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scnpilot_solids1_trim150_scaffold_636

Search features with annotation key words

Displaying items 1-30 of 41 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_solids1_trim150_scaffold_636_1
Stenotrophomonas maltophilia, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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3..3104
DNA (3102bp) protein (1034aa)
Signal transduction histidine kinase; K07677 two-component system, NarL family, capsular synthesis sensor histidine kinase RcsC [EC:2.7.13.3] rbh
Signal transduction histidine kinase n=1 Tax=Stenotrophomonas maltophilia D457 RepID=I0KJV6_STEMA rbh
Histidine kinase {ECO:0000313|EMBL:KDE91465.1}; TaxID=1451188 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas; Stenotrophomonas maltophilia group.;" source="Stenotrophomonas maltophilia M30.;"
scnpilot_solids1_trim150_scaffold_636_2
Stenotrophomonas maltophilia, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3101..3742
DNA (642bp) protein (214aa)
Uncharacterized protein n=2 Tax=Stenotrophomonas maltophilia RepID=J7UPK1_STEMA rbh
putative two-component response regulator transcriptional regulator; K07687 two-component system, NarL family, captular synthesis response regulator RcsB rbh
Uncharacterized protein {ECO:0000313|EMBL:EJP77840.1}; TaxID=1183154 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas; Stenotrophomonas maltophilia group.;" source="Stenotrophomonas maltophilia Ab55555.;"
scnpilot_solids1_trim150_scaffold_636_3
Stenotrophomonas maltophilia, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4001..7636
DNA (3636bp) protein (1212aa)
Uncharacterized protein n=1 Tax=Stenotrophomonas maltophilia D457 RepID=I0KJV4_STEMA rbh
Uncharacterized protein {ECO:0000313|EMBL:CCH11343.1}; TaxID=1163399 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas; Stenotrophomonas maltophilia group.;" source="Stenotrophomonas maltophilia D457.;"
hypothetical protein rbh
scnpilot_solids1_trim150_scaffold_636_4
unknown

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8152..8370
DNA (219bp) protein (73aa)

