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scnpilot_solids1_trim150_scaffold_1403

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Displaying 12 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_solids1_trim150_scaffold_1403_1
Stenotrophomonas maltophilia, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(41..1921)
DNA (1881bp) protein (627aa)
Propionate--CoA ligase {ECO:0000313|EMBL:CCH11401.1}; EC=6.2.1.17 {ECO:0000313|EMBL:CCH11401.1};; TaxID=1163399 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas; Stenotrophomonas maltophilia group.;" source="Stenotrophomonas maltophilia D457.;"
prpE; propionate--CoA ligase (EC:6.2.1.17); K01908 propionyl-CoA synthetase [EC:6.2.1.17] rbh
acetyl-CoA synthetase n=1 Tax=Stenotrophomonas maltophilia RepID=UPI0003716C39 rbh
scnpilot_solids1_trim150_scaffold_1403_2
Stenotrophomonas sp. SKA14, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(2028..2642)
DNA (615bp) protein (205aa)
pseudouridine synthase; K06177 tRNA pseudouridine32 synthase / 23S rRNA pseudouridine746 synthase [EC:5.4.99.28 5.4.99.29] rbh
Ribosomal large subunit pseudouridine synthase A n=1 Tax=Stenotrophomonas sp. SKA14 RepID=B8L096_9GAMM rbh
Ribosomal large subunit pseudouridine synthase A {ECO:0000313|EMBL:EED38108.1}; TaxID=391601 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas.;" source="Stenotrophomonas sp. SKA14.;"
scnpilot_solids1_trim150_scaffold_1403_3
Xanthomonas vasicola, Xanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(2774..3757)
DNA (984bp) protein (328aa)
Malate dehydrogenase {ECO:0000256|HAMAP-Rule:MF_01517, ECO:0000256|SAAS:SAAS00060476}; EC=1.1.1.37 {ECO:0000256|HAMAP-Rule:MF_01517, ECO:0000256|SAAS:SAAS00060476};; TaxID=1094180 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Xanthomonas.;" source="Xanthomonas vasicola pv. vasculorum NCPPB 1381.;"
mdh; malate dehydrogenase (EC:1.1.1.37); K00024 malate dehydrogenase [EC:1.1.1.37] rbh
Malate dehydrogenase n=2 Tax=Xanthomonas RepID=V7ZFY2_9XANT rbh
scnpilot_solids1_trim150_scaffold_1403_4
Xanthomonas gardneri, Xanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(3881..4375)
DNA (495bp) protein (165aa)
Peptidyl-prolyl cis-trans isomerase {ECO:0000256|RuleBase:RU000493}; EC=5.2.1.8 {ECO:0000256|RuleBase:RU000493};; TaxID=925777 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Xanthomonas.;" source="Xanthomonas gardneri ATCC 19865.;"
peptidyl-prolyl cis-trans isomerase (EC:5.2.1.8); K03768 peptidyl-prolyl cis-trans isomerase B (cyclophilin B) [EC:5.2.1.8]
peptidylprolyl isomerase n=1 Tax=Xanthomonas sp. M97 RepID=UPI0003A93858 rbh
scnpilot_solids1_trim150_scaffold_1403_5
Stenotrophomonas maltophilia, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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4584..6413
DNA (1830bp) protein (610aa)
Putative translation elongation factor G n=1 Tax=Stenotrophomonas maltophilia RepID=Q8RJW2_STEMA rbh
Putative translation elongation factor G {ECO:0000313|EMBL:CAC93615.1}; TaxID=40324 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas; Stenotrophomonas maltophilia group.;" source="Stenotrophomonas maltophilia (Pseudomonas maltophilia) (Xanthomonas; maltophilia).;"
typA; putative GTP-binding protein; K06207 GTP-binding protein
scnpilot_solids1_trim150_scaffold_1403_6
Stenotrophomonas rhizophila, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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6419..6901
DNA (483bp) protein (161aa)
membrane protein n=1 Tax=Stenotrophomonas maltophilia RepID=UPI0002FD1C4E
Membrane protein {ECO:0000313|EMBL:AHY60131.1}; TaxID=216778 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas.;" source="Stenotrophomonas rhizophila.;"
hypothetical protein
scnpilot_solids1_trim150_scaffold_1403_7
