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scnpilot_solids1_trim150_scaffold_1032

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Displaying 15 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_solids1_trim150_scaffold_1032_1
Stenotrophomonas rhizophila, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(3..3356)
DNA (3354bp) protein (1118aa)
pathogenicity protein n=1 Tax=Stenotrophomonas maltophilia RepID=UPI0002F5093E rbh
Pathogenicity protein {ECO:0000313|EMBL:AHY57105.1}; TaxID=216778 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas.;" source="Stenotrophomonas rhizophila.;"
hypothetical protein; K09800 hypothetical protein rbh
scnpilot_solids1_trim150_scaffold_1032_2
Stenotrophomonas maltophilia, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3582..5405)
DNA (1824bp) protein (608aa)
membrane protein n=1 Tax=Stenotrophomonas maltophilia RepID=UPI0002F6CF2E rbh
putative surface antigen exported protein; K07278 outer membrane protein rbh
WGS project CALN00000000 data, contig 1391 {ECO:0000313|EMBL:CCP13834.1}; TaxID=1118156 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas; Stenotrophomonas maltophilia group.;" source="Stenotrophomonas maltophilia SKK35.;"
scnpilot_solids1_trim150_scaffold_1032_3
Xanthomonas sacchari, Xanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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5567..8341
DNA (2775bp) protein (925aa)
Outer membrane receptor for ferrienterochelin and colicins n=1 Tax=Xanthomonas perforans 91-118 RepID=F0BNJ7_9XANT rbh
TonB-dependent receptor {ECO:0000313|EMBL:AJC46399.1}; TaxID=56458 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Xanthomonas.;" source="Xanthomonas sacchari.;"
TonB-dependent outer membrane receptor rbh
scnpilot_solids1_trim150_scaffold_1032_4
Xanthomonas campestris, Xanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8394..9956)
DNA (1563bp) protein (521aa)
hypothetical protein n=1 Tax=Xanthomonas campestris RepID=UPI0001CBF2FC rbh
Uncharacterized protein {ECO:0000313|EMBL:KFA05829.1}; TaxID=1094183 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Xanthomonas.;" source="Xanthomonas campestris pv. musacearum NCPPB 2005.;"
TPR-repeat-containing protein rbh
scnpilot_solids1_trim150_scaffold_1032_5
Stenotrophomonas sp. RIT309, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(9960..12032)
DNA (2073bp) protein (691aa)
Glycine--tRNA ligase beta subunit {ECO:0000256|HAMAP-Rule:MF_00255, ECO:0000256|SAAS:SAAS00039777}; EC=6.1.1.14 {ECO:0000256|HAMAP-Rule:MF_00255, ECO:0000256|SAAS:SAAS00039811};; Glycyl-tRNA synthetase beta subunit {ECO:0000256|HAMAP-Rule:MF_00255}; TaxID=1470590 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas.;" source="Stenotrophomonas sp. RIT309.;"
glyS; glycyl-tRNA synthetase subunit beta (EC:6.1.1.14); K01879 glycyl-tRNA synthetase beta chain [EC:6.1.1.14] rbh
glycyl-tRNA synthetase subunit beta n=1 Tax=Stenotrophomonas maltophilia RepID=UPI0003064B16 rbh
scnpilot_solids1_trim150_scaffold_1032_6
Stenotrophomonas rhizophila, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12029..12940)
DNA (912bp) protein (304aa)
Glycine--tRNA ligase alpha subunit {ECO:0000256|HAMAP-Rule:MF_00254, ECO:0000256|SAAS:SAAS00104892}; EC=6.1.1.14 {ECO:0000256|HAMAP-Rule:MF_00254, ECO:0000256|SAAS:SAAS00104898};; Glycyl-tRNA synthetase alpha subunit {ECO:0000256|HAMAP-Rule:MF_00254}; TaxID=216778 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas.;" source="Stenotrophomonas rhizophila.;"
glycyl-tRNA synthetase subunit alpha (EC:6.1.1.14); K01878 glycyl-tRNA synthetase alpha chain [EC:6.1.1.14] rbh
glycyl-tRNA synthetase n=1 Tax=Stenotrophomonas maltophilia RepID=UPI00030A596E rbh
scnpilot_solids1_trim150_scaffold_1032_7
Stenotrophomonas sp. RIT309, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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13017..14831
DNA (1815bp) protein (605aa)
Type II secretory pathway ATPase n=1 Tax=Xanthomonas gardneri ATCC 19865 RepID=F0C1P6_9XANT rbh
Type II secretory pathway, ATPase PulE/Tfp pilus assembly pathway, ATPase PilB {ECO:0000313|EMBL:EZP44349.1}; TaxID=1470590 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas.;" source="Stenotrophomonas sp. RIT309.;"
type II secretory pathway ATPase; K02454 general secretion pathway protein E rbh
scnpilot_solids1_trim150_scaffold_1032_8
Xanthomonas campestris, Xanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14828..15547
DNA (720bp) protein (240aa)
guaA2; glutamine amidotransferase (EC:6.3.5.2); K01951 GMP synthase (glutamine-hydrolysing) [EC:6.3.5.2] rbh