This feature has no annotations

scnpilot_solids1_trim150_scaffold_636_trna_1
unknown

Not on your lists

comp(9004..9076)
DNA (73bp)
transferRNA Thr
scnpilot_solids1_trim150_scaffold_636_5
Stenotrophomonas rhizophila, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(9119..9883)
DNA (765bp) protein (255aa)
sporulation protein n=1 Tax=Stenotrophomonas maltophilia RepID=UPI0002D5EF77
Sporulation protein {ECO:0000313|EMBL:AHY60685.1}; TaxID=216778 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas.;" source="Stenotrophomonas rhizophila.;"
hypothetical protein
scnpilot_solids1_trim150_scaffold_636_6
Stenotrophomonas maltophilia, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9893..10630)
DNA (738bp) protein (246aa)
Type III pantothenate kinase {ECO:0000256|HAMAP-Rule:MF_01274}; EC=2.7.1.33 {ECO:0000256|HAMAP-Rule:MF_01274};; PanK-III {ECO:0000256|HAMAP-Rule:MF_01274}; Pantothenic acid kinase {ECO:0000256|HAMAP-Rule:MF_01274}; TaxID=1333853 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas; Stenotrophomonas maltophilia group.;" source="Stenotrophomonas maltophilia MF89.;"
pantothenate kinase; K03525 type III pantothenate kinase [EC:2.7.1.33] rbh
Type III pantothenate kinase n=1 Tax=Stenotrophomonas maltophilia MF89 RepID=T5KJY9_STEMA rbh
scnpilot_solids1_trim150_scaffold_636_7
Xanthomonas translucens, Xanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10627..11577)
DNA (951bp) protein (317aa)
birA; biotin--[acetyl-CoA-carboxylase] ligase (EC:6.3.4.15); K03524 BirA family transcriptional regulator, biotin operon repressor / biotin-[acetyl-CoA-carboxylase] ligase [EC:6.3.4.15] rbh
biotin-protein ligase n=1 Tax=Stenotrophomonas maltophilia RepID=UPI00037D43FA rbh
Bifunctional ligase/repressor BirA {ECO:0000256|HAMAP-Rule:MF_00978}; Biotin operon repressor {ECO:0000256|HAMAP-Rule:MF_00978}; Biotin--[acetyl-CoA-carboxylase] ligase {ECO:0000256|HAMAP-Rule:MF_00978}; Biotin--protein ligase {ECO:0000256|HAMAP-Rule:MF_00978}; Biotin-[acetyl-CoA carboxylase] synthetase {ECO:0000256|HAMAP-Rule:MF_00978}; TaxID=1205753 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Xanthomonas.;" source="Xanthomonas translucens DAR61454.;"
scnpilot_solids1_trim150_scaffold_636_8
Stenotrophomonas rhizophila, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11721..12008
DNA (288bp) protein (96aa)
hypothetical protein n=1 Tax=Stenotrophomonas maltophilia RepID=UPI0003635B68
Uncharacterized protein {ECO:0000313|EMBL:AHY60688.1}; TaxID=216778 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas.;" source="Stenotrophomonas rhizophila.;"
hypothetical protein
scnpilot_solids1_trim150_scaffold_636_9
Pseudoxanthomonas suwonensis, Pseudoxanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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11975..12778
DNA (804bp) protein (268aa)
Putative uncharacterized protein n=1 Tax=Pseudoxanthomonas suwonensis (strain 11-1) RepID=E6WVU5_PSEUU rbh
hypothetical protein; K09933 hypothetical protein rbh
Putative uncharacterized protein {ECO:0000313|EMBL:ADV28368.1}; TaxID=743721 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Pseudoxanthomonas.;" source="Pseudoxanthomonas suwonensis (strain 11-1).;"
scnpilot_solids1_trim150_scaffold_636_10
Stenotrophomonas maltophilia, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12867..14294)
DNA (1428bp) protein (476aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=40324 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas; Stenotrophomonas maltophilia group.;" source="Stenotrophomonas maltophilia (Pseudomonas maltophilia) (Xanthomonas; maltophilia).;"
phoQ; Sensor protein PhoQ (EC:2.7.13.3); K07637 two-component system, OmpR family, sensor histidine kinase PhoQ [EC:2.7.13.3] rbh
PhoQ n=1 Tax=Stenotrophomonas maltophilia RepID=B8K2M5_STEMA rbh
scnpilot_solids1_trim150_scaffold_636_11
Stenotrophomonas sp. RIT309, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(14316..14999)
DNA (684bp) protein (228aa)
Two component transcriptional regulator, winged helix family n=12 Tax=Stenotrophomonas RepID=B4ST91_STRM5 rbh
DNA-binding response regulator; K07660 two-component system, OmpR family, response regulator PhoP rbh
DNA-binding response regulator {ECO:0000313|EMBL:EZP42947.1}; TaxID=1470590 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas.;" source="Stenotrophomonas sp. RIT309.;"
scnpilot_solids1_trim150_scaffold_636_12
Xanthomonas translucens, Xanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15071..15442)
DNA (372bp) protein (124aa)
Uncharacterized protein n=1 Tax=Xanthomonas translucens pv. translucens DSM 18974 RepID=L0SUN8_XANCT
Uncharacterized protein {ECO:0000313|EMBL:CCP39809.1}; TaxID=1261556 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Xanthomonas.;" source="Xanthomonas translucens pv. translucens DSM 18974.;"
hypothetical protein
scnpilot_solids1_trim150_scaffold_636_13
Stenotrophomonas rhizophila, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15630..16667)
DNA (1038bp) protein (346aa)
tRNA-dihydrouridine synthase {ECO:0000256|PIRNR:PIRNR006621}; EC=1.-.-.- {ECO:0000256|PIRNR:PIRNR006621};; TaxID=216778 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas.;" source="Stenotrophomonas rhizophila.;"
dusA; tRNA-dihydrouridine synthase A; K05539 tRNA-dihydrouridine synthase A [EC:1.-.-.-] rbh
tRNA-dihydrouridine synthase n=1 Tax=Stenotrophomonas maltophilia SKK35 RepID=M5CTQ9_STEMA rbh
scnpilot_solids1_trim150_scaffold_636_14
Stenotrophomonas maltophilia, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16775..17128
DNA (354bp) protein (118aa)
Multidrug transporter n=1 Tax=Stenotrophomonas maltophilia MF89 RepID=T5L4Q2_STEMA
Multidrug transporter {ECO:0000313|EMBL:EQM87279.1}; TaxID=1333853 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas; Stenotrophomonas maltophilia group.;" source="Stenotrophomonas maltophilia MF89.;"
Ethidium bromide-methyl viologen resistance protein EmrE; K03297 small multidrug resistance protein, SMR family
scnpilot_solids1_trim150_scaffold_636_15
Stenotrophomonas rhizophila, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17641..19929
DNA (2289bp) protein (763aa)
5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase {ECO:0000256|HAMAP-Rule:MF_00172, ECO:0000256|SAAS:SAAS00049969}; EC=2.1.1.14 {ECO:0000256|HAMAP-Rule:MF_00172, ECO:0000256|SAAS:SAAS00050077};; Cobalamin-independent methionine synthase {ECO:0000256|HAMAP-Rule:MF_00172}; Methionine synthase, vitamin-B12 independent isozyme {ECO:0000256|HAMAP-Rule:MF_00172}; TaxID=216778 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas.;" source="
5-methyltetrahydropteroyltriglutamate/homocysteine S-methyltransferase (EC:2.1.1.14); K00549 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase [EC:2.1.1.14] rbh
5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase n=1 Tax=Stenotrophomonas maltophilia RepID=UPI0002E96A52 rbh
scnpilot_solids1_trim150_scaffold_636_16
unknown

