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scnpilot_solids1_trim150_scaffold_891

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Displaying 17 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_solids1_trim150_scaffold_891_1
unknown

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1..105
DNA (105bp) protein (35aa)
N-formylglutamate amidohydrolase n=1 Tax=Xanthomonas sp. SHU199 RepID=UPI00036059D3
scnpilot_solids1_trim150_scaffold_891_2
unknown

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comp(165..290)
DNA (126bp) protein (42aa)

This feature has no annotations

scnpilot_solids1_trim150_scaffold_891_3
Stenotrophomonas maltophilia, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(287..1699)
DNA (1413bp) protein (471aa)
MFS transporter n=1 Tax=Stenotrophomonas maltophilia AU12-09 RepID=M5U0F3_STEMA rbh
MFS transporter {ECO:0000313|EMBL:EMI51326.1}; TaxID=1235458 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas; Stenotrophomonas maltophilia group.;" source="Stenotrophomonas maltophilia AU12-09.;"
major facilitator superfamily protein rbh
scnpilot_solids1_trim150_scaffold_891_4
Stenotrophomonas maltophilia, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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1779..2690
DNA (912bp) protein (304aa)
Uncharacterized protein n=1 Tax=Stenotrophomonas maltophilia Ab55555 RepID=J7VJA1_STEMA rbh
Uncharacterized protein {ECO:0000313|EMBL:EJP78339.1}; TaxID=1183154 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas; Stenotrophomonas maltophilia group.;" source="Stenotrophomonas maltophilia Ab55555.;"
putative LysR family transcriptional regulator rbh
scnpilot_solids1_trim150_scaffold_891_5
Stenotrophomonas maltophilia, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(2745..3689)
DNA (945bp) protein (315aa)
Proline iminopeptidase {ECO:0000256|RuleBase:RU003421}; EC=3.4.11.5 {ECO:0000256|RuleBase:RU003421};; TaxID=40324 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas; Stenotrophomonas maltophilia group.;" source="Stenotrophomonas maltophilia (Pseudomonas maltophilia) (Xanthomonas; maltophilia).;"
pip; putative proline iminopeptidase (EC:3.4.11.5); K01259 proline iminopeptidase [EC:3.4.11.5] rbh
proline iminopeptidase n=1 Tax=Stenotrophomonas maltophilia RepID=UPI000319E54B rbh
scnpilot_solids1_trim150_scaffold_891_6
Xanthomonas campestris, Xanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(3767..6739)
DNA (2973bp) protein (991aa)
diguanylate cyclase n=1 Tax=Xanthomonas sp. SHU308 RepID=UPI00037BB2A9 rbh
putative signal protein with GGDEF, PAS and PAC domains rbh
Putative signal protein with GGDEF, PAS and PAC domains {ECO:0000313|EMBL:AEL08526.1}; TaxID=990315 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Xanthomonas.;" source="Xanthomonas campestris pv. raphani 756C.;"
scnpilot_solids1_trim150_scaffold_891_7
Stenotrophomonas rhizophila, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(6856..10017)
DNA (3162bp) protein (1054aa)
Acr/RND family transmembrane transporter n=1 Tax=Stenotrophomonas maltophilia RepID=UPI00030538DD rbh
Multidrug transporter AcrB {ECO:0000313|EMBL:AHY57793.1}; TaxID=216778 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas.;" source="Stenotrophomonas rhizophila.;"
smeP; putative drug-resistance cell envelope-like protein rbh
scnpilot_solids1_trim150_scaffold_891_8
Stenotrophomonas maltophilia, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(10021..11142)
DNA (1122bp) protein (374aa)
RND transporter n=1 Tax=Stenotrophomonas maltophilia RepID=UPI0002E4588B rbh
RND family efflux transporter MFP subunit rbh
Efflux transporter, RND family, MFP subunit {ECO:0000313|EMBL:ACF53039.1}; Flags: Precursor;; TaxID=391008 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas; Stenotrophomonas maltophilia group.;" source="Stenotrophomonas maltophilia (strain R551-3).;"
scnpilot_solids1_trim150_scaffold_891_9
Stenotrophomonas maltophilia, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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11250..11915
DNA (666bp) protein (222aa)
TetR family transcriptional regulator n=1 Tax=Stenotrophomonas maltophilia RepID=UPI0002DE58A6 rbh
TetR family transcriptional regulator rbh
Transcriptional regulator, TetR family {ECO:0000313|EMBL:CCH14043.1}; TaxID=1163399 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas; Stenotrophomonas maltophilia group.;" source="Stenotrophomonas maltophilia D457.;"
