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scnpilot_solids1_trim150_scaffold_457

Search features with annotation key words

Displaying items 1-30 of 31 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_solids1_trim150_scaffold_457_1
GWF1_Xanthomonadales_69_6_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3..167)
DNA (165bp) protein (55aa)
beta-ketoacyl synthase; K00647 3-oxoacyl-[acyl-carrier-protein] synthase I [EC:2.3.1.41]
beta-ketoacyl-[ACP] synthase I id=3012819 bin=GWF1_Xanthomonadales_69_6 species=unknown genus=Xanthomonas taxon_order=Xanthomonadales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWF1_Xanthomonadales_69_6 organism_group=Gammaproteobacteria
Tax=GWF1_Xanthomonadales_69_6_curated
scnpilot_solids1_trim150_scaffold_457_2
Stenotrophomonas rhizophila, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(130..1056)
DNA (927bp) protein (309aa)
Methylglyoxal synthase (EC:4.2.3.3) rbh
methylglyoxal synthase n=1 Tax=Stenotrophomonas maltophilia RepID=UPI00036C746D rbh
Methylglyoxal synthase {ECO:0000313|EMBL:AHY60889.1}; TaxID=216778 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas.;" source="Stenotrophomonas rhizophila.;"
scnpilot_solids1_trim150_scaffold_457_3
Stenotrophomonas maltophilia, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1214..2659)
DNA (1446bp) protein (482aa)
gltD; glutamate synthase subunit beta (EC:1.4.1.13); K00266 glutamate synthase (NADPH/NADH) small chain [EC:1.4.1.13 1.4.1.14] rbh
Putative glutamate synthase [nadph] small chain {ECO:0000313|EMBL:CAQ43718.1}; EC=1.4.1.13 {ECO:0000313|EMBL:CAQ43718.1};; TaxID=522373 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas; Stenotrophomonas maltophilia group.;" source="Stenotrophomonas maltophilia (strain K279a).;"
Putative glutamate synthase [nadph] small chain n=1 Tax=Stenotrophomonas maltophilia (strain K279a) RepID=B2FU66_STRMK rbh
scnpilot_solids1_trim150_scaffold_457_4
Stenotrophomonas rhizophila, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2757..7211)
DNA (4455bp) protein (1485aa)
Glutamate synthase {ECO:0000313|EMBL:AHY60886.1}; EC=1.4.1.13 {ECO:0000313|EMBL:AHY60886.1};; TaxID=216778 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas.;" source="Stenotrophomonas rhizophila.;"
glutamate synthase (EC:1.4.7.1); K00265 glutamate synthase (NADPH/NADH) large chain [EC:1.4.1.13 1.4.1.14] rbh
glutamate synthase subunit alpha n=1 Tax=Stenotrophomonas maltophilia RepID=UPI00035DEEF1 rbh
scnpilot_solids1_trim150_scaffold_457_5
Stenotrophomonas maltophilia, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7437..7835)
DNA (399bp) protein (133aa)
Uncharacterized protein n=2 Tax=Stenotrophomonas maltophilia RepID=J7VWX9_STEMA
Stenotrophomonas maltophilia strain JMNMN1 ContigID01, whole genome shotgun sequence {ECO:0000313|EMBL:KKD57807.1}; TaxID=40324 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas; Stenotrophomonas maltophilia group.;" source="Stenotrophomonas maltophilia (Pseudomonas maltophilia) (Xanthomonas; maltophilia).;"
hypothetical protein
scnpilot_solids1_trim150_scaffold_457_6
Stenotrophomonas sp. RIT309, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7936..8256)
DNA (321bp) protein (107aa)
hypothetical protein n=1 Tax=Stenotrophomonas maltophilia RepID=UPI000311F119
Uncharacterized protein {ECO:0000313|EMBL:EZP42593.1}; TaxID=1470590 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas.;" source="Stenotrophomonas sp. RIT309.;"
hypothetical protein
scnpilot_solids1_trim150_scaffold_457_7
Xanthomonas campestris, Xanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8386..9501
DNA (1116bp) protein (372aa)
Saccharopine dehydrogenase n=1 Tax=Xanthomonas campestris pv. raphani 756C RepID=G0CHH7_XANCA rbh
saccharopine dehydrogenase rbh
Saccharopine dehydrogenase {ECO:0000313|EMBL:AEL04991.1}; TaxID=990315 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Xanthomonas.;" source="Xanthomonas campestris pv. raphani 756C.;"
scnpilot_solids1_trim150_scaffold_457_8