Stenotrophomonas maltophilia, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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6977..8575
DNA (1599bp) protein (533aa)
amidase (EC:3.5.1.4) rbh
Amidase {ECO:0000313|EMBL:AEM50126.1}; EC=3.5.1.4 {ECO:0000313|EMBL:AEM50126.1};; Flags: Precursor;; TaxID=868597 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas; Stenotrophomonas maltophilia group.;" source="Stenotrophomonas maltophilia JV3.;"
Amidase n=1 Tax=Stenotrophomonas maltophilia JV3 RepID=G0JZ73_STEMA rbh
scnpilot_solids1_trim150_scaffold_1403_8
Xanthomonas oryzae, Xanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(9106..10491)
DNA (1386bp) protein (462aa)
3-deoxy-7-phosphoheptulonate synthase; K01626 3-deoxy-7-phosphoheptulonate synthase [EC:2.5.1.54] rbh
3-deoxy-7-phosphoheptulonate synthase n=1 Tax=Xanthomonas oryzae pv. oryzicola BLS256 RepID=G7TF95_9XANT rbh
3-deoxy-7-phosphoheptulonate synthase {ECO:0000313|EMBL:AEQ95263.1}; TaxID=383407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Xanthomonas.;" source="Xanthomonas oryzae pv. oryzicola (strain BLS256).;"
scnpilot_solids1_trim150_scaffold_1403_9
Stenotrophomonas rhizophila, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(10541..11056)
DNA (516bp) protein (172aa)
dsbB; disulfide bond formation protein B (EC:1.8.4.2); K03611 disulfide bond formation protein DsbB
dihydrolipoamide acetyltransferase n=1 Tax=Stenotrophomonas maltophilia RepID=UPI00035ECADC
Disulfide bond formation protein B {ECO:0000256|HAMAP-Rule:MF_00286}; Disulfide oxidoreductase {ECO:0000256|HAMAP-Rule:MF_00286}; TaxID=216778 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas.;" source="Stenotrophomonas rhizophila.;"
scnpilot_solids1_trim150_scaffold_1403_10
Stenotrophomonas maltophilia, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(11351..11737)
DNA (387bp) protein (129aa)
50S ribosomal protein L17 n=1 Tax=Stenotrophomonas maltophilia RepID=UPI0003000815
50S ribosomal protein L17 {ECO:0000256|HAMAP-Rule:MF_01368, ECO:0000256|RuleBase:RU000661}; TaxID=40324 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas; Stenotrophomonas maltophilia group.;" source="Stenotrophomonas maltophilia (Pseudomonas maltophilia) (Xanthomonas; maltophilia).;"
rplQ; 50S ribosomal protein L17; K02879 large subunit ribosomal protein L17
scnpilot_solids1_trim150_scaffold_1403_11
Stenotrophomonas maltophilia, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11930..12928)
DNA (999bp) protein (333aa)
DNA-directed RNA polymerase subunit alpha {ECO:0000256|HAMAP-Rule:MF_00059}; Short=RNAP subunit alpha {ECO:0000256|HAMAP-Rule:MF_00059};; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_00059};; RNA polymerase subunit alpha {ECO:0000256|HAMAP-Rule:MF_00059}; Transcriptase subunit alpha {ECO:0000256|HAMAP-Rule:MF_00059}; TaxID=40324 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas; Stenotrophomonas maltophilia group.;" source="Stenotrophomonas maltophilia (Pse
rpoA; DNA-directed RNA polymerase subunit alpha (EC:2.7.7.6); K03040 DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6] rbh
DNA-directed RNA polymerase subunit alpha n=1 Tax=Xanthomonadaceae RepID=UPI00029B01BE rbh
scnpilot_solids1_trim150_scaffold_1403_12
Stenotrophomonas sp. RIT309, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(12984..13409)
DNA (426bp) protein (142aa)
30S ribosomal protein S4 n=1 Tax=Xanthomonas sp. M97 RepID=UPI0003B6F0F2
30S ribosomal protein S4 {ECO:0000256|HAMAP-Rule:MF_01306}; TaxID=1470590 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas.;" source="Stenotrophomonas sp. RIT309.;"
rpsD; 30S ribosomal protein S4; K02986 small subunit ribosomal protein S4
Displaying 12 items

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