name | lists | location/seqs | annotations | notes |
---|---|---|---|---|
scnpilot_solids1_trim150_scaffold_174_1
Xanthomonas campestris, Xanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(93..1640)
|
hypothetical protein n=1 Tax=Xanthomonas sp. M97 RepID=UPI0003A328B5
rbh
Putative exported protein {ECO:0000313|EMBL:CEM57360.1}; TaxID=340 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Xanthomonas.;" source="Xanthomonas campestris pv. campestris.;"
hypothetical protein
rbh
|
|
scnpilot_solids1_trim150_scaffold_174_2
Stenotrophomonas sp. SKA14, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(1687..3849)
|
RelA/SpoT family protein n=1 Tax=Stenotrophomonas sp. SKA14 RepID=B8L6G2_9GAMM
rbh
RelA/SpoT family protein {ECO:0000313|EMBL:EED38864.1}; TaxID=391601 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas.;" source="Stenotrophomonas sp. SKA14.;"
|
|
scnpilot_solids1_trim150_scaffold_174_3
Stenotrophomonas sp. RIT309, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
3913..4425
|
hypothetical protein n=1 Tax=Xanthomonadaceae RepID=UPI00029B47A1
Putative secreted protein {ECO:0000313|EMBL:EZP47599.1}; TaxID=1470590 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas.;" source="Stenotrophomonas sp. RIT309.;"
hypothetical protein
|
|
scnpilot_solids1_trim150_scaffold_174_4
Stenotrophomonas maltophilia, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
4439..5050
|
Uncharacterized protein n=1 Tax=Stenotrophomonas maltophilia EPM1 RepID=M3G2I0_STEMA
Uncharacterized protein {ECO:0000313|EMBL:EJP76808.1}; TaxID=1183154 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas; Stenotrophomonas maltophilia group.;" source="Stenotrophomonas maltophilia Ab55555.;"
hypothetical protein
|
|
scnpilot_solids1_trim150_scaffold_174_5
Xanthomonas campestris, Xanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(5093..9256)
|
ATP dependent RNA helicase n=2 Tax=Xanthomonas campestris pv. campestris RepID=Q4UXI9_XANC8
rbh
Strain LMCP11 contig_2, whole genome shotgun sequence {ECO:0000313|EMBL:KIQ29838.1}; TaxID=339 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Xanthomonas.;" source="Xanthomonas campestris.;"
|
|
scnpilot_solids1_trim150_scaffold_174_6
Stenotrophomonas maltophilia, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
9345..9893
|
Ferritin Dps family protein n=2 Tax=Stenotrophomonas maltophilia RepID=B4ST10_STRM5
rbh
ferritin Dps family protein; K04047 starvation-inducible DNA-binding protein
rbh
Ferritin Dps family protein {ECO:0000313|EMBL:ACF52801.1}; TaxID=391008 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas; Stenotrophomonas maltophilia group.;" source="Stenotrophomonas maltophilia (strain R551-3).;"
|
|
scnpilot_solids1_trim150_scaffold_174_7
Stenotrophomonas maltophilia, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
10343..12148
|
ATP-dependent DNA helicase RecQ n=1 Tax=Stenotrophomonas maltophilia AU12-09 RepID=M5TIQ5_STEMA
rbh
ATP-dependent DNA helicase RecQ {ECO:0000313|EMBL:EMI49052.1}; TaxID=1235458 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas; Stenotrophomonas maltophilia group.;" source="Stenotrophomonas maltophilia AU12-09.;"
|
|
scnpilot_solids1_trim150_scaffold_174_8
Pseudoxanthomonas suwonensis, Pseudoxanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(12156..14915)
|
serine/threonine protein kinase; K08884 serine/threonine protein kinase, bacterial [EC:2.7.11.1]
Uncharacterized protein {ECO:0000313|EMBL:AKC87484.1}; TaxID=314722 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Pseudoxanthomonas.;" source="Pseudoxanthomonas suwonensis.;"
Serine/threonine protein kinase id=2862879 bin=GWF1_Xanthomonadales_69_6 species=Frateuria aurantia genus=Frateuria taxon_order=Xanthomonadales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWF1_Xanthomonadales_69_6 organism_group=Gammaproteobacteria
