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scnpilot_solids1_trim150_scaffold_344

Search features with annotation key words

Displaying items 1-30 of 85 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_solids1_trim150_scaffold_344_1
Lysobacter sp. A03, Lysobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2..142
DNA (141bp) protein (47aa)
hypothetical protein n=1 Tax=Acidovorax avenae RepID=UPI00036C6F84
putative alanine racemase; K06997
NODE_5, whole genome shotgun sequence {ECO:0000313|EMBL:KIQ98010.1}; TaxID=1199154 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Lysobacter.;" source="Lysobacter sp. A03.;"
scnpilot_solids1_trim150_scaffold_344_2
Stenotrophomonas rhizophila, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

228..1313
DNA (1086bp) protein (362aa)
membrane protein n=1 Tax=Stenotrophomonas maltophilia RepID=UPI0002F7132F rbh
Membrane protein {ECO:0000313|EMBL:AHY58610.1}; TaxID=216778 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas.;" source="Stenotrophomonas rhizophila.;"
hypothetical protein rbh
scnpilot_solids1_trim150_scaffold_344_3
Stenotrophomonas sp. RIT309, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1335..2066)
DNA (732bp) protein (244aa)
Histidine utilization repressor n=1 Tax=Stenotrophomonas maltophilia D457 RepID=I0KQ78_STEMA rbh
Histidine utilization repressor; K05836 GntR family transcriptional regulator, histidine utilization repressor rbh
HTH-type transcriptional repressor yvoA {ECO:0000313|EMBL:EZP45496.1}; TaxID=1470590 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas.;" source="Stenotrophomonas sp. RIT309.;"
scnpilot_solids1_trim150_scaffold_344_4
Xanthomonas sacchari, Xanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2086..3456)
DNA (1371bp) protein (457aa)
N-formimino-L-glutamate deiminase n=1 Tax=Xanthomonas sacchari RepID=UPI000262AB64 rbh
N-formimino-L-glutamate deiminase {ECO:0000313|EMBL:AJC44907.1}; TaxID=56458 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Xanthomonas.;" source="Xanthomonas sacchari.;"
metalo dependent hydrolase rbh
scnpilot_solids1_trim150_scaffold_344_5
Xanthomonas campestris, Xanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3518..4726
DNA (1209bp) protein (403aa)
Imidazolonepropionase {ECO:0000256|HAMAP-Rule:MF_00372, ECO:0000256|SAAS:SAAS00083112}; EC=3.5.2.7 {ECO:0000256|HAMAP-Rule:MF_00372, ECO:0000256|SAAS:SAAS00083112};; Imidazolone-5-propionate hydrolase {ECO:0000256|HAMAP-Rule:MF_00372}; TaxID=339 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Xanthomonas.;" source="Xanthomonas campestris.;"
hutI; imidazolonepropionase (EC:3.5.2.7); K01468 imidazolonepropionase [EC:3.5.2.7] rbh
imidazolonepropionase n=1 Tax=Xanthomonas arboricola RepID=UPI0002ECCB98 rbh
scnpilot_solids1_trim150_scaffold_344_6
Stenotrophomonas rhizophila, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4805..6340
DNA (1536bp) protein (512aa)
Histidine ammonia-lyase {ECO:0000256|HAMAP-Rule:MF_00229, ECO:0000256|RuleBase:RU004479}; Short=Histidase {ECO:0000256|HAMAP-Rule:MF_00229};; EC=4.3.1.3 {ECO:0000256|HAMAP-Rule:MF_00229, ECO:0000256|RuleBase:RU004479};; TaxID=216778 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas.;" source="Stenotrophomonas rhizophila.;"
histidine ammonia-lyase (EC:4.3.1.3); K01745 histidine ammonia-lyase [EC:4.3.1.3] rbh
histidine ammonia-lyase n=1 Tax=Stenotrophomonas maltophilia RepID=UPI000312F40C rbh
scnpilot_solids1_trim150_scaffold_344_7
Xanthomonas translucens, Xanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6480..7355
DNA (876bp) protein (292aa)
Formiminoglutamase {ECO:0000313|EMBL:CCP38333.1}; EC=3.5.3.8 {ECO:0000313|EMBL:CCP38333.1};; TaxID=1261556 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Xanthomonas.;" source="Xanthomonas translucens pv. translucens DSM 18974.;"
hypothetical protein; K01479 formiminoglutamase [EC:3.5.3.8] rbh
Formiminoglutamase n=1 Tax=Xanthomonas translucens pv. translucens DSM 18974 RepID=L0SU41_XANCT rbh
scnpilot_solids1_trim150_scaffold_344_8
Pseudoxanthomonas suwonensis, Pseudoxanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7352..9019
DNA (1668bp) protein (556aa)
Urocanate hydratase {ECO:0000256|HAMAP-Rule:MF_00577, ECO:0000256|SAAS:SAAS00011632}; Short=Urocanase {ECO:0000256|HAMAP-Rule:MF_00577};; EC=4.2.1.49 {ECO:0000256|HAMAP-Rule:MF_00577, ECO:0000256|SAAS:SAAS00011632};; Imidazolonepropionate hydrolase {ECO:0000256|HAMAP-Rule:MF_00577}; TaxID=314722 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Pseudoxanthomonas.;" source="Pseudoxanthomonas suwonensis.;"