Xanthomonas sacchari, Xanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9617..10003
DNA (387bp) protein (129aa)
methicillin resistance protein n=1 Tax=Xanthomonas RepID=UPI0002E440B3
Methicillin resistance protein {ECO:0000313|EMBL:AJC46613.1}; TaxID=56458 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Xanthomonas.;" source="Xanthomonas sacchari.;"
mecI; methicillin resistance protein; K02546 methicillin resistance regulatory protein
scnpilot_solids1_trim150_scaffold_457_9
Xanthomonas translucens, Xanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10006..11844
DNA (1839bp) protein (613aa)
Membrane anchored peptidase n=1 Tax=Xanthomonas translucens DAR61454 RepID=L7GPQ4_XANCT rbh
Membrane anchored peptidase {ECO:0000313|EMBL:ELQ07648.1}; TaxID=1205753 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Xanthomonas.;" source="Xanthomonas translucens DAR61454.;"
BlaR1 peptidase M56 family protein rbh
scnpilot_solids1_trim150_scaffold_457_10
Stenotrophomonas rhizophila, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11918..13042)
DNA (1125bp) protein (375aa)
exonuclease n=1 Tax=Xanthomonas arboricola RepID=UPI0002D8394F rbh
Exonuclease {ECO:0000313|EMBL:AHY60876.1}; TaxID=216778 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas.;" source="Stenotrophomonas rhizophila.;"
hypothetical protein; K07502 hypothetical protein rbh
scnpilot_solids1_trim150_scaffold_457_11
Xanthomonas campestris, Xanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13039..15531)
DNA (2493bp) protein (831aa)
Putative ATP-dependent helicase {ECO:0000313|EMBL:CEM56286.1}; EC=3.6.1.- {ECO:0000313|EMBL:CEM56286.1};; TaxID=340 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Xanthomonas.;" source="Xanthomonas campestris pv. campestris.;"
YprA n=1 Tax=Xanthomonas campestris pv. raphani 756C RepID=G0CHI0_XANCA rbh
hypothetical protein; K06877 DEAD/DEAH box helicase domain-containing protein rbh
scnpilot_solids1_trim150_scaffold_457_12
Stenotrophomonas sp. RIT309, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15709..16176
DNA (468bp) protein (156aa)
Uncharacterized protein n=1 Tax=Stenotrophomonas maltophilia JV3 RepID=G0K2Y8_STEMA
Uncharacterized protein {ECO:0000313|EMBL:EZP42584.1}; TaxID=1470590 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas.;" source="Stenotrophomonas sp. RIT309.;"
hypothetical protein
scnpilot_solids1_trim150_scaffold_457_13
Stenotrophomonas maltophilia, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16237..17262
DNA (1026bp) protein (342aa)
membrane protein n=1 Tax=Stenotrophomonas maltophilia RepID=UPI00036AD1AD rbh
Membrane protein {ECO:0000313|EMBL:EQM81930.1}; TaxID=1333853 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas; Stenotrophomonas maltophilia group.;" source="Stenotrophomonas maltophilia MF89.;"
putative transmembrane protein rbh
scnpilot_solids1_trim150_scaffold_457_14
Stenotrophomonas sp. SKA14, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17279..18484)
DNA (1206bp) protein (402aa)
hypothetical protein n=1 Tax=Stenotrophomonas maltophilia RepID=UPI0003146D17 rbh
Putative uncharacterized protein {ECO:0000313|EMBL:EED38059.1}; TaxID=391601 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas.;" source="Stenotrophomonas sp. SKA14.;"
hypothetical protein rbh
scnpilot_solids1_trim150_scaffold_457_15
Stenotrophomonas maltophilia, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18540..18992)
DNA (453bp) protein (151aa)
Uncharacterized protein n=1 Tax=Stenotrophomonas maltophilia AU12-09 RepID=M5TS46_STEMA
Uncharacterized protein {ECO:0000313|EMBL:EMI48426.1}; TaxID=1235458 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas; Stenotrophomonas maltophilia group.;" source="Stenotrophomonas maltophilia AU12-09.;"
hypothetical protein
scnpilot_solids1_trim150_scaffold_457_16
Xanthomonas oryzae, Xanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19045..19815
DNA (771bp) protein (257aa)
tmk; thymidylate kinase (EC:2.7.4.9); K00943 dTMP kinase [EC:2.7.4.9] rbh
