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scnpilot_solids1_trim150_scaffold_268

Search features with annotation key words

Displaying items 1-30 of 77 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_solids1_trim150_scaffold_268_1
Castellaniella defragrans, Castellaniella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2..334
DNA (333bp) protein (111aa)
Ureidoglycolate lyase {ECO:0000256|HAMAP-Rule:MF_00616, ECO:0000256|SAAS:SAAS00181913}; EC=4.3.2.3 {ECO:0000256|HAMAP-Rule:MF_00616, ECO:0000256|SAAS:SAAS00181913};; Ureidoglycolatase {ECO:0000256|HAMAP-Rule:MF_00616}; TaxID=1437824 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Castellaniella.;" source="Castellaniella defragrans 65Phen.;"
allA; ureidoglycolate hydrolase (EC:3.5.3.19); K01483 ureidoglycolate hydrolase [EC:3.5.3.19]
Ureidoglycolate lyase n=1 Tax=Thauera sp. 63 RepID=N6XAA4_9RHOO
scnpilot_solids1_trim150_scaffold_268_2
Castellaniella defragrans, Castellaniella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(581..1294)
DNA (714bp) protein (238aa)
ABC transporter ATP-binding protein n=1 Tax=Bradyrhizobium japonicum RepID=UPI0003654159 rbh
Branched-chain amino acid transport ATP-binding protein LivF {ECO:0000313|EMBL:CDM22716.1}; TaxID=1437824 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Castellaniella.;" source="Castellaniella defragrans 65Phen.;"
ABC transporter ATP-binding protein; K01996 branched-chain amino acid transport system ATP-binding protein rbh
scnpilot_solids1_trim150_scaffold_268_3
Castellaniella defragrans, Castellaniella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1291..2052)
DNA (762bp) protein (254aa)
ABC transporter ATP-binding protein n=1 Tax=Pandoraea sp. SD6-2 RepID=R7X256_9BURK
ABC transporter ATP-binding protein {ECO:0000313|EMBL:CDM22715.1}; TaxID=1437824 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Castellaniella.;" source="Castellaniella defragrans 65Phen.;"
ATP-binding domain-containing protein; K01995 branched-chain amino acid transport system ATP-binding protein
scnpilot_solids1_trim150_scaffold_268_4
Castellaniella defragrans, Castellaniella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2054..3034)
DNA (981bp) protein (327aa)
ABC transporter permease n=2 Tax=Pandoraea RepID=V5UAC8_9BURK rbh
Branched-chain amino acid transport system permease protein LivM {ECO:0000313|EMBL:CDM22714.1}; TaxID=1437824 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Castellaniella.;" source="Castellaniella defragrans 65Phen.;"
branched-chain amino acid transport permease; K01998 branched-chain amino acid transport system permease protein rbh
scnpilot_solids1_trim150_scaffold_268_5
Castellaniella defragrans, Castellaniella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3051..3971)
DNA (921bp) protein (307aa)
Inner-membrane translocator n=1 Tax=Achromobacter piechaudii HLE RepID=J4J5Z3_9BURK rbh
High-affinity branched-chain amino acid transport system permease protein LivH {ECO:0000313|EMBL:CDM22713.1}; TaxID=1437824 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Castellaniella.;" source="Castellaniella defragrans 65Phen.;"
High-affinity branched-chain amino acid transport system permease protein LivH (TC 3.A.1.4.1 rbh
scnpilot_solids1_trim150_scaffold_268_6
Castellaniella defragrans, Castellaniella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4035..5204)
DNA (1170bp) protein (390aa)
Extracellular ligand-binding receptor n=1 Tax=Pandoraea sp. SD6-2 RepID=R7X203_9BURK rbh
Extracellular ligand-binding receptor {ECO:0000313|EMBL:CDM22712.1}; TaxID=1437824 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Castellaniella.;" source="Castellaniella defragrans 65Phen.;"
extracellular ligand-binding receptor; K01999 branched-chain amino acid transport system substrate-binding protein rbh
scnpilot_solids1_trim150_scaffold_268_7
Castellaniella defragrans, Castellaniella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5255..6043)
DNA (789bp) protein (263aa)
