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scnpilot_solids1_trim150_scaffold_677

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Displaying items 1-30 of 38 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_solids1_trim150_scaffold_677_1
Xanthomonas sacchari, Xanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1..429)
DNA (429bp) protein (143aa)
Acetyl-CoA carboxylase {ECO:0000313|EMBL:AJC46204.1}; EC=6.4.1.2 {ECO:0000313|EMBL:AJC46204.1};; TaxID=56458 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Xanthomonas.;" source="Xanthomonas sacchari.;"
accC; acetyl-CoA carboxylase biotin carboxylase subunit; K01961 acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14]
acetyl-CoA carboxylase biotin carboxylase subunit n=1 Tax=Stenotrophomonas maltophilia RepID=UPI000318B599
scnpilot_solids1_trim150_scaffold_677_2
Xanthomonas sacchari, Xanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(440..928)
DNA (489bp) protein (163aa)
Acetyl-CoA carboxylase {ECO:0000313|EMBL:AJC46202.1}; EC=6.4.1.2 {ECO:0000313|EMBL:AJC46202.1};; TaxID=56458 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Xanthomonas.;" source="Xanthomonas sacchari.;"
acetyl-CoA carboxylase biotin carboxyl carrier protein n=1 Tax=Stenotrophomonas maltophilia RepID=UPI0002DC5D0A
acetyl-CoA carboxylase, biotin carboxyl carrier protein; K02160 acetyl-CoA carboxylase biotin carboxyl carrier protein
scnpilot_solids1_trim150_scaffold_677_3
Stenotrophomonas maltophilia, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(990..1424)
DNA (435bp) protein (145aa)
aroQ1; 3-dehydroquinate dehydratase (EC:4.2.1.10); K03786 3-dehydroquinate dehydratase II [EC:4.2.1.10]
3-dehydroquinate dehydratase {ECO:0000255|HAMAP-Rule:MF_00169}; Short=3-dehydroquinase {ECO:0000255|HAMAP-Rule:MF_00169};; EC=4.2.1.10 {ECO:0000255|HAMAP-Rule:MF_00169};; Type II DHQase {ECO:0000255|HAMAP-Rule:MF_00169}; TaxID=522373 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas; Stenotrophomonas maltophilia group.;" source="Stenotrophomonas maltophilia (strain K279a).;"
3-dehydroquinate dehydratase n=3 Tax=Stenotrophomonas maltophilia RepID=AROQ_STRMK
scnpilot_solids1_trim150_scaffold_677_4
Stenotrophomonas maltophilia, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1647..2228)
DNA (582bp) protein (194aa)
thioredoxin n=1 Tax=Stenotrophomonas maltophilia RepID=UPI0002F83C45
Stenotrophomonas maltophilia strain ZBG7B contig_61, whole genome shotgun sequence {ECO:0000313|EMBL:KIP83376.1}; TaxID=40324 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas; Stenotrophomonas maltophilia group.;" source="Stenotrophomonas maltophilia (Pseudomonas maltophilia) (Xanthomonas; maltophilia).;"
alkyl hydroperoxide reductase
scnpilot_solids1_trim150_scaffold_677_5
Stenotrophomonas rhizophila, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2230..4557)
DNA (2328bp) protein (776aa)
cytochrome C biogenesis protein n=1 Tax=Stenotrophomonas maltophilia RepID=UPI0002FF0E27 rbh
Cytochrome C biogenesis protein {ECO:0000313|EMBL:AHY57478.1}; TaxID=216778 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas.;" source="Stenotrophomonas rhizophila.;"