Thymidylate kinase {ECO:0000255|HAMAP-Rule:MF_00165}; EC=2.7.4.9 {ECO:0000255|HAMAP-Rule:MF_00165};; dTMP kinase {ECO:0000255|HAMAP-Rule:MF_00165}; TaxID=342109 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Xanthomonas.;" source="Xanthomonas oryzae pv. oryzae (strain MAFF 311018).;"
Thymidylate kinase n=3 Tax=Xanthomonas oryzae pv. oryzae RepID=KTHY_XANOM rbh
scnpilot_solids1_trim150_scaffold_457_17
Lysobacter concretionis, Lysobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19831..20808
DNA (978bp) protein (326aa)
Ribosomal RNA large subunit methyltransferase F {ECO:0000256|HAMAP-Rule:MF_01848, ECO:0000256|SAAS:SAAS00036602}; EC=2.1.1.181 {ECO:0000256|HAMAP-Rule:MF_01848, ECO:0000256|SAAS:SAAS00036596};; 23S rRNA mA1618 methyltransferase {ECO:0000256|HAMAP-Rule:MF_01848}; rRNA adenine N-6-methyltransferase {ECO:0000256|HAMAP-Rule:MF_01848}; TaxID=1122185 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Lysobacter.;" source="Lysobacter concretionis Ko07 = DSM 16239.;"
rlmF; ribosomal RNA large subunit methyltransferase F (EC:2.1.1.181) rbh
Ribosomal RNA large subunit methyltransferase F n=1 Tax=Pseudomonas alcaligenes NBRC 14159 RepID=U2ZT35_PSEAC rbh
scnpilot_solids1_trim150_scaffold_457_18
Xanthomonas campestris, Xanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20880..21626
DNA (747bp) protein (249aa)
Uncharacterized protein n=2 Tax=Xanthomonas campestris RepID=B0RLP1_XANCB
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AAM39391.1}; TaxID=190485 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Xanthomonas.;" source="Xanthomonas campestris pv. campestris (strain ATCC 33913 / DSM 3586 /; NCPPB 528 / LMG 568 / P 25).;"
scnpilot_solids1_trim150_scaffold_457_19
Acinetobacter gyllenbergii, Acinetobacter, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21859..23025
DNA (1167bp) protein (389aa)
OOP family OmpA-OmpF porin n=2 Tax=Acinetobacter gyllenbergii RepID=S3NTC3_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:ESK47522.1}; TaxID=1217658 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Moraxellaceae; Acinetobacter.;" source="Acinetobacter gyllenbergii NIPH 230.;"
OmpA family outer membrane lipoprotein; K03286 OmpA-OmpF porin, OOP family
scnpilot_solids1_trim150_scaffold_457_20
Lysobacter dokdonensis, Lysobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23117..25036
DNA (1920bp) protein (640aa)
Peptidase M61 domain protein n=1 Tax=Tsukamurella paurometabola (strain ATCC 8368 / DSM 20162 / JCM 10117 / NBRC 16120 / NCTC 13040) RepID=D5UNS3_TSUPD rbh
Peptidase M61 {ECO:0000313|EMBL:KGQ20201.1}; TaxID=1300345 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Lysobacter.;" source="Lysobacter dokdonensis DS-58.;"
peptidase M61 domain-containing protein rbh
scnpilot_solids1_trim150_scaffold_457_21
Stenotrophomonas maltophilia, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(25151..26896)
DNA (1746bp) protein (582aa)
membrane protein n=1 Tax=Stenotrophomonas maltophilia RepID=UPI0003019359 rbh
Stenotrophomonas maltophilia strain ZBG7B contig_6, whole genome shotgun sequence {ECO:0000313|EMBL:KIP87600.1}; TaxID=40324 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas; Stenotrophomonas maltophilia group.;" source="Stenotrophomonas maltophilia (Pseudomonas maltophilia) (Xanthomonas; maltophilia).;"
putative transmembrane protein rbh
scnpilot_solids1_trim150_scaffold_457_22
Stenotrophomonas maltophilia, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(26893..29019)
DNA (2127bp) protein (709aa)
membrane protein n=1 Tax=Stenotrophomonas maltophilia RepID=UPI00031B64FF rbh
putative transmembrane protein rbh
Putative transmembrane protein {ECO:0000313|EMBL:CAQ43734.1}; TaxID=522373 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas; Stenotrophomonas maltophilia group.;" source="Stenotrophomonas maltophilia (strain K279a).;"
scnpilot_solids1_trim150_scaffold_457_23
Pseudoxanthomonas spadix, Pseudoxanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(29016..30167)