Strain LMCP11 contig_9, whole genome shotgun sequence {ECO:0000313|EMBL:KIQ28028.1}; EC=6.3.5.2 {ECO:0000313|EMBL:KIQ28028.1};; TaxID=339 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Xanthomonas.;" source="Xanthomonas campestris.;"
glutamine amidotransferase n=1 Tax=Stenotrophomonas maltophilia RepID=UPI0003649773 rbh
scnpilot_solids1_trim150_scaffold_1032_9
Xanthomonas campestris, Xanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15697..16590
DNA (894bp) protein (298aa)
Putative uncharacterized protein n=3 Tax=Xanthomonas campestris pv. campestris RepID=Q4UP04_XANC8 rbh
hypothetical protein rbh
Hypothetical membrane protein {ECO:0000313|EMBL:CAP53664.1}; TaxID=509169 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Xanthomonas.;" source="Xanthomonas campestris pv. campestris (strain B100).;"
scnpilot_solids1_trim150_scaffold_1032_10
Stenotrophomonas maltophilia, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16672..17415)
DNA (744bp) protein (248aa)
Sec-independent protein translocase protein TatC n=1 Tax=Stenotrophomonas maltophilia MF89 RepID=T5K049_STEMA rbh
Sec-independent protein translocase protein TatC {ECO:0000256|HAMAP-Rule:MF_00902}; TaxID=40324 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas; Stenotrophomonas maltophilia group.;" source="Stenotrophomonas maltophilia (Pseudomonas maltophilia) (Xanthomonas; maltophilia).;"
tatC; Twin-arginine translocation protein TatC; K03118 sec-independent protein translocase protein TatC rbh
scnpilot_solids1_trim150_scaffold_1032_11
Xanthomonas translucens, Xanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17412..17852)
DNA (441bp) protein (147aa)
Sec-independent protein translocase protein TatB n=1 Tax=Xanthomonas translucens pv. translucens DSM 18974 RepID=L0SXA5_XANCT
Sec-independent protein translocase protein TatB {ECO:0000256|HAMAP-Rule:MF_00237, ECO:0000256|SAAS:SAAS00028234}; TaxID=1261556 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Xanthomonas.;" source="Xanthomonas translucens pv. translucens DSM 18974.;"
twin-arginine translocation protein subunit TatB; K03117 sec-independent protein translocase protein TatB
scnpilot_solids1_trim150_scaffold_1032_12
Xanthomonas campestris, Xanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17869..18096)
DNA (228bp) protein (76aa)
Sec-independent protein translocase protein TatA n=4 Tax=Xanthomonas campestris RepID=TATA_XANC8
hypothetical protein; K03116 sec-independent protein translocase protein TatA
Sec-independent protein translocase protein TatA {ECO:0000255|HAMAP-Rule:MF_00236}; TaxID=190485 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Xanthomonas.;" source="Xanthomonas campestris pv. campestris (strain ATCC 33913 / DSM 3586 /; NCPPB 528 / LMG 568 / P 25).;"
scnpilot_solids1_trim150_scaffold_1032_13
Stenotrophomonas maltophilia, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18172..19071)
DNA (900bp) protein (300aa)
hypothetical protein n=1 Tax=Stenotrophomonas maltophilia RepID=UPI000311B447 rbh
hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:EJP78504.1}; TaxID=1183154 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas; Stenotrophomonas maltophilia group.;" source="Stenotrophomonas maltophilia Ab55555.;"
scnpilot_solids1_trim150_scaffold_1032_14
Stenotrophomonas maltophilia, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19259..20221
DNA (963bp) protein (321aa)
ferrochelatase (EC:4.99.1.1); K01772 ferrochelatase [EC:4.99.1.1] rbh
Ferrochelatase {ECO:0000256|HAMAP-Rule:MF_00323, ECO:0000256|RuleBase:RU000607}; EC=4.99.1.1 {ECO:0000256|HAMAP-Rule:MF_00323, ECO:0000256|RuleBase:RU000607};; Heme synthase {ECO:0000256|HAMAP-Rule:MF_00323}; Protoheme ferro-lyase {ECO:0000256|HAMAP-Rule:MF_00323}; TaxID=868597 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas; Stenotrophomonas maltophilia group.;" source="Stenotrophomonas maltophilia JV3.;"
ferrochelatase n=1 Tax=Stenotrophomonas maltophilia RepID=UPI0002D2894B rbh
scnpilot_solids1_trim150_scaffold_1032_15
Stenotrophomonas rhizophila, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20218..20520
DNA (303bp) protein (101aa)
hydrolase n=1 Tax=Stenotrophomonas maltophilia RepID=UPI00031CBB2E
Hydrolase {ECO:0000313|EMBL:AHY57093.1}; TaxID=216778 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas.;" source="Stenotrophomonas rhizophila.;"
alpha/beta hydrolase fold domain-containing protein
Displaying 15 items

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