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scnpilot_solids1_trim150_scaffold_109_57

Organism: SCNPILOT_SOLID_1_TRIM150_Stenotrophomonas_70_20

near complete RP 51 / 55 MC: 4 BSCG 50 / 51 MC: 2 ASCG 12 / 38
Location: comp(70363..73833)

Top 3 Functional Annotations

Value Algorithm Source
Transcription-repair-coupling factor {ECO:0000256|HAMAP-Rule:MF_00969}; Short=TRCF {ECO:0000256|HAMAP-Rule:MF_00969};; EC=3.6.4.- {ECO:0000256|HAMAP-Rule:MF_00969};; TaxID=868597 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas; Stenotrophomonas maltophilia group.;" source="Stenotrophomonas maltophilia JV3.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 87.8
  • Coverage: 999.99
  • Bit_score: 2018
  • Evalue 0.0
transcription-repair coupling factor; K03723 transcription-repair coupling factor (superfamily II helicase) [EC:3.6.4.-] similarity KEGG
DB: KEGG
  • Identity: 87.8
  • Coverage: 999.99
  • Bit_score: 2018
  • Evalue 0.0
  • rbh
Transcription-repair-coupling factor n=1 Tax=Stenotrophomonas maltophilia JV3 RepID=G0K339_STEMA similarity UNIREF
DB: UNIREF100
  • Identity: 87.8
  • Coverage: 999.99
  • Bit_score: 2018
  • Evalue 0.0
  • rbh