DNA (1152bp) protein (384aa)
Putative uncharacterized protein n=1 Tax=Pseudoxanthomonas spadix (strain BD-a59) RepID=G7UQY8_PSEUP rbh
hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:AER57060.1}; TaxID=1045855 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Pseudoxanthomonas.;" source="Pseudoxanthomonas spadix (strain BD-a59).;"
scnpilot_solids1_trim150_scaffold_457_24
Stenotrophomonas maltophilia, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(30164..31066)
DNA (903bp) protein (301aa)
von Willebrand factor A n=1 Tax=Stenotrophomonas maltophilia RepID=UPI0002DA3BDF rbh
Stenotrophomonas maltophilia strain ZBG7B contig_6, whole genome shotgun sequence {ECO:0000313|EMBL:KIP87601.1}; TaxID=40324 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas; Stenotrophomonas maltophilia group.;" source="Stenotrophomonas maltophilia (Pseudomonas maltophilia) (Xanthomonas; maltophilia).;"
hypothetical protein rbh
scnpilot_solids1_trim150_scaffold_457_25
Stenotrophomonas maltophilia, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(31085..32074)
DNA (990bp) protein (330aa)
putative ATPase; K03924 MoxR-like ATPase [EC:3.6.3.-] rbh
Uncharacterized protein n=1 Tax=Stenotrophomonas maltophilia Ab55555 RepID=J7VE12_STEMA rbh
Uncharacterized protein {ECO:0000313|EMBL:EJP80856.1}; TaxID=1183154 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas; Stenotrophomonas maltophilia group.;" source="Stenotrophomonas maltophilia Ab55555.;"
scnpilot_solids1_trim150_scaffold_457_26
Lysobacter dokdonensis, Lysobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(32091..32807)
DNA (717bp) protein (239aa)
hypothetical protein n=1 Tax=Stenotrophomonas maltophilia RepID=UPI0002F7F7F5 rbh
DUF4159 domain containing protein {ECO:0000313|EMBL:KGQ19352.1}; TaxID=1300345 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Lysobacter.;" source="Lysobacter dokdonensis DS-58.;"
hypothetical protein rbh
scnpilot_solids1_trim150_scaffold_457_27
Stenotrophomonas sp. RIT309, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(32937..34271)
DNA (1335bp) protein (445aa)
TldD protein n=1 Tax=Stenotrophomonas maltophilia RepID=UPI0002E66B2B rbh
TldE/PmbA family protein, Actinobacterial subgroup {ECO:0000313|EMBL:EZP42576.1}; TaxID=1470590 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas.;" source="Stenotrophomonas sp. RIT309.;"
peptidase U62 modulator of DNA gyrase rbh
scnpilot_solids1_trim150_scaffold_457_28
Stenotrophomonas maltophilia, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(34268..35875)
DNA (1608bp) protein (536aa)
Peptidase U62 modulator of DNA gyrase n=1 Tax=Stenotrophomonas maltophilia JV3 RepID=G0K2Z7_STEMA
peptidase U62 modulator of DNA gyrase; K03568 TldD protein
Peptidase U62 modulator of DNA gyrase {ECO:0000313|EMBL:AEM49422.1}; Flags: Precursor;; TaxID=868597 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas; Stenotrophomonas maltophilia group.;" source="Stenotrophomonas maltophilia JV3.;"
scnpilot_solids1_trim150_scaffold_457_29
Lysobacter concretionis, Lysobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(36070..37698)
DNA (1629bp) protein (543aa)
TldD protein n=1 Tax=Stenotrophomonas maltophilia RepID=UPI0003741FF7 rbh
TldD protein {ECO:0000313|EMBL:KGM51363.1}; TaxID=1122185 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Lysobacter.;" source="Lysobacter concretionis Ko07 = DSM 16239.;"
peptidase U62 modulator of DNA gyrase; K03568 TldD protein rbh
scnpilot_solids1_trim150_scaffold_457_30
Lysobacter capsici, Lysobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

37838..38494
DNA (657bp) protein (219aa)
Putative uncharacterized protein n=1 Tax=Xanthomonas gardneri ATCC 19865 RepID=F0CBF8_9XANT
Uncharacterized protein {ECO:0000313|EMBL:EYR68884.1}; TaxID=1444315 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Lysobacter.;" source="Lysobacter capsici AZ78.;"
hypothetical protein
Displaying items 1-30 of 31 in total

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