|
|
scnpilot_solids1_trim150_scaffold_174_9
GWF1_Xanthomonadales_69_6_curated, Gammaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(14915..15613)
|
RNA polymerase, sigma-24 subunit, ECF subfamily id=2862880 bin=GWF1_Xanthomonadales_69_6 species=Candidatus Solibacter usitatus genus=Candidatus Solibacter taxon_order=Solibacterales taxon_class=Solibacteres phylum=Acidobacteria tax=GWF1_Xanthomonadales_69_6 organism_group=Gammaproteobacteria
DNA-directed RNA polymerase specialized sigma subunit sigma24-like protein
Tax=GWF1_Xanthomonadales_69_6_curated
|
|
scnpilot_solids1_trim150_scaffold_174_trna_1
unknown
|
Not on your lists |
comp(15616..15688)
|
transferRNA Lys
|
|
scnpilot_solids1_trim150_scaffold_174_10
Xanthomonas fuscans, Xanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(15842..16507)
|
7-cyano-7-deazaguanine synthase {ECO:0000256|HAMAP-Rule:MF_01633, ECO:0000256|SAAS:SAAS00195886}; EC=6.3.4.20 {ECO:0000256|HAMAP-Rule:MF_01633, ECO:0000256|SAAS:SAAS00029421};; 7-cyano-7-carbaguanine synthase {ECO:0000256|HAMAP-Rule:MF_01633}; PreQ(0) synthase {ECO:0000256|HAMAP-Rule:MF_01633}; Queuosine biosynthesis protein QueC {ECO:0000256|HAMAP-Rule:MF_01633}; TaxID=427081 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Xanthomonas.;" source="Xanthomonas fuscan
hypothetical protein n=1 Tax=Xanthomonas arboricola RepID=UPI0002FC400F
rbh
ATPase; K06920 queuosine biosynthesis protein QueC
rbh
|
|
scnpilot_solids1_trim150_scaffold_174_11
Stenotrophomonas rhizophila, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(16587..17288)
|
7-carboxy-7-deazaguanine synthase {ECO:0000256|HAMAP-Rule:MF_00917}; Short=CDG synthase {ECO:0000256|HAMAP-Rule:MF_00917};; EC=4.3.99.3 {ECO:0000256|HAMAP-Rule:MF_00917};; Queuosine biosynthesis protein QueE {ECO:0000256|HAMAP-Rule:MF_00917}; TaxID=216778 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas.;" source="Stenotrophomonas rhizophila.;"
7-carboxy-7-deazaguanine synthase n=1 Tax=Stenotrophomonas maltophilia JV3 RepID=G0K061_STEMA
rbh
radical SAM domain-containing protein; K10026 queuosine biosynthesis protein QueE
rbh
|
|
scnpilot_solids1_trim150_scaffold_174_12
Stenotrophomonas rhizophila, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(17384..18178)
|
Kinesin light chain n=1 Tax=Xanthomonas translucens pv. translucens DSM 18974 RepID=L0SYD1_XANCT
rbh
Uncharacterized protein {ECO:0000313|EMBL:AHY58004.1}; TaxID=216778 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas.;" source="Stenotrophomonas rhizophila.;"
TPR repeat containing exported protein Putative periplasmic protein contains a protein prenylyltransferase domain
rbh
|
|
scnpilot_solids1_trim150_scaffold_174_13
Stenotrophomonas sp. SKA14, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(18182..18700)
|
Outer membrane lipoprotein omp16 n=1 Tax=Stenotrophomonas maltophilia D457 RepID=I0KRY6_STEMA
rbh
putative peptidoglycan-associated lipoprotein; K03640 peptidoglycan-associated lipoprotein
rbh
PAL family outer membrane lipoprotein {ECO:0000313|EMBL:EED39841.1}; TaxID=391601 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas.;" source="Stenotrophomonas sp. SKA14.;"
|
|
scnpilot_solids1_trim150_scaffold_174_14
Stenotrophomonas rhizophila, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(18765..20084)
|
Protein TolB n=1 Tax=Stenotrophomonas sp. SKA14 RepID=B8L6D9_9GAMM
rbh
Protein TolB {ECO:0000256|HAMAP-Rule:MF_00671}; Flags: Precursor;; TaxID=216778 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas.;" source="Stenotrophomonas rhizophila.;"
protein tolB; K03641 TolB protein
rbh
|
|
scnpilot_solids1_trim150_scaffold_174_15
Stenotrophomonas rhizophila, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(20260..21336)
|