urocanate hydratase (EC:4.2.1.49); K01712 urocanate hydratase [EC:4.2.1.49]
urocanate hydratase n=1 Tax=Dyella japonica RepID=UPI0002E14830
scnpilot_solids1_trim150_scaffold_344_9
BJP_IG2103_SUB10_Xanthomonadales_61_45, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9237..10763
DNA (1527bp) protein (509aa)
Beta-lactamase n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4VWF9_9GAMM
beta-lactamase rbh
Tax=BJP_IG2103_SUB10_Xanthomonadales_61_45
scnpilot_solids1_trim150_scaffold_344_10
BJP_IG2103_SUB10_Xanthomonadales_61_45, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10834..11196
DNA (363bp) protein (121aa)
hypothetical protein n=1 Tax=Rudaea cellulosilytica RepID=UPI00036E734D
hypothetical protein
Tax=BJP_IG2103_SUB10_Xanthomonadales_61_45
scnpilot_solids1_trim150_scaffold_344_11
BJP_IG2103_SUB10_Xanthomonadales_61_45, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11189..11758
DNA (570bp) protein (190aa)
hypothetical protein n=1 Tax=Rudaea cellulosilytica RepID=UPI00035FCFC8
sigma-70 family RNA polymerase sigma factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily
Tax=BJP_IG2103_SUB10_Xanthomonadales_61_45
scnpilot_solids1_trim150_scaffold_344_12
BJP_08E140C01_10KDA_Sphingopyxis_64_55, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11755..12075
DNA (321bp) protein (107aa)
hypothetical protein n=1 Tax=Rudaea cellulosilytica RepID=UPI00037B8D0E
Tax=BJP_08E140C01_10KDA_Sphingopyxis_64_55
scnpilot_solids1_trim150_scaffold_344_13
Pseudomonas entomophila, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12218..12724
DNA (507bp) protein (169aa)
acetyltransferase; K03824 putative acetyltransferase [EC:2.3.1.-]
Putative acetyltransferase, GNAT family n=1 Tax=Pseudomonas entomophila (strain L48) RepID=Q1I8I2_PSEE4
Putative acetyltransferase, GNAT family {ECO:0000313|EMBL:CAK16046.1}; TaxID=384676 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas entomophila (strain L48).;"
scnpilot_solids1_trim150_scaffold_344_14
Lysobacter daejeonensis, Lysobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12843..13574)
DNA (732bp) protein (244aa)
hypothetical protein n=1 Tax=Stenotrophomonas maltophilia RepID=UPI000377DC45 rbh
Uncharacterized protein {ECO:0000313|EMBL:KGM55748.1}; TaxID=1385517 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Lysobacter.;" source="Lysobacter daejeonensis GH1-9.;"
hypothetical protein rbh
scnpilot_solids1_trim150_scaffold_344_15
Stenotrophomonas rhizophila, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13687..13950)
DNA (264bp) protein (88aa)
membrane protein n=1 Tax=Stenotrophomonas maltophilia RepID=UPI000311B3F8
hypothetical protein; K06078 murein lipoprotein
Membrane protein {ECO:0000313|EMBL:AHY57460.1}; TaxID=216778 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas.;" source="Stenotrophomonas rhizophila.;"
scnpilot_solids1_trim150_scaffold_344_16
Stenotrophomonas sp. SKA14, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14516..15589)
DNA (1074bp) protein (358aa)
beta-lactamase; K01286 D-alanyl-D-alanine carboxypeptidase [EC:3.4.16.4] rbh
Beta-lactamase n=1 Tax=Stenotrophomonas sp. SKA14 RepID=B8LAE2_9GAMM rbh
Beta-lactamase {ECO:0000313|EMBL:EED37789.1}; TaxID=391601 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas.;" source="Stenotrophomonas sp. SKA14.;"
scnpilot_solids1_trim150_scaffold_344_17
Stenotrophomonas rhizophila, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16129..18624)
DNA (2496bp) protein (832aa)
peptidase n=1 Tax=Stenotrophomonas maltophilia RepID=UPI0002EC8390 rbh
Peptidase {ECO:0000313|EMBL:AHY58587.1}; TaxID=216778 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas.;" source="Stenotrophomonas rhizophila.;"
peptidase S9 prolyl oligopeptidase active site domain-containing protein rbh
scnpilot_solids1_trim150_scaffold_344_18
Xanthomonas arboricola, Xanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18850..19860
DNA (1011bp) protein (337aa)
Putative signal transduction protein n=1 Tax=Xanthomonas campestris pv. campestris (strain B100) RepID=B0RVZ7_XANCB
GGDEF domain-containing protein {ECO:0000313|EMBL:GAE52017.1}; TaxID=1414836 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Xanthomonas.;" source="Xanthomonas arboricola pv. pruni str. MAFF 311562.;"
putative signal protein with GGDEF domain
scnpilot_solids1_trim150_scaffold_344_19
