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scnpilot_solids1_trim150_scaffold_5784

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Displaying 9 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_solids1_trim150_scaffold_5784_1
Stenotrophomonas rhizophila, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(2..484)
DNA (483bp) protein (161aa)
Uncharacterized protein n=1 Tax=Stenotrophomonas maltophilia Ab55555 RepID=J7VLT6_STEMA
Multidrug DMT transporter permease {ECO:0000313|EMBL:AHY59216.1}; TaxID=216778 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas.;" source="Stenotrophomonas rhizophila.;"
putative transmembrane protein
scnpilot_solids1_trim150_scaffold_5784_2
Stenotrophomonas maltophilia, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(568..1305)
DNA (738bp) protein (246aa)
HTH-type transcriptional activator rhaS n=1 Tax=Stenotrophomonas maltophilia RA8 RepID=M5CZ13_STEMA
HTH-type transcriptional activator rhaS {ECO:0000313|EMBL:CCP16311.1}; TaxID=1118157 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas; Stenotrophomonas maltophilia group.;" source="Stenotrophomonas maltophilia RA8.;"
AraC family transcriptional regulator
scnpilot_solids1_trim150_scaffold_5784_trna_1
unknown

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comp(1328..1401)
DNA (74bp)
transferRNA Arg
scnpilot_solids1_trim150_scaffold_5784_3
[Flavobacterium] lutescens, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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1554..3023
DNA (1470bp) protein (490aa)
aldehyde dehydrogenase; K00128 aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] rbh
Piperideine-6-carboxylate dehydrogenase n=1 Tax=Flavobacterium lutescens RepID=Q9F1U8_FLALU rbh
Piperideine-6-carboxylate dehydrogenase {ECO:0000313|EMBL:BAB19801.1}; TaxID=255 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Flavobacterium lutescens.;"
scnpilot_solids1_trim150_scaffold_5784_4
Xanthomonas campestris, Xanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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3237..3524
DNA (288bp) protein (96aa)
membrane protein n=1 Tax=Xanthomonas arboricola RepID=UPI00030F0B1E
Membrane protein {ECO:0000313|EMBL:AKC78018.1}; TaxID=339 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Xanthomonas.;" source="Xanthomonas campestris.;"
hypothetical protein
scnpilot_solids1_trim150_scaffold_5784_5
Stenotrophomonas rhizophila, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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3532..4302
DNA (771bp) protein (257aa)
Methyltransferase (EC:2.1.1.-) rbh
Methyltransferase n=1 Tax=Stenotrophomonas maltophilia MF89 RepID=T5KTE5_STEMA rbh
Methyltransferase {ECO:0000313|EMBL:AHY59254.1}; TaxID=216778 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas.;" source="Stenotrophomonas rhizophila.;"
scnpilot_solids1_trim150_scaffold_5784_6
Stenotrophomonas rhizophila, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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4308..5363
DNA (1056bp) protein (352aa)
Dihydroorotate dehydrogenase (quinone) {ECO:0000256|HAMAP-Rule:MF_00225, ECO:0000256|SAAS:SAAS00054567}; EC=1.3.5.2 {ECO:0000256|HAMAP-Rule:MF_00225, ECO:0000256|SAAS:SAAS00084821};; DHOdehase {ECO:0000256|HAMAP-Rule:MF_00225}; Dihydroorotate oxidase {ECO:0000256|HAMAP-Rule:MF_00225}; TaxID=216778 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas.;" source="Stenotrophomonas rhizophila.;"
dihydroorotate dehydrogenase (EC:1.3.98.1); K00226 dihydroorotate dehydrogenase (fumarate) [EC:1.3.98.1] rbh
dihydroorotate dehydrogenase n=1 Tax=Stenotrophomonas maltophilia RepID=UPI0002F1A72F rbh
scnpilot_solids1_trim150_scaffold_5784_7
Stenotrophomonas maltophilia, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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5360..6400
DNA (1041bp) protein (347aa)
murB; UDP-N-acetylenolpyruvoylglucosamine reductase (EC:1.1.1.158); K00075 UDP-N-acetylmuramate dehydrogenase [EC:1.1.1.158] rbh
UDP-N-acetylenolpyruvoylglucosamine reductase {ECO:0000256|HAMAP-Rule:MF_00037, ECO:0000256|SAAS:SAAS00041869}; EC=1.3.1.98 {ECO:0000256|HAMAP-Rule:MF_00037, ECO:0000256|SAAS:SAAS00057125};; UDP-N-acetylmuramate dehydrogenase {ECO:0000256|HAMAP-Rule:MF_00037}; Flags: Precursor;; TaxID=391008 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas; Stenotrophomonas maltophilia group.;" source="Stenotrophomonas maltophilia (strain R551-3).;"
UDP-N-acetylenolpyruvoylglucosamine reductase n=1 Tax=Stenotrophomonas maltophilia RepID=UPI000311A5FD rbh
scnpilot_solids1_trim150_scaffold_5784_8
Stenotrophomonas maltophilia, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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6397..7173
DNA (777bp) protein (259aa)
Integral membrane protein n=1 Tax=Stenotrophomonas maltophilia EPM1 RepID=M3FF41_STEMA rbh
Uncharacterized protein {ECO:0000313|EMBL:EJP77268.1}; TaxID=1183154 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas; Stenotrophomonas maltophilia group.;" source="Stenotrophomonas maltophilia Ab55555.;"
putative transmembrane protein; K15270 S-adenosylmethionine uptake transporter rbh
Displaying 9 items

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