4-oxalocrotonate decarboxylase {ECO:0000313|EMBL:CDM22711.1}; EC=4.1.1.77 {ECO:0000313|EMBL:CDM22711.1};; TaxID=1437824 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Castellaniella.;" source="Castellaniella defragrans 65Phen.;"
nahK; 4-oxalocrotonate decarboxylase (EC:4.1.1.77); K01617 4-oxalocrotonate decarboxylase [EC:4.1.1.77] rbh
4-oxalocrotonate decarboxylase n=1 Tax=Thauera linaloolentis 47Lol = DSM 12138 RepID=N6XRY3_9RHOO rbh
scnpilot_solids1_trim150_scaffold_268_8
Castellaniella defragrans, Castellaniella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6056..6841)
DNA (786bp) protein (262aa)
4-oxalocrotonate decarboxylase {ECO:0000313|EMBL:CDM22710.1}; EC=4.1.1.77 {ECO:0000313|EMBL:CDM22710.1};; TaxID=1437824 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Castellaniella.;" source="Castellaniella defragrans 65Phen.;"
nahL; 2-oxopent-4-enoate hydratase (EC:4.2.1.80); K02554 2-keto-4-pentenoate hydratase [EC:4.2.1.80]
2-keto-4-pentenoate hydratase n=1 Tax=Azoarcus toluclasticus RepID=UPI00036AFBD8
scnpilot_solids1_trim150_scaffold_268_9
Castellaniella defragrans, Castellaniella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6853..7845)
DNA (993bp) protein (331aa)
2-amino-3-carboxymuconate-6-semialdehyde decarboxylase {ECO:0000313|EMBL:CDM22709.1}; EC=4.1.1.45 {ECO:0000313|EMBL:CDM22709.1};; TaxID=1437824 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Castellaniella.;" source="Castellaniella defragrans 65Phen.;"
2-amino-3-carboxymuconate-6-semialdehyde decarboxylase (EC:4.1.1.45) rbh
2-amino-3-carboxymuconate 6-semialdehyde decarboxylase n=1 Tax=Achromobacter xylosoxidans AXX-A RepID=F7SX12_ALCXX rbh
scnpilot_solids1_trim150_scaffold_268_10
Castellaniella defragrans, Castellaniella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7888..8460)
DNA (573bp) protein (191aa)
3-hydroxyanthranilate 3,4-dioxygenase (EC:1.13.11.6)
hypothetical protein n=1 Tax=Oligella urethralis RepID=UPI00037392AC
3-hydroxyanthranilic acid dioxygenase {ECO:0000313|EMBL:CDM22708.1}; TaxID=1437824 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Castellaniella.;" source="Castellaniella defragrans 65Phen.;"
scnpilot_solids1_trim150_scaffold_268_11
Castellaniella defragrans, Castellaniella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8540..8965)
DNA (426bp) protein (142aa)
2-aminomuconate deaminase {ECO:0000313|EMBL:CDM22707.1}; EC=3.5.99.5 {ECO:0000313|EMBL:CDM22707.1};; TaxID=1437824 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Castellaniella.;" source="Castellaniella defragrans 65Phen.;"
endoribonuclease L-PSP; K15067 2-aminomuconate deaminase [EC:3.5.99.5]
2-aminomuconate deaminase n=1 Tax=Pseudomonas fluorescens RepID=UPI0002DED3F7
scnpilot_solids1_trim150_scaffold_268_12
Castellaniella defragrans, Castellaniella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9000..10493)
DNA (1494bp) protein (498aa)
aldehyde dehydrogenase; K10217 aminomuconate-semialdehyde dehydrogenase [EC:1.2.1.32] rbh
2-hydroxymuconic semialdehyde dehydrogenase n=1 Tax=Pandoraea pnomenusa 3kgm RepID=V5PQC5_9BURK rbh
Aldehyde dehydrogenase {ECO:0000313|EMBL:CDM22706.1}; TaxID=1437824 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Castellaniella.;" source="Castellaniella defragrans 65Phen.;"
scnpilot_solids1_trim150_scaffold_268_13
Castellaniella defragrans, Castellaniella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10574..11521)
DNA (948bp) protein (316aa)
Bacterial regulatory helix-turn-helix protein, LysR family protein 178 n=1 Tax=Achromobacter xylosoxidans (strain A8) RepID=E3HXI8_ACHXA
Transcriptional regulator, LysR family {ECO:0000313|EMBL:CDM22699.1}; TaxID=1437824 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Castellaniella.;" source="Castellaniella defragrans 65Phen.;"
LysR family transcriptional regulator
scnpilot_solids1_trim150_scaffold_268_14
Castellaniella defragrans, Castellaniella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11534..12457)
DNA (924bp) protein (308aa)
Uncharacterized protein n=1 Tax=Thauera linaloolentis 47Lol = DSM 12138 RepID=N6YSL6_9RHOO rbh
Permease of the drug/metabolite transporter superfamily {ECO:0000313|EMBL:CDM22698.1}; TaxID=1437824 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Castellaniella.;" source="Castellaniella defragrans 65Phen.;"