Stenotrophomonas sp. RIT309, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19932..20630)
DNA (699bp) protein (233aa)
Uncharacterized protein n=3 Tax=Stenotrophomonas maltophilia RepID=J7UM31_STEMA rbh
Ompa5 protein {ECO:0000313|EMBL:EZP43223.1}; TaxID=1470590 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas.;" source="Stenotrophomonas sp. RIT309.;"
putative outer membrane lipoprotein rbh
scnpilot_solids1_trim150_scaffold_344_20
Pseudoxanthomonas suwonensis, Pseudoxanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20917..21360)
DNA (444bp) protein (148aa)
Uncharacterized protein n=1 Tax=Xanthomonas axonopodis pv. punicae str. LMG 859 RepID=H1XI82_9XANT
Uncharacterized protein {ECO:0000313|EMBL:AKC87866.1}; TaxID=314722 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Pseudoxanthomonas.;" source="Pseudoxanthomonas suwonensis.;"
hypothetical protein
scnpilot_solids1_trim150_scaffold_344_21
Stenotrophomonas maltophilia, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21465..23147
DNA (1683bp) protein (561aa)
Long-chain fatty acid--CoA ligase {ECO:0000313|EMBL:EQM87489.1}; EC=6.2.1.3 {ECO:0000313|EMBL:EQM87489.1};; TaxID=1333853 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas; Stenotrophomonas maltophilia group.;" source="Stenotrophomonas maltophilia MF89.;"
fadD; putative long-chain fatty acyl CoA ligase; K01897 long-chain acyl-CoA synthetase [EC:6.2.1.3] rbh
Long-chain fatty acid--CoA ligase n=1 Tax=Stenotrophomonas maltophilia MF89 RepID=T5L5D7_STEMA rbh
scnpilot_solids1_trim150_scaffold_344_22
Xanthomonas campestris, Xanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23304..24191
DNA (888bp) protein (296aa)
Enoyl-CoA hydratase n=1 Tax=Xanthomonas hortorum pv. carotae str. M081 RepID=V7ZCN2_9XANT rbh
Strain LMCP11 contig_30, whole genome shotgun sequence {ECO:0000313|EMBL:KIQ23833.1}; TaxID=339 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Xanthomonas.;" source="Xanthomonas campestris.;"
rpfF; RpfF protein; K13816 DSF synthase rbh
scnpilot_solids1_trim150_scaffold_344_23
Stenotrophomonas maltophilia, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24216..26393)
DNA (2178bp) protein (726aa)
rpfC; Sensory/regulatory protein rpfC (EC:2.7.3.-) rbh
ATPase n=1 Tax=Stenotrophomonas maltophilia RepID=UPI0002D653D0 rbh
ATPase {ECO:0000313|EMBL:KDE89731.1}; TaxID=1451188 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas; Stenotrophomonas maltophilia group.;" source="Stenotrophomonas maltophilia M30.;"
scnpilot_solids1_trim150_scaffold_344_24
Stenotrophomonas maltophilia, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(26395..27456)
DNA (1062bp) protein (354aa)
Response regulator receiver modulated metal dependent phosphohydrolase n=1 Tax=Stenotrophomonas maltophilia JV3 RepID=G0JYT7_STEMA rbh
response regulator receiver modulated metal dependent phosphohydrolase rbh
Response regulator receiver modulated metal dependent phosphohydrolase {ECO:0000313|EMBL:AEM51210.1}; TaxID=868597 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas; Stenotrophomonas maltophilia group.;" source="Stenotrophomonas maltophilia JV3.;"
scnpilot_solids1_trim150_scaffold_344_25
Stenotrophomonas rhizophila, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(27650..29167)
DNA (1518bp) protein (506aa)
Lysine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00252, ECO:0000256|RuleBase:RU000336}; EC=6.1.1.6 {ECO:0000256|HAMAP-Rule:MF_00252, ECO:0000256|RuleBase:RU000336};; Lysyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00252}; TaxID=216778 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas.;" source="Stenotrophomonas rhizophila.;"
lysS; lysyl-tRNA synthetase (EC:6.1.1.6); K04567 lysyl-tRNA synthetase, class II [EC:6.1.1.6] rbh
lysyl-tRNA synthetase n=1 Tax=Stenotrophomonas maltophilia RepID=UPI0002F5CEA5 rbh
scnpilot_solids1_trim150_scaffold_344_26
Xanthomonas perforans, Xanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(29268..30194)
DNA (927bp) protein (309aa)
Peptide chain release factor 2 n=2 Tax=Xanthomonas RepID=G2LR89_9XANT
prfB; peptide chain release factor 2; K02836 peptide chain release factor 2
Peptide chain release factor 2 {ECO:0000256|SAAS:SAAS00090452}; TaxID=925776 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Xanthomonas.;" source="Xanthomonas perforans 91-118.;"
scnpilot_solids1_trim150_scaffold_344_27
Stenotrophomonas sp. RIT309, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

