ggKbase home page

scnpilot_solids1_trim150_scaffold_10555

Search features with annotation key words

Displaying 5 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_solids1_trim150_scaffold_10555_1
Rubrivivax gelatinosus, Rubrivivax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2..382
DNA (381bp) protein (127aa)
Diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(S) n=1 Tax=Rubrivivax gelatinosus (strain NBRC 100245 / IL144) RepID=I0HWB3_RUBGI
PAS/PAC and GAF sensor-containing diguanylate cyclase/phosphodiesterase
Diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(S) {ECO:0000313|EMBL:BAL97300.1}; TaxID=983917 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Rubrivivax.;" source="Rubrivivax gelatinosus (strain NBRC 100245 / IL144).;"
scnpilot_solids1_trim150_scaffold_10555_trna_1
unknown

Not on your lists

comp(499..570)
DNA (72bp)
transferRNA Val
scnpilot_solids1_trim150_scaffold_10555_2
Acidovorax avenae, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(594..1334)
DNA (741bp) protein (247aa)
DNA polymerase III subunit epsilon (EC:2.7.7.7); K02342 DNA polymerase III subunit epsilon [EC:2.7.7.7] rbh
DNA polymerase III, epsilon subunit {ECO:0000313|EMBL:ADX46676.1}; EC=2.7.7.7 {ECO:0000313|EMBL:ADX46676.1};; TaxID=643561 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax avenae (strain ATCC 19860 / DSM 7227 / JCM 20985 / NCPPB; 1011).;"
DNA polymerase III, epsilon subunit n=1 Tax=Acidovorax avenae (strain ATCC 19860 / DSM 7227 / JCM 20985 / NCPPB 1011) RepID=F0Q392_ACIAP rbh
scnpilot_solids1_trim150_scaffold_10555_3
R_Burkholderiales_69_20, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1336..1773)
DNA (438bp) protein (146aa)
FeS cluster assembly scaffold IscU n=2 Tax=Acidovorax RepID=A1TPY1_ACIAC
FeS cluster assembly scaffold IscU; K04488 nitrogen fixation protein NifU and related proteins
Tax=RIFCSPHIGHO2_12_FULL_Burkholderiales_69_20_curated
scnpilot_solids1_trim150_scaffold_10555_4
Verminephrobacter eiseniae, Verminephrobacter, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1755..2774)
DNA (1020bp) protein (340aa)
cysteine desulfurase IscS; K04487 cysteine desulfurase [EC:2.8.1.7]
Cysteine desulfurase IscS {ECO:0000256|HAMAP-Rule:MF_00331, ECO:0000256|SAAS:SAAS00038344}; EC=2.8.1.7 {ECO:0000256|HAMAP-Rule:MF_00331, ECO:0000256|SAAS:SAAS00063383};; TaxID=391735 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Verminephrobacter.;" source="Verminephrobacter eiseniae (strain EF01-2).;"
cysteine desulfurase n=1 Tax=Verminephrobacter aporrectodeae RepID=UPI0002375024
Displaying 5 items

View Taxonomy