C-type cytochrome biogenesis protein rbh
scnpilot_solids1_trim150_scaffold_677_6
Lysobacter daejeonensis, Lysobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4565..4888)
DNA (324bp) protein (108aa)
Uncharacterized protein n=1 Tax=Xanthomonas translucens pv. graminis ART-Xtg29 RepID=K8ZD67_XANCT
Uncharacterized protein {ECO:0000313|EMBL:KGM54744.1}; TaxID=1385517 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Lysobacter.;" source="Lysobacter daejeonensis GH1-9.;"
divalent cation tolerance protein
scnpilot_solids1_trim150_scaffold_677_7
Stenotrophomonas sp. RIT309, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5104..5391
DNA (288bp) protein (96aa)
10 kDa chaperonin n=5 Tax=Stenotrophomonas RepID=CH10_STRM5
10 kDa chaperonin {ECO:0000256|HAMAP-Rule:MF_00580, ECO:0000256|RuleBase:RU000535}; GroES protein {ECO:0000256|HAMAP-Rule:MF_00580}; Protein Cpn10 {ECO:0000256|HAMAP-Rule:MF_00580}; TaxID=1470590 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas.;" source="Stenotrophomonas sp. RIT309.;"
10 kDa chaperonin; K04078 chaperonin GroES
scnpilot_solids1_trim150_scaffold_677_8
Stenotrophomonas maltophilia, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5450..7093
DNA (1644bp) protein (548aa)
60 kDa chaperonin n=2 Tax=Stenotrophomonas RepID=B8L8B6_9GAMM rbh
60 kDa chaperonin {ECO:0000256|HAMAP-Rule:MF_00600, ECO:0000256|RuleBase:RU000419}; GroEL protein {ECO:0000256|HAMAP-Rule:MF_00600}; Protein Cpn60 {ECO:0000256|HAMAP-Rule:MF_00600}; TaxID=1118156 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas; Stenotrophomonas maltophilia group.;" source="Stenotrophomonas maltophilia SKK35.;"
60 kDa chaperonin; K04077 chaperonin GroEL rbh
scnpilot_solids1_trim150_scaffold_677_9
Lysobacter arseniciresistens, Lysobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7176..7622)
DNA (447bp) protein (149aa)
thioredoxin; K03672 thioredoxin 2 [EC:1.8.1.8]
Thioredoxin n=1 Tax=Pseudoxanthomonas spadix (strain BD-a59) RepID=G7USM3_PSEUP
Thioredoxin {ECO:0000313|EMBL:KGM57764.1}; TaxID=913325 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Lysobacter.;" source="Lysobacter arseniciresistens ZS79.;"
scnpilot_solids1_trim150_scaffold_677_10
Xanthomonas translucens, Xanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7929..9002
DNA (1074bp) protein (358aa)
Phospho-2-dehydro-3-deoxyheptonate aldolase {ECO:0000256|PIRNR:PIRNR001361}; EC=2.5.1.54 {ECO:0000256|PIRNR:PIRNR001361};; 3-deoxy-D-arabino-heptulosonate 7-phosphate synthase {ECO:0000256|PIRNR:PIRNR001361}; DAHP synthase {ECO:0000256|PIRNR:PIRNR001361}; Phospho-2-keto-3-deoxyheptonate aldolase {ECO:0000256|PIRNR:PIRNR001361}; TaxID=1205753 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Xanthomonas.;" source="Xanthomonas translucens DAR61454.;"
phospho-2-dehydro-3-deoxyheptonate aldolase (EC:2.5.1.54); K01626 3-deoxy-7-phosphoheptulonate synthase [EC:2.5.1.54] rbh
Phospho-2-dehydro-3-deoxyheptonate aldolase n=1 Tax=Xanthomonas translucens DAR61454 RepID=L7GK84_XANCT rbh
scnpilot_solids1_trim150_scaffold_677_11
unknown