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20671..21843
DNA (1173bp) protein (391aa)

This feature has no annotations

scnpilot_solids1_trim150_scaffold_636_17
Stenotrophomonas sp. SKA14, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(21722..25432)
DNA (3711bp) protein (1237aa)
Hemagglutinin n=1 Tax=Stenotrophomonas sp. SKA14 RepID=B8L739_9GAMM
Hemagglutinin {ECO:0000313|EMBL:EED38720.1}; TaxID=391601 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas.;" source="Stenotrophomonas sp. SKA14.;"
hemagglutinin
scnpilot_solids1_trim150_scaffold_636_18
unknown

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25500..25589
DNA (90bp) protein (30aa)

This feature has no annotations

scnpilot_solids1_trim150_scaffold_636_19
Stenotrophomonas maltophilia, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(25579..28077)
DNA (2499bp) protein (833aa)
Hemagglutinin-like protein n=1 Tax=Sphingopyxis sp. MC1 RepID=N9W099_9SPHN
Cadherin EGF LAG seven-pass G-type receptor 2 {ECO:0000313|EMBL:CCP13887.1}; TaxID=1118156 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas; Stenotrophomonas maltophilia group.;" source="Stenotrophomonas maltophilia SKK35.;"
hemagglutinin-like protein
scnpilot_solids1_trim150_scaffold_636_20
BJP_08E140C01_Burkholderiales_65_30, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

28394..28939
DNA (546bp) protein (182aa)
Microcystin dependent protein id=2658824 bin=GWF1_Xanthomonadales_69_6 species=Xanthomonas campestris genus=Xanthomonas taxon_order=Xanthomonadales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWF1_Xanthomonadales_69_6 organism_group=Gammaproteobacteria
microcystin dependent protein
Tax=BJP_08E140C01_Burkholderiales_65_30
scnpilot_solids1_trim150_scaffold_636_21
BJP_08E140C01_Burkholderiales_65_30, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

29018..29554
DNA (537bp) protein (179aa)
Microcystin dependent protein id=2658822 bin=GWF1_Xanthomonadales_69_6 species=Xanthomonas oryzae genus=Xanthomonas taxon_order=Xanthomonadales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWF1_Xanthomonadales_69_6 organism_group=Gammaproteobacteria
microcystin-dependent protein
Tax=BJP_08E140C01_Burkholderiales_65_30
scnpilot_solids1_trim150_scaffold_636_22
R_Burkholderiales_67_14, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

29639..30178
DNA (540bp) protein (180aa)
Microcystin-dependent protein id=2658819 bin=GWF1_Xanthomonadales_69_6 species=Phyllobacterium sp. YR531 genus=Phyllobacterium taxon_order=Rhizobiales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWF1_Xanthomonadales_69_6 organism_group=Gammaproteobacteria
microcystin-dependent protein
Tax=RifCSPlowO2_12_Burkholderiales_67_14_curated
scnpilot_solids1_trim150_scaffold_636_23
BJP_08E140C01_Burkholderiales_65_30, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