membrane protein TolA n=1 Tax=Stenotrophomonas maltophilia RepID=UPI0002EA7DFF
rbh
Membrane protein TolA {ECO:0000313|EMBL:AHY58000.1}; TaxID=216778 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas.;" source="Stenotrophomonas rhizophila.;"
tolA; putative TolA transmembrane protein; K03646 colicin import membrane protein
rbh
|
|
scnpilot_solids1_trim150_scaffold_174_16
Stenotrophomonas rhizophila, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(21326..21754)
|
biopolymer transporter TolR n=1 Tax=Stenotrophomonas maltophilia RepID=UPI0002F6DA8E
Biopolymer transporter TolR {ECO:0000313|EMBL:AHY57999.1}; TaxID=216778 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas.;" source="Stenotrophomonas rhizophila.;"
protein TolR; K03560 biopolymer transport protein TolR
|
|
scnpilot_solids1_trim150_scaffold_174_17
Stenotrophomonas rhizophila, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(21792..22568)
|
protein tolQ n=1 Tax=Stenotrophomonas maltophilia RepID=UPI0003087E74
rbh
Colicin transporter {ECO:0000313|EMBL:AHY57998.1}; TaxID=216778 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas.;" source="Stenotrophomonas rhizophila.;"
tolQ; MotA/TolQ/ExbB proton channel family protein; K03562 biopolymer transport protein TolQ
rbh
|
|
scnpilot_solids1_trim150_scaffold_174_18
Stenotrophomonas maltophilia, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(22579..23007)
|
thioesterase; K07107 acyl-CoA thioester hydrolase [EC:3.1.2.-]
thioesterase n=1 Tax=Stenotrophomonas maltophilia RepID=UPI0003714F67
Stenotrophomonas maltophilia strain ZBG7B contig_38, whole genome shotgun sequence {ECO:0000313|EMBL:KIP86112.1}; TaxID=40324 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas; Stenotrophomonas maltophilia group.;" source="Stenotrophomonas maltophilia (Pseudomonas maltophilia) (Xanthomonas; maltophilia).;"
|
|
scnpilot_solids1_trim150_scaffold_174_19
Stenotrophomonas maltophilia, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(23000..24040)
|
ruvB; Holliday junction DNA helicase RuvB; K03551 holliday junction DNA helicase RuvB [EC:3.6.4.12]
rbh
Holliday junction ATP-dependent DNA helicase RuvB {ECO:0000256|HAMAP-Rule:MF_00016}; EC=3.6.4.12 {ECO:0000256|HAMAP-Rule:MF_00016};; TaxID=1163399 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas; Stenotrophomonas maltophilia group.;" source="Stenotrophomonas maltophilia D457.;"
Holliday junction ATP-dependent DNA helicase RuvB n=1 Tax=Stenotrophomonas maltophilia D457 RepID=I0KRZ2_STEMA
rbh
|
|
scnpilot_solids1_trim150_scaffold_174_20
Stenotrophomonas maltophilia, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(24176..26092)
|
Probable potassium transport system protein kup n=1 Tax=Stenotrophomonas maltophilia SKK35 RepID=M5CYX3_STEMA
rbh
Probable potassium transport system protein kup {ECO:0000256|HAMAP-Rule:MF_01522}; TaxID=1118156 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas; Stenotrophomonas maltophilia group.;" source="Stenotrophomonas maltophilia SKK35.;"
Low affinity potassium transport system protein kup; K03549 KUP system potassium uptake protein
rbh
|
|
scnpilot_solids1_trim150_scaffold_174_21
Stenotrophomonas rhizophila, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(26129..26764)
|
Holliday junction ATP-dependent DNA helicase RuvA {ECO:0000256|HAMAP-Rule:MF_00031, ECO:0000256|SAAS:SAAS00058935}; EC=3.6.4.12 {ECO:0000256|HAMAP-Rule:MF_00031, ECO:0000256|SAAS:SAAS00058896};; TaxID=216778 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas.;" source="Stenotrophomonas rhizophila.;"
RuvA; holliday junction resolvasome, DNA-binding subunit protein; K03550 holliday junction DNA helicase RuvA [EC:3.6.4.12]
rbh
Holliday junction DNA helicase RuvA n=1 Tax=Stenotrophomonas maltophilia RepID=UPI0002FD10D0
rbh
|
|
scnpilot_solids1_trim150_scaffold_174_22
