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scnpilot_solids1_trim150_scaffold_109

Search features with annotation key words

Displaying items 31-60 of 100 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_solids1_trim150_scaffold_109_31
RHI_Sphingopyxis_65_19, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

37510..38532
DNA (1023bp) protein (341aa)
Uncharacterized protein n=1 Tax=Phenylobacterium zucineum (strain HLK1) RepID=B4RDY9_PHEZH
hypothetical protein
Tax=RIFCSPHIGHO2_12_FULL_Sphingopyxis_65_19_curated
scnpilot_solids1_trim150_scaffold_109_32
Sphingomonas sp. MM-1, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

38543..39523
DNA (981bp) protein (327aa)
hypothetical protein n=1 Tax=Singularimonas variicoloris RepID=UPI00036AB6BE
mandelate racemase/muconate lactonizing protein
Mandelate racemase/muconate lactonizing protein {ECO:0000313|EMBL:AGH50963.1}; TaxID=745310 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. MM-1.;"
scnpilot_solids1_trim150_scaffold_109_33
Rhodococcus sp. AD45, Rhodococcus, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(39590..40726)
DNA (1137bp) protein (379aa)
D-alanyl-D-alanine carboxypeptidase {ECO:0000313|EMBL:KJF23420.1}; EC=3.4.16.4 {ECO:0000313|EMBL:KJF23420.1};; TaxID=103808 species="Bacteria; Actinobacteria; Corynebacteriales; Nocardiaceae; Rhodococcus.;" source="Rhodococcus sp. AD45.;"
Putative beta-lactamase n=1 Tax=Rhodococcus equi (strain 103S) RepID=E4WIC9_RHOE1 rbh
beta-lactamase rbh
scnpilot_solids1_trim150_scaffold_109_34
Xanthomonas fragariae, Xanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

41263..44148
DNA (2886bp) protein (962aa)
TonB-dependent receptor n=1 Tax=Xanthomonas fragariae LMG 25863 RepID=R0E605_9XANT
TonB-dependent receptor {ECO:0000313|EMBL:ENZ96251.1}; TaxID=1131451 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Xanthomonas.;" source="Xanthomonas fragariae LMG 25863.;"
putative TonB dependent receptor protein
scnpilot_solids1_trim150_scaffold_109_35
Stenotrophomonas rhizophila, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

44338..46296
DNA (1959bp) protein (653aa)
peptidase S9 n=1 Tax=Stenotrophomonas maltophilia RepID=UPI00037BAB4B rbh
Peptidase S9 {ECO:0000313|EMBL:AHY59854.1}; TaxID=216778 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas.;" source="Stenotrophomonas rhizophila.;"
prolyl oligopeptidase family protein rbh
scnpilot_solids1_trim150_scaffold_109_36
Stenotrophomonas rhizophila, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(46367..48217)
DNA (1851bp) protein (617aa)
MFS transporter n=1 Tax=Stenotrophomonas maltophilia RepID=UPI0002D57CAB rbh
MFS transporter {ECO:0000313|EMBL:AHY59853.1}; TaxID=216778 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas.;" source="Stenotrophomonas rhizophila.;"
Di-/tripeptide transporter; K03305 proton-dependent oligopeptide transporter, POT family rbh
scnpilot_solids1_trim150_scaffold_109_37
Pseudoxanthomonas suwonensis, Pseudoxanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

48380..50341
DNA (1962bp) protein (654aa)
peptide transporter n=1 Tax=Pseudoxanthomonas sp. GW2 RepID=UPI000305CE2C rbh
oligopeptide transporter OPT family rbh
Oligopeptide transporter, OPT family {ECO:0000313|EMBL:ADV26669.1}; TaxID=743721 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Pseudoxanthomonas.;" source="Pseudoxanthomonas suwonensis (strain 11-1).;"
scnpilot_solids1_trim150_scaffold_109_38
Stenotrophomonas sp. RIT309, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

50488..52554
DNA (2067bp) protein (689aa)
putative exported peptidase (EC:3.4.14.-) rbh
Alanyl dipeptidyl peptidase n=1 Tax=Stenotrophomonas maltophilia EPM1 RepID=M3G4V3_STEMA rbh
Peptidase, S9A/B/C family, catalytic domain protein {ECO:0000313|EMBL:EZP45980.1}; TaxID=1470590 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas.;" source="Stenotrophomonas sp. RIT309.;"
scnpilot_solids1_trim150_scaffold_109_39
Xanthomonas sp. Nyagatare, Xanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