30180..30743
DNA (564bp) protein (188aa)
Acetyltransferase n=1 Tax=Xanthomonas campestris pv. raphani 756C RepID=G0CBQ6_XANCA
acetyltransferase
Tax=BJP_08E140C01_Burkholderiales_65_30
scnpilot_solids1_trim150_scaffold_636_24
Lysobacter daejeonensis, Lysobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(30804..31094)
DNA (291bp) protein (97aa)
hypothetical protein n=1 Tax=Stenotrophomonas maltophilia RepID=UPI00031B79AF
Uncharacterized protein {ECO:0000313|EMBL:KGM53262.1}; TaxID=1385517 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Lysobacter.;" source="Lysobacter daejeonensis GH1-9.;"
hypothetical protein
scnpilot_solids1_trim150_scaffold_636_25
Pseudoxanthomonas suwonensis, Pseudoxanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(31583..32842)
DNA (1260bp) protein (420aa)
Curli production assembly/transport component CsgG n=1 Tax=Pseudoxanthomonas suwonensis (strain 11-1) RepID=E6WPW6_PSEUU rbh
Curli production assembly/transport component CsgG rbh
Curli production assembly/transport component CsgG {ECO:0000313|EMBL:ADV26144.1}; Flags: Precursor;; TaxID=743721 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Pseudoxanthomonas.;" source="Pseudoxanthomonas suwonensis (strain 11-1).;"
scnpilot_solids1_trim150_scaffold_636_26
Rhodanobacter fulvus, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(33105..33797)
DNA (693bp) protein (231aa)
MgtC/SapB transporter n=1 Tax=Rhodanobacter fulvus Jip2 RepID=I4VS21_9GAMM
MgtC/SapB transporter {ECO:0000313|EMBL:EIL90012.1}; TaxID=1163408 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter fulvus Jip2.;"
MgtC family membrane protein; K07507 putative Mg2+ transporter-C (MgtC) family protein
scnpilot_solids1_trim150_scaffold_636_27
Stenotrophomonas maltophilia, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

33935..34558
DNA (624bp) protein (208aa)
Nicotinamidase/pyrazinamidase {ECO:0000313|EMBL:CCP14262.1}; EC=3.5.1.19 {ECO:0000313|EMBL:CCP14262.1};; TaxID=1118157 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas; Stenotrophomonas maltophilia group.;" source="Stenotrophomonas maltophilia RA8.;"
nicotinamidase (EC:3.5.1.19); K08281 nicotinamidase/pyrazinamidase [EC:3.5.1.19 3.5.1.-] rbh
Nicotinamidase/pyrazinamidase n=1 Tax=Stenotrophomonas maltophilia RA8 RepID=M5CSG3_STEMA rbh
scnpilot_solids1_trim150_scaffold_636_28
Xanthomonas sacchari, Xanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(34568..35419)
DNA (852bp) protein (284aa)
Formyltetrahydrofolate deformylase {ECO:0000256|HAMAP-Rule:MF_01927}; EC=3.5.1.10 {ECO:0000256|HAMAP-Rule:MF_01927};; Formyl-FH(4) hydrolase {ECO:0000256|HAMAP-Rule:MF_01927}; TaxID=56458 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Xanthomonas.;" source="Xanthomonas sacchari.;"
formyltetrahydrofolate deformylase; K01433 formyltetrahydrofolate deformylase [EC:3.5.1.10] rbh
formyltetrahydrofolate deformylase n=1 Tax=Xanthomonas sp. SHU199 RepID=UPI0003648202 rbh
scnpilot_solids1_trim150_scaffold_636_29
Xanthomonas translucens, Xanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(35545..36639)
DNA (1095bp) protein (365aa)
FMN oxidoreductase {ECO:0000313|EMBL:CCP39816.1}; EC=1.6.99.1 {ECO:0000313|EMBL:CCP39816.1};; TaxID=1261556 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Xanthomonas.;" source="Xanthomonas translucens pv. translucens DSM 18974.;"
FMN oxidoreductase n=1 Tax=Xanthomonas translucens pv. translucens DSM 18974 RepID=L0SYC2_XANCT rbh
NADH flavin oxidoreductase rbh
Displaying items 1-30 of 41 in total

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