hypothetical protein rbh
scnpilot_solids1_trim150_scaffold_268_15
Castellaniella defragrans, Castellaniella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12454..13371)
DNA (918bp) protein (306aa)
LysR family transcriptional regulator n=1 Tax=Alcaligenes faecalis subsp. faecalis NCIB 8687 RepID=J0UMR4_ALCFA rbh
Transcriptional regulator, LysR family, in glycolate utilization operon {ECO:0000313|EMBL:CDM22697.1}; TaxID=1437824 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Castellaniella.;" source="Castellaniella defragrans 65Phen.;"
LysR family transcriptional regulator rbh
scnpilot_solids1_trim150_scaffold_268_16
Castellaniella defragrans, Castellaniella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13593..15374
DNA (1782bp) protein (594aa)
Glyoxylate carboligase {ECO:0000313|EMBL:CDM22696.1}; EC=4.1.1.47 {ECO:0000313|EMBL:CDM22696.1};; TaxID=1437824 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Castellaniella.;" source="Castellaniella defragrans 65Phen.;"
glyoxylate carboligase; K01608 tartronate-semialdehyde synthase [EC:4.1.1.47] rbh
Glyoxylate carboligase n=2 Tax=Thauera RepID=N6XIT2_9RHOO rbh
scnpilot_solids1_trim150_scaffold_268_17
Castellaniella defragrans, Castellaniella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15438..16214
DNA (777bp) protein (259aa)
Hydroxypyruvate isomerase {ECO:0000256|PIRNR:PIRNR006241, ECO:0000313|EMBL:CDM22695.1}; EC=5.3.1.22 {ECO:0000256|PIRNR:PIRNR006241, ECO:0000313|EMBL:CDM22695.1};; TaxID=1437824 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Castellaniella.;" source="Castellaniella defragrans 65Phen.;"
hydroxypyruvate isomerase (EC:5.3.1.22) rbh
Hydroxypyruvate isomerase n=1 Tax=Variovorax paradoxus B4 RepID=T1XF85_VARPD rbh
scnpilot_solids1_trim150_scaffold_268_18
Castellaniella defragrans, Castellaniella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16299..17183
DNA (885bp) protein (295aa)
2-hydroxy-3-oxopropionate reductase {ECO:0000313|EMBL:CDM22694.1}; EC=1.1.1.60 {ECO:0000313|EMBL:CDM22694.1};; TaxID=1437824 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Castellaniella.;" source="Castellaniella defragrans 65Phen.;"
2-hydroxy-3-oxopropionate reductase (EC:1.1.1.60); K00042 2-hydroxy-3-oxopropionate reductase [EC:1.1.1.60] rbh
2-hydroxy-3-oxopropionate reductase n=1 Tax=Thauera phenylacetica B4P RepID=N7A0U3_9RHOO rbh
scnpilot_solids1_trim150_scaffold_268_19
Castellaniella defragrans, Castellaniella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17347..18606
DNA (1260bp) protein (420aa)
hydroxypyruvate reductase; K00050 hydroxypyruvate reductase [EC:1.1.1.81] rbh
Hydroxypyruvate reductase n=1 Tax=Pseudogulbenkiania sp. (strain NH8B) RepID=G2IVD5_PSEUL rbh
D-glycerate 2-kinase {ECO:0000313|EMBL:CDM22693.1}; TaxID=1437824 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Castellaniella.;" source="Castellaniella defragrans 65Phen.;"
scnpilot_solids1_trim150_scaffold_268_20
Castellaniella defragrans, Castellaniella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18632..19075
DNA (444bp) protein (148aa)
Uncharacterized protein, possibly involved in utilization of glycolate or propanediol n=1 Tax=Aromatoleum aromaticum (strain EbN1) RepID=Q5P1S5_AROAE
Uncharacterized protein {ECO:0000313|EMBL:CDM22692.1}; TaxID=1437824 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Castellaniella.;" source="Castellaniella defragrans 65Phen.;"
glcG; hypothetical protein
scnpilot_solids1_trim150_scaffold_268_21
Castellaniella defragrans, Castellaniella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19072..20490
DNA (1419bp) protein (473aa)
Pyruvate kinase {ECO:0000256|RuleBase:RU000504, ECO:0000313|EMBL:CDM22691.1}; EC=2.7.1.40 {ECO:0000256|RuleBase:RU000504, ECO:0000313|EMBL:CDM22691.1};; TaxID=1437824 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Castellaniella.;" source="Castellaniella defragrans 65Phen.;"
pyruvate kinase; K00873 pyruvate kinase [EC:2.7.1.40] rbh