52816..54069
DNA (1254bp) protein (418aa)
membrane protein n=1 Tax=Xanthomonas arboricola RepID=UPI0002D4A129 rbh
Membrane protein {ECO:0000313|EMBL:KGK56295.1}; TaxID=1552758 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Xanthomonas.;" source="Xanthomonas sp. Nyagatare.;"
hypothetical protein rbh
scnpilot_solids1_trim150_scaffold_109_40
Stenotrophomonas maltophilia, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

54228..55481
DNA (1254bp) protein (418aa)
Uncharacterized protein n=2 Tax=Stenotrophomonas maltophilia RepID=B4SRM4_STRM5 rbh
hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:ACF52688.1}; TaxID=391008 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas; Stenotrophomonas maltophilia group.;" source="Stenotrophomonas maltophilia (strain R551-3).;"
scnpilot_solids1_trim150_scaffold_109_41
Pseudoxanthomonas spadix, Pseudoxanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(55576..55800)
DNA (225bp) protein (75aa)
hypothetical protein n=1 Tax=Xanthomonas sacchari RepID=UPI000262B0CF
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AER55945.1}; TaxID=1045855 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Pseudoxanthomonas.;" source="Pseudoxanthomonas spadix (strain BD-a59).;"
scnpilot_solids1_trim150_scaffold_109_42
Lysobacter daejeonensis, Lysobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(55800..57866)
DNA (2067bp) protein (689aa)
Carbon starvation protein CstA n=1 Tax=Pseudoxanthomonas suwonensis (strain 11-1) RepID=E6WR01_PSEUU rbh
Carbon starvation protein A {ECO:0000313|EMBL:KGM53487.1}; TaxID=1385517 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Lysobacter.;" source="Lysobacter daejeonensis GH1-9.;"
carbon starvation protein CstA; K06200 carbon starvation protein rbh
scnpilot_solids1_trim150_scaffold_109_43
Stenotrophomonas sp. SKA14, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

58098..58949
DNA (852bp) protein (284aa)
Pirin n=1 Tax=Stenotrophomonas sp. SKA14 RepID=B8L6J5_9GAMM rbh
Pirin {ECO:0000313|EMBL:EED39752.1}; TaxID=391601 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas.;" source="Stenotrophomonas sp. SKA14.;"
Pirin; K06911 rbh
scnpilot_solids1_trim150_scaffold_109_44
Stenotrophomonas rhizophila, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(58999..59460)
DNA (462bp) protein (154aa)
Putative secreted protein n=3 Tax=Xanthomonas campestris pv. campestris RepID=B0RQR4_XANCB
Uncharacterized protein {ECO:0000313|EMBL:AHY58147.1}; TaxID=216778 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas.;" source="Stenotrophomonas rhizophila.;"
hypothetical protein
scnpilot_solids1_trim150_scaffold_109_45
Stenotrophomonas rhizophila, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(59688..60410)
DNA (723bp) protein (241aa)
Aquaporin Z n=2 Tax=Xanthomonadaceae RepID=T5KTF6_STEMA rbh
Aquaporin Z {ECO:0000256|HAMAP-Rule:MF_01146}; TaxID=216778 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas.;" source="Stenotrophomonas rhizophila.;"
MIP family channel protein; K06188 aquaporin Z rbh
scnpilot_solids1_trim150_scaffold_109_46
Xanthomonas sacchari, Xanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(60500..61360)
DNA (861bp) protein (287aa)
pirin n=1 Tax=Stenotrophomonas maltophilia RepID=UPI0002EEED7F rbh
Pirin {ECO:0000313|EMBL:AJC47887.1}; TaxID=56458 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Xanthomonas.;" source="Xanthomonas sacchari.;"
pirin; K06911 rbh
scnpilot_solids1_trim150_scaffold_109_47
Xanthomonas gardneri, Xanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(61450..62130)
DNA (681bp) protein (227aa)
Endonuclease V {ECO:0000256|HAMAP-Rule:MF_00801}; EC=3.1.21.7 {ECO:0000256|HAMAP-Rule:MF_00801};; Deoxyinosine 3'endonuclease {ECO:0000256|HAMAP-Rule:MF_00801}; Deoxyribonuclease V {ECO:0000256|HAMAP-Rule:MF_00801}; Flags: Precursor;; TaxID=925777 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Xanthomonas.;" source="Xanthomonas gardneri ATCC 19865.;"
endonuclease V (EC:3.1.21.7); K05982 deoxyribonuclease V [EC:3.1.21.7]
Endonuclease V n=1 Tax=Xanthomonas gardneri ATCC 19865 RepID=F0CDT2_9XANT
scnpilot_solids1_trim150_scaffold_109_48
Stenotrophomonas maltophilia, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