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Taxonomy

Stenotrophomonas maltophilia → Stenotrophomonas → Xanthomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 3471
ATGCCGCATCACGCCTCCTACCCCGTTCCGCCGCTGCCCCGCACGGGCCAGCTCCGCGCCTGGTGGCGCGCCCCCGCATCGACCAGCGCGCTGGCCTGGTACGTGGCCCGCGCCGCGCAGGCCCATGCCGGGCCGTTGCTGCTGGTCACCCGCGACAACCACGGCGCGCACCAGGCGGTCGCCGACCTGCAGACCCTGCTGGGCGACGACGCAACGCTGCCGGTGGTGCCGTTCCCGGACTGGGAAACCCTGCCCTACGACCAGTTCAGTCCGCACCCGGACATCATTTCCCAGCGCCTGGCCGCGCTGCACCGCCTGCCCGGGCTCGCCCACGGCATCGTGGTGGTGCCGGTACAGACCCTGCTGCAACGGCTGGCGCCACTGAGTTACATCGTCGGCGGCAGCTTCGACCTGCAGGTCGGCCAGCGCCTGGACATGGACGCGGAGAAGCGCCGCCTGGAAAGCGCCGGCTACCGCAACGTGCCGCAGGTGATGGACCCGGGCGATTTCGCCGTGCGCGGTGGCCTGCTCGATGTCTACCCGATGGGCGCCGACGCGCCGCTGCGCATCGAGCTGCTGGACGAGGACATCGACTCCATCCGCGAATTCGACCCCGAATCGCAGCGCTCGCTGGACAAGGTCGCGGCGGTGAAGATGCTGCCCGGCCGCGAAGTGCCGATGGACGAGGCCAGCCTGGCGAAGGTACTGGCCACGCTGCGCGAGCGCTTCGACGTGGACACGCGCCGCAGCCCGCTCTACCAGGACCTCAAGGCCGGGGTGCTGCCCTCGGGCATCGAGTATTTCCTGCCGCTGTTCTTCGAACGCACCGCGACCCTGTTCGACTACCTGCCGGCCGGCTTCCTGAGCGTGGTCGCGCCCGGCGTGGGCGAAGCCGCCGATGCGTTCTGGGCACAGACCGGCAGCCGCTACGAACAGCGCCGCCACGACATCGAACGGCCGCTGCTGCCGCCGGAGGAGATCTACCAGACGCCGGACAGCCTGCGCGAGCAGTTCAACCGGCTGCCGCGGGTGGACGTGTGGCCGGCCGGGCACCCGCGCATCGCCGAGGCGCAGGCGCTGGGCGACCAGCCGCTGCCGCCGTTGCCGGTCGCGGCCAAGGACGCGCCGGCCGGGCAGGCGCTGAAGTCCTTCCTCGACCATTACCCCGGCCGGGTGCTGATTGCCGCCGATTCGCCGGGCCGCCGCGAGGCGCTGCTGGAAGTGCTGCAGGCCGCCGACCTGCGGCCGCCGGTGGTGCCCGGGCTGCCGGCGTTCCTGGCCGCCGACGCACCGCGCTTCGCCATCACCGTGGCGCCGCTGGACGACGGCTTCGCCCTGGCCGAGCCGCCGCTGGCGGTGCTCACCGAGCGCCAGCTGTTCCCCGAGCGCGCCGGCCAGCCGCGCCGCAGCCGCCGCGCCGGGCGCGAGCCGGAGGCGATCATCCGCGACCTCGGCGAGCTGACCGAAGGCGCGCCCATCGTCCACGAGGACCACGGCGTCGGCCGCTACCGCGGGCTGATCGCGATGGACGTCGGCGGCATGCCCGGCGAGTTCCTGGAGATCGAGTACGCCAAGGGCGACCGCCTGTACGTGCCGGTCGCGCAGCTGCACCTGATCAGCCGCTACTCCGGCGCCTCGCCGGAAACCGCGCCGCTGCACTCGCTCGGCGGCGAGCAGTGGGCCAAGGCCAAGCGCAAGGCCGCCGAGAAGGTGCGCGACGTCGCCGCCGAACTGCTGGAAATCCAGGCCCGGCGCCAGGCCCGCGCCGGGCTGGCGCTGGACATCGACCGCGCCATGTACGAACCGTTCGCCGCCGGCTTCCCGTTCGAGGAAACGCCGGACCAGCTGGCCGCGATCGAAGCCACCCTGCGCGACCTGCAGTCGTCGCAGCCGATGGACCGCGTGGTCTGCGGCGACGTCGGCTTCGGCAAGACCGAGGTGGCGGTGCGCGCCGCCTTCGCCGCCGCCAGCGGCGGCAAGCAGGTGGCGGTGCTGGTGCCCACCACGCTGCTGGCCGAGCAGCATTACCGCAACTTCCGCGACCGCTTCGCCGACTACCCGCTCAAGGTCGAAGTGCTGTCGCGCTTCAAGTCCGCCAAGGAGATCAAGGCCGAGCTGGACAAGGTGGCCGACGGCAGCATCGACGTGATCGTCGGTACCCACCGCCTGCTGCAGCCGGACGTGAAGTTCAAGGACCTGGGCCTGGTCATCGTCGACGAGGAACAGCGCTTCGGCGTGCGCCAGAAGGAAGCGCTCAAGGCCATGCGCGCCAACGTGCACCTGCTCACGCTCACCGCCACGCCGATCCCGCGCACGCTGAACATGGCCATGGCCGGGCTGCGCGACCTGTCGATCATCGCCACCCCGCCGCCTAACCGGCTGGCGGTGCAGACCTTCGTCACCCAGTGGGACAACGCGCAGCTGCGCGAGGCGTTCCAGCGCGAGCTCGCGCGCGGCGGCCAGCTGTATTTCCTGCACAACGACGTGGAAAGCATGGGCCGGATGCAGCGCGAGCTGTCCGAACTGGTGCCCGAAGCGCGCATCGGCATGGCCCATGGCCAGATGCCCGAGCGCGAGCTGGAAAAGGTGATGCTGGATTTCCAGAAGCAGCGCTTCAACGTGCTGCTGGCCAGCACCATCATCGAGTCGGGCATCGACATCCCCAACGCCAACACCATCATCATCAACCGCGCCGACCGCTTCGGCCTGGCCCAGCTGCACCAGCTGCGCGGCCGCGTCGGCCGCTCGCACCACCGCGCCTATGCGTATCTGGTGGTGCCGGACAAGCGCTCGATCACCCCCGATGCGCAGAAGCGGCTGGATGCCATCGCCTCGATGGACGAACTCGGCGCCGGCTTCACCCTGGCCACCCACGACCTGGAGATCCGTGGTGCCGGCGAACTGCTCGGCGAGGACCAGAGCGGGCAGATGGCCGAAGTCGGCTTCAGCCTCTACACCGAGCTGCTGGAGCGGGCGGTGCGCTCGATCAGGTCCGGCAAGCTGCCCGACCTGGACGCCGGCGAGGAAGTGCGCGGCGCCGAGGTCGAGCTGCACGTGCCGGCGCTGATCCCGGAGGATTACCTGCCCGACGTGCATACGCGCCTGACCCTGTACAAGCGCATTTCCAGCGCGCGCGACAGCGCCGCCCTGCGCGAACTGCAGGTGGAGATGATCGACCGCTTCGGCCTGCTGCCGGATCCGGTCAAGCACCTGTTCGCCATCGCCGAGCTCAAGCTGCAGGCCAATGCGCTGGGCATCCGCAAACTGGAACTGGGCGAGAACGGCGGCCGCATCGTGTTCGAGGCCAAGCCCGACATCGACCCGATGGCGGTGATCCAGTTGATCCAGAAGCAGCCCAGGCTCTACCAGATGGACGGCCCGGACAAGCTGCGCATCCGCCACCCGTTGCCGGAAGGCGCGGACCGCTTCAACGCCGCCCGGGCGCTGCTGGCCACCCTGCGCCCGGGGTGA
PROTEIN sequence
Length: 1157
MPHHASYPVPPLPRTGQLRAWWRAPASTSALAWYVARAAQAHAGPLLLVTRDNHGAHQAVADLQTLLGDDATLPVVPFPDWETLPYDQFSPHPDIISQRLAALHRLPGLAHGIVVVPVQTLLQRLAPLSYIVGGSFDLQVGQRLDMDAEKRRLESAGYRNVPQVMDPGDFAVRGGLLDVYPMGADAPLRIELLDEDIDSIREFDPESQRSLDKVAAVKMLPGREVPMDEASLAKVLATLRERFDVDTRRSPLYQDLKAGVLPSGIEYFLPLFFERTATLFDYLPAGFLSVVAPGVGEAADAFWAQTGSRYEQRRHDIERPLLPPEEIYQTPDSLREQFNRLPRVDVWPAGHPRIAEAQALGDQPLPPLPVAAKDAPAGQALKSFLDHYPGRVLIAADSPGRREALLEVLQAADLRPPVVPGLPAFLAADAPRFAITVAPLDDGFALAEPPLAVLTERQLFPERAGQPRRSRRAGREPEAIIRDLGELTEGAPIVHEDHGVGRYRGLIAMDVGGMPGEFLEIEYAKGDRLYVPVAQLHLISRYSGASPETAPLHSLGGEQWAKAKRKAAEKVRDVAAELLEIQARRQARAGLALDIDRAMYEPFAAGFPFEETPDQLAAIEATLRDLQSSQPMDRVVCGDVGFGKTEVAVRAAFAAASGGKQVAVLVPTTLLAEQHYRNFRDRFADYPLKVEVLSRFKSAKEIKAELDKVADGSIDVIVGTHRLLQPDVKFKDLGLVIVDEEQRFGVRQKEALKAMRANVHLLTLTATPIPRTLNMAMAGLRDLSIIATPPPNRLAVQTFVTQWDNAQLREAFQRELARGGQLYFLHNDVESMGRMQRELSELVPEARIGMAHGQMPERELEKVMLDFQKQRFNVLLASTIIESGIDIPNANTIIINRADRFGLAQLHQLRGRVGRSHHRAYAYLVVPDKRSITPDAQKRLDAIASMDELGAGFTLATHDLEIRGAGELLGEDQSGQMAEVGFSLYTELLERAVRSIRSGKLPDLDAGEEVRGAEVELHVPALIPEDYLPDVHTRLTLYKRISSARDSAALRELQVEMIDRFGLLPDPVKHLFAIAELKLQANALGIRKLELGENGGRIVFEAKPDIDPMAVIQLIQKQPRLYQMDGPDKLRIRHPLPEGADRFNAARALLATLRPG*