Pyruvate kinase n=1 Tax=Thauera linaloolentis 47Lol = DSM 12138 RepID=N6YQG9_9RHOO rbh
scnpilot_solids1_trim150_scaffold_268_22
Pusillimonas sp. T7-7, Pusillimonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20656..21561)
DNA (906bp) protein (302aa)
GntR family transcriptional regulator n=1 Tax=Pusillimonas sp. (strain T7-7) RepID=F4GMQ7_PUSST rbh
GntR family transcriptional regulator rbh
GntR family transcriptional regulator {ECO:0000313|EMBL:AEC21530.1}; TaxID=1007105 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Pusillimonas.;" source="Pusillimonas sp. (strain T7-7).;"
scnpilot_solids1_trim150_scaffold_268_23
BJP_08E140C01_Clostridiales_46_19, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

21736..22509
DNA (774bp) protein (258aa)
cyclase n=1 Tax=Brevibacillus sp. phR RepID=UPI000317FDE6
cyclase
Tax=BJP_08E140C01_Clostridiales_46_19
scnpilot_solids1_trim150_scaffold_268_24
Azospirillum brasilense, Azospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22542..23999
DNA (1458bp) protein (486aa)
Uncharacterized protein n=1 Tax=Azospirillum brasilense Sp245 RepID=G8AU50_AZOBR rbh
hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:CCD01459.1}; TaxID=1064539 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Azospirillum.;" source="Azospirillum brasilense Sp245.;"
scnpilot_solids1_trim150_scaffold_268_25
Variovorax paradoxus, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24026..24661)
DNA (636bp) protein (212aa)
Uncharacterized protein n=1 Tax=Variovorax paradoxus B4 RepID=T1X6J7_VARPD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGU48188.1}; TaxID=1246301 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax paradoxus B4.;"
scnpilot_solids1_trim150_scaffold_268_26
Azoarcus sp. KH32C, Azoarcus, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24666..25394)
DNA (729bp) protein (243aa)
Asp/Glu/hydantoin racemase n=1 Tax=Azoarcus sp. KH32C RepID=H0PSB4_9RHOO rbh
Asp/Glu/hydantoin racemase rbh
Asp/Glu/hydantoin racemase {ECO:0000313|EMBL:BAL24053.1}; TaxID=748247 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Azoarcus.;" source="Azoarcus sp. KH32C.;"
scnpilot_solids1_trim150_scaffold_268_27
Pusillimonas sp. T7-7, Pusillimonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(25440..26738)
DNA (1299bp) protein (433aa)
Uncharacterized protein n=1 Tax=Pusillimonas sp. (strain T7-7) RepID=F4GMQ9_PUSST rbh
hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:AEC21532.1}; TaxID=1007105 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Pusillimonas.;" source="Pusillimonas sp. (strain T7-7).;"
scnpilot_solids1_trim150_scaffold_268_28
Pusillimonas sp. T7-7, Pusillimonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(26731..27363)
DNA (633bp) protein (211aa)
Uncharacterized protein n=1 Tax=Pusillimonas sp. (strain T7-7) RepID=F4GMR0_PUSST
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEC21533.1}; TaxID=1007105 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Pusillimonas.;" source="Pusillimonas sp. (strain T7-7).;"
scnpilot_solids1_trim150_scaffold_268_29
Pusillimonas sp. T7-7, Pusillimonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(27386..28456)
DNA (1071bp) protein (357aa)
Putative extracellular solute-binding protein n=1 Tax=Pusillimonas sp. (strain T7-7) RepID=F4GMR1_PUSST rbh
extracellular solute-binding protein rbh
Putative extracellular solute-binding protein {ECO:0000313|EMBL:AEC21534.1}; TaxID=1007105 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Pusillimonas.;" source="Pusillimonas sp. (strain T7-7).;"
scnpilot_solids1_trim150_scaffold_268_30
Pusillimonas sp. T7-7, Pusillimonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

28853..30256
DNA (1404bp) protein (468aa)
dihydropyrimidinase; K01464 dihydropyrimidinase [EC:3.5.2.2] rbh
Dihydropyrimidinase n=1 Tax=Pusillimonas sp. (strain T7-7) RepID=F4GMR2_PUSST rbh
Dihydropyrimidinase {ECO:0000313|EMBL:AEC21535.1}; TaxID=1007105 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Pusillimonas.;" source="Pusillimonas sp. (strain T7-7).;"
Displaying items 1-30 of 77 in total

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