Stenotrophomonas maltophilia, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(26790..27317)
|
Crossover junction endodeoxyribonuclease RuvC {ECO:0000256|HAMAP-Rule:MF_00034, ECO:0000256|SAAS:SAAS00106335}; EC=3.1.22.4 {ECO:0000256|HAMAP-Rule:MF_00034, ECO:0000256|SAAS:SAAS00106388};; Holliday junction nuclease RuvC {ECO:0000256|HAMAP-Rule:MF_00034}; Holliday junction resolvase RuvC {ECO:0000256|HAMAP-Rule:MF_00034}; TaxID=40324 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas; Stenotrophomonas maltophilia group.;" source="Stenotrophomonas ma
ruvC; crossover junction endodeoxyribonuclease RuvC; K01159 crossover junction endodeoxyribonuclease RuvC [EC:3.1.22.4]
Holliday junction resolvase n=1 Tax=Stenotrophomonas maltophilia RepID=UPI0002D746A6
|
|
scnpilot_solids1_trim150_scaffold_174_23
Xanthomonas sacchari, Xanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(27387..28133)
|
transcriptional regulator n=1 Tax=Xanthomonas RepID=UPI000263009D
rbh
Probable transcriptional regulatory protein SB85_00285 {ECO:0000256|HAMAP-Rule:MF_00693}; TaxID=56458 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Xanthomonas.;" source="Xanthomonas sacchari.;"
hypothetical protein
rbh
|
|
scnpilot_solids1_trim150_scaffold_174_24
Stenotrophomonas rhizophila, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(28200..28850)
|
hypothetical protein n=1 Tax=Stenotrophomonas maltophilia RepID=UPI00035FB938
rbh
Uncharacterized protein {ECO:0000313|EMBL:AHY57991.1}; TaxID=216778 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas.;" source="Stenotrophomonas rhizophila.;"
alpha/beta hydrolase fold domain-containing protein
rbh
|
|
scnpilot_solids1_trim150_scaffold_174_25
Lysobacter capsici, Lysobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(28953..32033)
|
putative TonB dependent receptor protein n=1 Tax=Xanthomonas sacchari RepID=UPI000262A7A6
rbh
Uncharacterized protein {ECO:0000313|EMBL:EYR65404.1}; TaxID=1444315 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Lysobacter.;" source="Lysobacter capsici AZ78.;"
putative TonB dependent receptor protein
rbh
|
|
scnpilot_solids1_trim150_scaffold_174_26
Sphingobium yanoikuyae, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
32191..32715
|
RNA polymerase subunit sigma-24 n=1 Tax=alpha proteobacterium LLX12A RepID=UPI000363E9A7
Sigma-70 family RNA polymerase sigma factor {ECO:0000313|EMBL:EKU76810.1}; TaxID=883163 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium yanoikuyae ATCC 51230.;"
ECF subfamily RNA polymerase sigma-24 factor
|
|
scnpilot_solids1_trim150_scaffold_174_27
R_Brevundimonas_70_19, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
32712..33719
|
hypothetical protein n=1 Tax=alpha proteobacterium L41A RepID=UPI000366BB98
FecR, iron siderophore sensor protein; K07165 transmembrane sensor
Tax=RIFCSPHIGHO2_01_FULL_Brevundimonas_70_19_curated
|
|
scnpilot_solids1_trim150_scaffold_174_28
Pseudoxanthomonas suwonensis, Pseudoxanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(33763..34287)
|
GCN5-related N-acetyltransferase n=1 Tax=Pseudoxanthomonas suwonensis (strain 11-1) RepID=E6WQJ5_PSEUU
Acetyltransferase {ECO:0000313|EMBL:AKC87332.1}; TaxID=314722 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Pseudoxanthomonas.;" source="Pseudoxanthomonas suwonensis.;"
GCN5-like N-acetyltransferase
|
|
scnpilot_solids1_trim150_scaffold_174_29
Stenotrophomonas maltophilia, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(34295..36052)
|
Aspartyl-tRNA synthetase {ECO:0000313|EMBL:CCP11365.1}; EC=6.1.1.12 {ECO:0000313|EMBL:CCP11365.1};; TaxID=1118156 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas; Stenotrophomonas maltophilia group.;" source="Stenotrophomonas maltophilia SKK35.;"
aspartyl-tRNA synthetase n=1 Tax=Xanthomonas sp. M97 RepID=UPI0003AAA154
rbh
|