ggKbase home page

scnpilot_solids1_trim150_scaffold_26_5

Organism: SCNPILOT_SOLID_1_TRIM150_Castellaniella_66_22

near complete RP 52 / 55 BSCG 51 / 51 ASCG 13 / 38
Location: 4277..5794

Top 3 Functional Annotations

Value Algorithm Source
Lysine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00252, ECO:0000256|RuleBase:RU000336}; EC=6.1.1.6 {ECO:0000256|HAMAP-Rule:MF_00252, ECO:0000256|RuleBase:RU000336};; Lysyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00252}; TaxID=1437824 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Castellaniella.;" source="Castellaniella defragrans 65Phen.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 88.2
  • Coverage: 507.0
  • Bit_score: 891
  • Evalue 7.30e-256
lysS; lysyl-tRNA synthetase (EC:6.1.1.6); K04567 lysyl-tRNA synthetase, class II [EC:6.1.1.6] similarity KEGG
DB: KEGG
  • Identity: 78.7
  • Coverage: 497.0
  • Bit_score: 794
  • Evalue 2.70e-227
  • rbh
Lysine--tRNA ligase n=1 Tax=Alcaligenes faecalis subsp. faecalis NCIB 8687 RepID=J0JH77_ALCFA similarity UNIREF
DB: UNIREF100
  • Identity: 78.1
  • Coverage: 502.0
  • Bit_score: 801
  • Evalue 4.10e-229
  • rbh

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Castellaniella defragrans → Castellaniella → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1518
ATGACCGCGCAGACCGAATCCCAAACCTCCGACGAAAACCGCCTGATCGCCGAACGGCGCGCCAAGCTGGCCAGCCTGCGCGAGGCCGGCCCCGCCTATCCCAACGACTTCCGCCCCGACAGCCATGCCGCCACCCTGCGCGAGGACTGCGATGCGCTGGACGCGGACGCCCTGCTGGCCCTGAACCGCCGCGCCTGCGTGGCCGGGCGCATGATGCTCAAGCGCGTCATGGGCAAGGCCAGCTTCGCCACGATCCAGGACGCCAGCGGCCGCCTGCAGCTGTACCTGGACCGGAGCGTGCTGGGCGACGAGACCTACGCGGCCTTCAAGTCCTGGGACATCGGCGACATCGTGGGCGCCGAGGGCCAGGTCTTCAAGACCCACAAGGGCGAACTGTCGCTACGCGTGGAATCGCTGCGCCTGCTGTCGAAATCCCTGCGCCCCCTGCCCGACAAGTTCCACGGCGTCGCCGACCAGGAACTGCGCTACCGCCAGCGCTACGTCGATCTGGTCATGACCCAGGAAACGCGCCAGACCTTCGTGGCCCGCAGCCGGATCGTCACCGCCATCCGCCAGATCATGTCGGACGCCGACTTCCTGGAAGTCGAAACCCCGATGCTGCATCCGATCCCCGGGGGCGCCGCCGCCAAGCCCTTCATCACGCACCACAACGCGCTGGACATGGACATGTACCTGCGCATCGCTCCGGAACTGTATCTGAAGCGCCTGATCGTCGGCGGCTTCGAGCGGGTCTTCGAGATCAACCGCAACTTCCGCAACGAAGGGGTCAGCCCGCGCCACAATCCCGAATTCACGATGATGGAATTCTATGCGGCGTACACCGACTACCGCTGGCTGATGGACTACACGGAATCCCTGATCCGCGACACGGCGCTGCGCGTCTGCGGCACGACCGACCTCGTCTACCAGGGCCAGCCCCTGGACCTGGGCCGCGCCTTCGACCGTCTGACCATCACCGAAGCCATCCTGAAATACGCGCCGGCCTATACGGCCGAACAACTGCAGGACATCGACTTCCTGCGCCGGGACCTGCGCCGCCTGGGCGCCGACATCGACGGCCCCGTGCTGGCCCATGCGGGCCTGGGCGCCCTGCAGCTGGCCCTGTTCGAGGAAACGGCCGAAGCCCTGCTCTGGCACCCGACCTTCATCATCGACTACCCGGTCGAGGTCTCGCCGCTGGCCCGGGCGTCCGACACCCAGCCCGGCATCACGGAACGCTTCGAGCTGTTCGCCTGCGGCCGTGAAATCGCCAACGGCTTTTCCGAACTGAACGATCCGGAAGATCAAGCCGCCCGGTTCCAGGCCCAGGTGGCCGCCAAGGACGCCGGCGACGAGGAAGCCATGTACTACGACGCCGATTACGTGCGGGCGCTGGAATACGGCATGCCGCCCACCGGCGGCTGCGGCATCGGCATCGACCGTCTGGTCATGATGCTGACCGACAGCCCCAACATCCGCGACGTGATCCTGTTCCCGCACCTGCGCCGCGAAGACTGA
PROTEIN sequence
Length: 506
MTAQTESQTSDENRLIAERRAKLASLREAGPAYPNDFRPDSHAATLREDCDALDADALLALNRRACVAGRMMLKRVMGKASFATIQDASGRLQLYLDRSVLGDETYAAFKSWDIGDIVGAEGQVFKTHKGELSLRVESLRLLSKSLRPLPDKFHGVADQELRYRQRYVDLVMTQETRQTFVARSRIVTAIRQIMSDADFLEVETPMLHPIPGGAAAKPFITHHNALDMDMYLRIAPELYLKRLIVGGFERVFEINRNFRNEGVSPRHNPEFTMMEFYAAYTDYRWLMDYTESLIRDTALRVCGTTDLVYQGQPLDLGRAFDRLTITEAILKYAPAYTAEQLQDIDFLRRDLRRLGADIDGPVLAHAGLGALQLALFEETAEALLWHPTFIIDYPVEVSPLARASDTQPGITERFELFACGREIANGFSELNDPEDQAARFQAQVAAKDAGDEEAMYYDADYVRALEYGMPPTGGCGIGIDRLVMMLTDSPNIRDVILFPHLRRED*