Not on your lists

9150..9593
DNA (444bp) protein (148aa)

This feature has no annotations

scnpilot_solids1_trim150_scaffold_677_12
Stenotrophomonas maltophilia, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9612..9872
DNA (261bp) protein (87aa)
Putative endonuclease containing a URI domain n=1 Tax=Stenotrophomonas maltophilia D457 RepID=I0KTB7_STEMA
putative endonuclease containing a URI domain; K07461 putative endonuclease
Nuclease {ECO:0000313|EMBL:KDE90542.1}; TaxID=1451188 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas; Stenotrophomonas maltophilia group.;" source="Stenotrophomonas maltophilia M30.;"
scnpilot_solids1_trim150_scaffold_677_13
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10005..10343
DNA (339bp) protein (113aa)
Protein YegP n=1 Tax=Enterobacter cloacae subsp. dissolvens SDM RepID=I6SKX6_ENTCL
protein YegP
Uncharacterized protein {ECO:0000313|EMBL:ETX63641.1}; TaxID=1400137 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii UCI 32.;"
scnpilot_solids1_trim150_scaffold_677_14
Stenotrophomonas rhizophila, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10413..11927)
DNA (1515bp) protein (505aa)
succinate CoA transferase (EC:3.1.2.1); K01067 acetyl-CoA hydrolase [EC:3.1.2.1] rbh
acetyl-CoA hydrolase n=1 Tax=Stenotrophomonas maltophilia RepID=UPI0002FCFAD7 rbh
Acetyl-CoA hydrolase {ECO:0000313|EMBL:AHY60543.1}; TaxID=216778 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas.;" source="Stenotrophomonas rhizophila.;"
scnpilot_solids1_trim150_scaffold_677_15
CG_Rhodof_04, Rhodoferax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12232..12660)
DNA (429bp) protein (143aa)
Ribonuclease VapC n=1 Tax=Leptospirillum ferriphilum (strain ML-04) RepID=J9ZDJ7_LEPFM
hypothetical protein
Tax=CG_Rhodof_04
scnpilot_solids1_trim150_scaffold_677_16
CG_Rhodof_02, Rhodoferax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12660..12911)
DNA (252bp) protein (84aa)
Uncharacterized protein n=1 Tax=Aromatoleum aromaticum (strain EbN1) RepID=Q5NZQ3_AROAE
hypothetical protein
Tax=CG_Rhodof_02
scnpilot_solids1_trim150_scaffold_677_17
Stenotrophomonas rhizophila, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13012..15831
DNA (2820bp) protein (940aa)
Glutamate-ammonia-ligase adenylyltransferase {ECO:0000256|HAMAP-Rule:MF_00802, ECO:0000256|SAAS:SAAS00015000}; EC=2.7.7.42 {ECO:0000256|HAMAP-Rule:MF_00802, ECO:0000256|SAAS:SAAS00015004};; Glutamine-synthase adenylyltransferase {ECO:0000256|HAMAP-Rule:MF_00802}; [Glutamate--ammonia-ligase] adenylyltransferase {ECO:0000256|HAMAP-Rule:MF_00802}; TaxID=216778 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas.;" source="Stenotrophomonas rhizophila.;"
glnE; putative glutamate-ammonia-ligase adenylyltransferase (EC:2.7.7.42); K00982 glutamate-ammonia-ligase adenylyltransferase [EC:2.7.7.42] rbh
glutamate-ammonia ligase adenylyltransferase n=1 Tax=Stenotrophomonas maltophilia RepID=UPI00037582BB rbh
scnpilot_solids1_trim150_scaffold_677_18
Stenotrophomonas rhizophila, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15856..16410)
DNA (555bp) protein (185aa)
membrane protein n=1 Tax=Stenotrophomonas maltophilia RepID=UPI000319CDA5 rbh
Membrane protein {ECO:0000313|EMBL:AHY60540.1}; TaxID=216778 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas.;" source="Stenotrophomonas rhizophila.;"
Putative preQ0 transporter; K09125 hypothetical protein rbh
scnpilot_solids1_trim150_scaffold_677_19
Xanthomonas gardneri, Xanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16572..17090)
DNA (519bp) protein (173aa)
Putative uncharacterized protein n=1 Tax=Xanthomonas gardneri ATCC 19865 RepID=F0C4Z3_9XANT
Uncharacterized protein {ECO:0000313|EMBL:EGD19413.1}; Flags: Precursor;; TaxID=925777 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Xanthomonas.;" source="Xanthomonas gardneri ATCC 19865.;"
hypothetical protein
scnpilot_solids1_trim150_scaffold_677_20
Stenotrophomonas rhizophila, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17108..17956)
DNA (849bp) protein (283aa)
Putative uncharacterized protein n=1 Tax=Xanthomonas vesicatoria ATCC 35937 RepID=F0BH95_9XANT rbh
Membrane protein {ECO:0000313|EMBL:AHY60537.1}; TaxID=216778 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas.;" source="Stenotrophomonas rhizophila.;"
hypothetical protein rbh
scnpilot_solids1_trim150_scaffold_677_21
Stenotrophomonas rhizophila, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17993..18967)
DNA (975bp) protein (325aa)
nucleoside-diphosphate-sugar epimerase n=1 Tax=Stenotrophomonas maltophilia RepID=UPI0003076BB0 rbh
Nucleoside-diphosphate sugar epimerase {ECO:0000313|EMBL:AHY60536.1}; TaxID=216778 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas.;" source="Stenotrophomonas rhizophila.;"