62231..62980
DNA (750bp) protein (250aa)
2,3-bisphosphoglycerate-independent phosphoglycerate mutase (EC:5.4.2.4); K01834 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.1] rbh
2,3-bisphosphoglycerate-dependent phosphoglycerate mutase {ECO:0000256|HAMAP-Rule:MF_01039, ECO:0000256|RuleBase:RU004512}; Short=BPG-dependent PGAM {ECO:0000256|HAMAP-Rule:MF_01039};; Short=PGAM {ECO:0000256|HAMAP-Rule:MF_01039};; Short=Phosphoglyceromutase {ECO:0000256|HAMAP-Rule:MF_01039};; Short=dPGM {ECO:0000256|HAMAP-Rule:MF_01039};; EC=5.4.2.11 {ECO:0000256|HAMAP-Rule:MF_01039, ECO:0000256|RuleBase:RU004512};; TaxID=1163399 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xant
2,3-bisphosphoglycerate-dependent phosphoglycerate mutase n=2 Tax=Stenotrophomonas maltophilia RepID=G0K335_STEMA rbh
scnpilot_solids1_trim150_scaffold_109_49
Rhodanobacter fulvus, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(63056..63445)
DNA (390bp) protein (130aa)
XRE family transcriptional regulator n=1 Tax=Rhodanobacter fulvus Jip2 RepID=I4VLE0_9GAMM
XRE family transcriptional regulator {ECO:0000313|EMBL:EIL88031.1}; TaxID=1163408 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter fulvus Jip2.;"
hypothetical protein
scnpilot_solids1_trim150_scaffold_109_50
Sulfuritalea hydrogenivorans, Sulfuritalea, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

63704..64075
DNA (372bp) protein (124aa)
Cyclic diguanosine monophosphate-binding protein n=1 Tax=Azospira oryzae (strain ATCC BAA-33 / DSM 13638 / PS) RepID=G8QPN3_AZOSU
Cyclic diguanosine monophosphate-binding protein {ECO:0000256|PIRNR:PIRNR028141}; Short=c-di-GMP-binding protein {ECO:0000256|PIRNR:PIRNR028141};; Pilz domain-containing protein {ECO:0000256|PIRNR:PIRNR028141}; TaxID=1223802 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Sulfuritalea.;" source="Sulfuritalea hydrogenivorans sk43H.;"
PilZ domain-containing protein
scnpilot_solids1_trim150_scaffold_109_51
R_Burkholderiales_67_14, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

64265..64744
DNA (480bp) protein (160aa)
3-demethylubiquinone-9 3-methyltransferase; K00568 2-polyprenyl-6-hydroxyphenyl methylase / 3-demethylubiquinone-9 3-methyltransferase [EC:2.1.1.222 2.1.1.64]
3-demethylubiquinone-9 3-methyltransferase n=1 Tax=Dyella ginsengisoli RepID=UPI00034AAE3C rbh
Tax=RifCSPlowO2_12_Burkholderiales_67_14_curated
scnpilot_solids1_trim150_scaffold_109_52
Stenotrophomonas maltophilia, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

64872..66971
DNA (2100bp) protein (700aa)
peptidase, m13 family; K07386 putative endopeptidase [EC:3.4.24.-] rbh
Putative endopeptidase n=1 Tax=Stenotrophomonas maltophilia SKK35 RepID=M5CKN5_STEMA rbh
Putative peptidase {ECO:0000313|EMBL:CAQ44970.1}; TaxID=522373 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas; Stenotrophomonas maltophilia group.;" source="Stenotrophomonas maltophilia (strain K279a).;"
scnpilot_solids1_trim150_scaffold_109_53
Deinococcus geothermalis, Deinococcus, Deinococcales, Deinococci, Deinococcus-Thermus, Bacteria

