ggKbase home page

scnpilot_solids1_trim150_scaffold_65_61

Organism: SCNPILOT_SOLID_1_TRIM150_Burkholderiales_66_126

near complete RP 51 / 55 MC: 1 BSCG 48 / 51 ASCG 13 / 38
Location: 65783..66370

Top 3 Functional Annotations

Value Algorithm Source
oligoribonuclease; K13288 oligoribonuclease [EC:3.1.-.-] id=5079919 bin=GWF1_Burkholderiales_GWF1_66_17 species=Hydrogenophaga sp. PBC genus=Hydrogenophaga taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWF1_Burkholderiales_GWF1_66_17 organism_group=Betaproteobacteria organism_desc="Control" bin for RuBisCO paper Leave in GW2011 GOOD similarity UNIREF
DB: UNIREF100
  • Identity: 79.2
  • Coverage: 202.0
  • Bit_score: 322
  • Evalue 3.70e-85
  • rbh
Exonuclease RNase T and DNA polymerase III; K13288 oligoribonuclease [EC:3.1.-.-] similarity KEGG
DB: KEGG
  • Identity: 77.1
  • Coverage: 192.0
  • Bit_score: 311
  • Evalue 1.60e-82
Tax=GWE1_Burkholderiales_65_30_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 79.2
  • Coverage: 202.0
  • Bit_score: 322
  • Evalue 5.20e-85

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

GWE1_Burkholderiales_65_30_curated → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 588
ATGACGGCCATGACTGAACCCACTTTGGCCGCAGCAGCGGCATTGGCCAAATCCGACCAGAACCTGGTCTGGCTGGACTGCGAAATGTCGGGCCTTGAACCCGAAAAAGAGCGCCTGCTGGAGATTGCCATCATCGCCACCGGCCCGCAGCTCACGCCGCGCGTGGAGGGCCCGGTGCTGGTCATTCACCAGAGTGATGAATTGCTGAACGCGATGGACGCCTGGAACAAAGGCACGCACGGCAAAAGCGGCCTCATCGACAAGGTGCGTGCCAGCACGCTTACCGAAGCGCAGGCCGAGGAAGAAATCCTCAAGTTCATCAAGCGCTACGTGCCCAAGAACAGCACCCCCATGTGCGGCAACACCATAGGGCAGGATCGGCGCTTTCTGGTGAAGTACATGCCCAGGCTGGAGGCGTATTTCCACTACCGCAACATCGACGTGAGCACGCTCAAGGAACTGGCCAAGCGCTGGAAGCCTGCGGTTGCCGAATCCTTCAAGAAGGCGCAGAAACACACCGCATTGGCGGATGTGCATGAATCCATCGACGAGCTGGAACACTACCGCAGGCATTTTCTGCAGGCTTGA
PROTEIN sequence
Length: 196
MTAMTEPTLAAAAALAKSDQNLVWLDCEMSGLEPEKERLLEIAIIATGPQLTPRVEGPVLVIHQSDELLNAMDAWNKGTHGKSGLIDKVRASTLTEAQAEEEILKFIKRYVPKNSTPMCGNTIGQDRRFLVKYMPRLEAYFHYRNIDVSTLKELAKRWKPAVAESFKKAQKHTALADVHESIDELEHYRRHFLQA*