCCACATGCTGGAATTCGTGCGCACCTGCGCGCTGCGGGGTGCGCAGGCCGCGCAGCGAATGCAGCGTGCGCCCCTGCATCCCTGCGACAGCCTGACCCGCCTGGCCACCTCGCCAGACCCGATGGCAGATGCGGGCAGCCAGCTCACCGCGCGCCAGCTGCAGACCCTGCAATGGGTGCTGGAAGGCAAGTCCAACCGGGAAATCGGCGAGATCACCTGCCTGTCGGAGGGCACCGTGAAAAACCACGTCTCCATGCTGCTGCTGTCGTTTGCCGTGCGCTCGCGGGCGCAGCTGATCGCCAAATTGCGCGGCTGA
PROTEIN sequence
Length: 245
MIPTHSEAFASVDRRPAPRGAGRDPCAILLVDDHELVRLGFRALLAEQPREAGQPALAIHEADTLAQALALYQGNAADIAVVVLDLTLRDSHGLDTLIALRQACPDATVVVLSGTASPSTARDALALGAVAFFPKTGDLSHMLEFVRTCALRGAQAAQRMQRAPLHPCDSLTRLATSPDPMADAGSQLTARQLQTLQWVLEGKSNREIGEITCLSEGTVKNHVSMLLLSFAVRSRAQLIAKLRG*