Not on your lists

comp(67148..67477)
DNA (330bp) protein (110aa)
hypothetical protein n=1 Tax=Comamonas sp. B-9 RepID=UPI000395B751
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABF45511.1}; TaxID=319795 species="Bacteria; Deinococcus-Thermus; Deinococci; Deinococcales; Deinococcaceae; Deinococcus.;" source="Deinococcus geothermalis (strain DSM 11300).;"
scnpilot_solids1_trim150_scaffold_109_54
Arenimonas donghaensis, Arenimonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(67474..67917)
DNA (444bp) protein (148aa)
Uncharacterized protein {ECO:0000313|EMBL:KFL36408.1}; TaxID=1121014 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Arenimonas.;" source="Arenimonas donghaensis DSM 18148 = HO3-R19.;"
scnpilot_solids1_trim150_scaffold_109_55
Kineosphaera limosa, Kineosphaera, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

68126..69625
DNA (1500bp) protein (500aa)
Cardiolipin synthetase n=1 Tax=Kineosphaera limosa NBRC 100340 RepID=K6WBF0_9MICO
Cardiolipin synthetase {ECO:0000313|EMBL:GAB96565.1}; TaxID=1184609 species="Bacteria; Actinobacteria; Micrococcales; Dermatophilaceae; Kineosphaera.;" source="Kineosphaera limosa NBRC 100340.;"
phosphatidylserine/phosphatidylglycerophosphate/cardiolipin synthase
scnpilot_solids1_trim150_scaffold_109_56
Pseudoxanthomonas suwonensis, Pseudoxanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(69644..70270)
DNA (627bp) protein (209aa)
Metal dependent phosphohydrolase n=1 Tax=Pseudoxanthomonas suwonensis (strain 11-1) RepID=E6WUM1_PSEUU
metal dependent phosphohydrolase
Metal dependent phosphohydrolase {ECO:0000313|EMBL:ADV27723.1}; TaxID=743721 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Pseudoxanthomonas.;" source="Pseudoxanthomonas suwonensis (strain 11-1).;"
scnpilot_solids1_trim150_scaffold_109_57
Stenotrophomonas maltophilia, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(70363..73833)
DNA (3471bp) protein (1157aa)
Transcription-repair-coupling factor {ECO:0000256|HAMAP-Rule:MF_00969}; Short=TRCF {ECO:0000256|HAMAP-Rule:MF_00969};; EC=3.6.4.- {ECO:0000256|HAMAP-Rule:MF_00969};; TaxID=868597 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas; Stenotrophomonas maltophilia group.;" source="Stenotrophomonas maltophilia JV3.;"
transcription-repair coupling factor; K03723 transcription-repair coupling factor (superfamily II helicase) [EC:3.6.4.-] rbh
Transcription-repair-coupling factor n=1 Tax=Stenotrophomonas maltophilia JV3 RepID=G0K339_STEMA rbh
scnpilot_solids1_trim150_scaffold_109_58
Stenotrophomonas rhizophila, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(74021..74566)
DNA (546bp) protein (182aa)
acyl-CoA synthetase n=1 Tax=Stenotrophomonas maltophilia RepID=UPI000309E761 rbh
Acyl-CoA synthetase {ECO:0000313|EMBL:AHY59755.1}; TaxID=216778 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas.;" source="Stenotrophomonas rhizophila.;"
N-acetyltransferase GCN5 rbh
scnpilot_solids1_trim150_scaffold_109_59
Xanthomonas sacchari, Xanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(74739..75596)
DNA (858bp) protein (286aa)
Ribosomal RNA large subunit methyltransferase J {ECO:0000256|HAMAP-Rule:MF_00934}; EC=2.1.1.266 {ECO:0000256|HAMAP-Rule:MF_00934};; 23S rRNA (adenine(2030)-N6)-methyltransferase {ECO:0000256|HAMAP-Rule:MF_00934}; 23S rRNA m6A2030 methyltransferase {ECO:0000256|HAMAP-Rule:MF_00934}; TaxID=56458 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Xanthomonas.;" source="Xanthomonas sacchari.;"
protein involved in catabolism of external DNA n=1 Tax=Xanthomonas sp. SHU308 RepID=UPI00037F2FAA rbh
hypothetical protein; K07115 rbh
scnpilot_solids1_trim150_scaffold_109_60
Xanthomonas alfalfae, Xanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

75642..76334
DNA (693bp) protein (231aa)
Two-component system regulatory protein n=3 Tax=Xanthomonas RepID=Q3BR67_XANC5 rbh
creB; DNA-binding response regulator CreB; K07663 two-component system, OmpR family, catabolic regulation response regulator CreB rbh
DNA-binding response regulator CreB {ECO:0000313|EMBL:AEO43055.1}; TaxID=981368 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Xanthomonas.;" source="Xanthomonas axonopodis pv. citrumelo F1.;"
Displaying items 31-60 of 100 in total

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