scnpilot_solids1_trim150_scaffold_891_10
Stenotrophomonas rhizophila, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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12046..12693
DNA (648bp) protein (216aa)
pcm2; protein-L-isoaspartate O-methyltransferase (EC:2.1.1.77); K00573 protein-L-isoaspartate(D-aspartate) O-methyltransferase [EC:2.1.1.77] rbh
protein-L-isoaspartate O-methyltransferase n=1 Tax=Stenotrophomonas maltophilia RepID=UPI00031DDC39 rbh
Protein-L-isoaspartate O-methyltransferase {ECO:0000313|EMBL:AHY57790.1}; TaxID=216778 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas.;" source="Stenotrophomonas rhizophila.;"
scnpilot_solids1_trim150_scaffold_891_11
Stenotrophomonas maltophilia, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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12718..14076
DNA (1359bp) protein (453aa)
TolC family type I secretion outer membrane protein n=2 Tax=Stenotrophomonas maltophilia RepID=M5THL3_STEMA rbh
Protein CyaE {ECO:0000256|PIRNR:PIRNR001892}; TaxID=1235458 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas; Stenotrophomonas maltophilia group.;" source="Stenotrophomonas maltophilia AU12-09.;"
tolC; Type I secretion outer membrane protein, TolC precursor; K12340 outer membrane channel protein rbh
scnpilot_solids1_trim150_scaffold_891_12
Stenotrophomonas sp. RIT309, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(14177..15472)
DNA (1296bp) protein (432aa)
3-deoxy-D-manno-octulosonic-acid transferase {ECO:0000313|EMBL:EZP46756.1}; EC=2.-.-.- {ECO:0000313|EMBL:EZP46756.1};; TaxID=1470590 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas.;" source="Stenotrophomonas sp. RIT309.;"
3-deoxy-D-manno-octulosonic-acid transferase; K02527 3-deoxy-D-manno-octulosonic-acid transferase [EC:2.4.99.12 2.4.99.13 2.4.99.14 2.4.99.15] rbh
3-deoxy-D-manno-octulosonic-acid transferase n=1 Tax=Stenotrophomonas sp. SKA14 RepID=B8L915_9GAMM rbh
scnpilot_solids1_trim150_scaffold_891_13
Xanthomonas sacchari, Xanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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15594..16520
DNA (927bp) protein (309aa)
Lipid A biosynthesis lauroyltransferase {ECO:0000256|HAMAP-Rule:MF_01942}; EC=2.3.1.241 {ECO:0000256|HAMAP-Rule:MF_01942};; Kdo(2)-lipid IV(A) lauroyltransferase {ECO:0000256|HAMAP-Rule:MF_01942}; TaxID=56458 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Xanthomonas.;" source="Xanthomonas sacchari.;"
waaM; lipid A biosynthesis lauroyl acyltransferase; K02517 lipid A biosynthesis lauroyl acyltransferase [EC:2.3.1.-] rbh
lauroyl acyltransferase n=1 Tax=Xanthomonas sacchari RepID=UPI000263037B rbh
scnpilot_solids1_trim150_scaffold_891_14
Lysobacter arseniciresistens, Lysobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(16508..17851)
DNA (1344bp) protein (448aa)
membrane protein n=1 Tax=Stenotrophomonas maltophilia RepID=UPI0003050B80 rbh
Membrane protein {ECO:0000313|EMBL:KGM56482.1}; TaxID=913325 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Lysobacter.;" source="Lysobacter arseniciresistens ZS79.;"
membrane protein
scnpilot_solids1_trim150_scaffold_891_15
Stenotrophomonas sp. SKA14, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(17832..18944)
DNA (1113bp) protein (371aa)
Glycosyl transferase n=1 Tax=Stenotrophomonas sp. SKA14 RepID=B8L911_9GAMM rbh
Glycosyl transferase {ECO:0000313|EMBL:EED39524.1}; TaxID=391601 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas.;" source="Stenotrophomonas sp. SKA14.;"
group 1 glycosyl transferase rbh
scnpilot_solids1_trim150_scaffold_891_16
Stenotrophomonas maltophilia, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(18953..19150)
DNA (198bp) protein (66aa)
Uncharacterized protein n=9 Tax=Stenotrophomonas RepID=B2FTT1_STRMK
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:KDE89512.1}; TaxID=1451188 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas; Stenotrophomonas maltophilia group.;" source="Stenotrophomonas maltophilia M30.;"
scnpilot_solids1_trim150_scaffold_891_17
unknown

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19236..19421
DNA (186bp) protein (62aa)

This feature has no annotations

Displaying 17 items

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