30457..31701
DNA (1245bp) protein (415aa)
Uncharacterized protein n=1 Tax=Stenotrophomonas maltophilia D457 RepID=I0KS74_STEMA
Uncharacterized protein {ECO:0000313|EMBL:EZP47103.1}; TaxID=1470590 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas.;" source="Stenotrophomonas sp. RIT309.;"
hypothetical protein
scnpilot_solids1_trim150_scaffold_344_28
Arenimonas composti, Arenimonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

31828..33171
DNA (1344bp) protein (448aa)
ABC transporter substrate-binding protein n=1 Tax=Pseudomonas geniculata RepID=UPI00029A9A92
Uncharacterized protein {ECO:0000313|EMBL:KFN51494.1}; TaxID=1121013 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Arenimonas.;" source="Arenimonas composti TR7-09 = DSM 18010.;"
hypothetical protein
scnpilot_solids1_trim150_scaffold_344_29
RIFOXYA1_FULL_Xanthomonadales_68_6_curated, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(33267..34145)
DNA (879bp) protein (293aa)
LytTR family transcriptional regulator n=1 Tax=Pseudoxanthomonas sp. GW2 RepID=UPI00031C47E4 rbh
response regulator receiver protein rbh
Tax=RIFOXYA1_FULL_Xanthomonadales_68_6_curated
scnpilot_solids1_trim150_scaffold_344_30
Pseudoxanthomonas suwonensis, Pseudoxanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

34297..35487
DNA (1191bp) protein (397aa)
Acetyltransferase n=1 Tax=Pseudoxanthomonas suwonensis (strain 11-1) RepID=E6WTV4_PSEUU
acetyltransferase
Acetyltransferase {ECO:0000313|EMBL:ADV27603.1}; TaxID=743721 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Pseudoxanthomonas.;" source="Pseudoxanthomonas suwonensis (strain 11-1).;"
Displaying items 1-30 of 85 in total

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