hypothetical protein; K07276 hypothetical protein rbh
scnpilot_solids1_trim150_scaffold_677_22
Xanthomonas sacchari, Xanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19098..19688
DNA (591bp) protein (197aa)
Putative NADH dehydrogenase/NAD(P)H nitroreductase SB85_10765 {ECO:0000256|HAMAP-Rule:MF_01204}; EC=1.-.-.- {ECO:0000256|HAMAP-Rule:MF_01204};; TaxID=56458 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Xanthomonas.;" source="Xanthomonas sacchari.;"
rutE; nitroreductase (EC:1.-.-.-); K09019 3-hydroxypropanoate dehydrogenase [EC:1.1.1.-] rbh
malonic semialdehyde reductase n=1 Tax=Xanthomonas RepID=UPI000262B53D rbh
scnpilot_solids1_trim150_scaffold_677_23
Stenotrophomonas maltophilia, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19775..20464
DNA (690bp) protein (230aa)
hypothetical protein n=7 Tax=Xanthomonas axonopodis RepID=UPI000300A597 rbh
hypothetical protein rbh
YceI family protein {ECO:0000313|EMBL:ACF50064.1}; Flags: Precursor;; TaxID=391008 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas; Stenotrophomonas maltophilia group.;" source="Stenotrophomonas maltophilia (strain R551-3).;"
scnpilot_solids1_trim150_scaffold_677_24
Stenotrophomonas maltophilia, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20574..21023)
DNA (450bp) protein (150aa)
Uncharacterized protein n=1 Tax=Stenotrophomonas maltophilia MF89 RepID=T5KUE9_STEMA
Uncharacterized protein {ECO:0000313|EMBL:EQM82631.1}; TaxID=1333853 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas; Stenotrophomonas maltophilia group.;" source="Stenotrophomonas maltophilia MF89.;"
hypothetical protein
scnpilot_solids1_trim150_scaffold_677_25
Stenotrophomonas maltophilia, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21093..21404)
DNA (312bp) protein (104aa)
hypothetical protein n=1 Tax=Xanthomonadaceae RepID=UPI00029A6FF1
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EJP79733.1}; TaxID=1183154 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas; Stenotrophomonas maltophilia group.;" source="Stenotrophomonas maltophilia Ab55555.;"
scnpilot_solids1_trim150_scaffold_677_26
Stenotrophomonas rhizophila, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21475..22266)
DNA (792bp) protein (264aa)
iron utilization protein n=1 Tax=Stenotrophomonas maltophilia RepID=UPI0003127A17 rbh
Iron utilization protein {ECO:0000313|EMBL:AHY60530.1}; TaxID=216778 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas.;" source="Stenotrophomonas rhizophila.;"
iron-chelator utilization protein rbh
scnpilot_solids1_trim150_scaffold_677_27
Stenotrophomonas rhizophila, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22291..22800)
DNA (510bp) protein (170aa)
PadR-like family transcriptional regulator n=1 Tax=Stenotrophomonas maltophilia AU12-09 RepID=M5U161_STEMA
PadR family transcriptional regulator {ECO:0000313|EMBL:AHY60529.1}; TaxID=216778 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas.;" source="Stenotrophomonas rhizophila.;"
PadR-like family transcriptional regulator
scnpilot_solids1_trim150_scaffold_677_28
Stenotrophomonas rhizophila, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24704..25888
DNA (1185bp) protein (395aa)
Pyruvate dehydrogenase E1 component {ECO:0000256|PIRNR:PIRNR000156}; EC=1.2.4.1 {ECO:0000256|PIRNR:PIRNR000156};; TaxID=216778 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas.;" source="Stenotrophomonas rhizophila.;"
aceE; pyruvate dehydrogenase subunit E1 (EC:1.2.4.1); K00163 pyruvate dehydrogenase E1 component [EC:1.2.4.1]
pyruvate dehydrogenase n=1 Tax=Stenotrophomonas maltophilia RepID=UPI00037847EF
scnpilot_solids1_trim150_scaffold_677_29
Enterobacter cloacae, Enterobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

26042..27136
DNA (1095bp) protein (365aa)
Cytosine-specific methyltransferase {ECO:0000256|RuleBase:RU000417}; EC=2.1.1.37 {ECO:0000256|RuleBase:RU000417};; TaxID=550 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Enterobacter; Enterobacter cloacae complex.;" source="Enterobacter cloacae.;"
Cytosine-specific methyltransferase n=2 Tax=Salmonella enterica subsp. enterica serovar Weltevreden RepID=E9AA22_SALET rbh
Modification methylase FnuDI rbh
scnpilot_solids1_trim150_scaffold_677_30
RLO_Burkholderiales_61_40, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

27304..30288
DNA (2985bp) protein (995aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium ASF500 RepID=V2ZDC3_9FIRM rbh
hypothetical protein rbh
Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_61_40_curated
Displaying items 1-30 of 38 in total

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