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scnpilot_solids1_trim150_scaffold_133_11

Organism: SCNPILOT_SOLID_1_TRIM150_Stenotrophomonas_70_20

near complete RP 51 / 55 MC: 4 BSCG 50 / 51 MC: 2 ASCG 12 / 38
Location: comp(9177..9887)

Top 3 Functional Annotations

Value Algorithm Source
pseudouridylate synthase; K06182 23S rRNA pseudouridine2604 synthase [EC:5.4.99.21] similarity KEGG
DB: KEGG
  • Identity: 59.7
  • Coverage: 236.0
  • Bit_score: 282
  • Evalue 1.60e-73
Pseudouridylate synthase, 16S rRNA uridine-516 n=1 Tax=Xanthomonas vesicatoria ATCC 35937 RepID=F0B8K4_9XANT similarity UNIREF
DB: UNIREF100
  • Identity: 59.3
  • Coverage: 236.0
  • Bit_score: 283
  • Evalue 1.80e-73
RNA-binding protein S4 {ECO:0000313|EMBL:KGM57777.1}; TaxID=913325 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Lysobacter.;" source="Lysobacter arseniciresistens ZS79.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 61.1
  • Coverage: 234.0
  • Bit_score: 291
  • Evalue 9.20e-76

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Taxonomy

Lysobacter arseniciresistens → Lysobacter → Xanthomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 711
ATGACCACCCCGATCCGCCTCGACAAGCGCCTCGCCGCGCAGCTGAACTGCTCCCGCGCCCAGGCCCGGCACTACATCGAGGGCGGCTGGGTCAGCGTCGACGGGGTGGTGGTGGAAGCACCGCAGGCGATGGTGGCCGGGCAGACCGTCACCCTCGCCGCCGGTGCCGCCAGCGAACCGGCCGAGCCGGCGACGCTGCTGCTGAACAAGCCGGCCGGCTGCAGCGCCGCGGACCTGTCCGCGCTGCTGCGCGAGGAGGCCCGTTTCGCCGACGACGCCTCCGGCATCCGCCTGCTGCACCGCCACTTCCTGCGCCTGGAAACGCCGATGCCGCTGGACGACGACGCCTGCGGACTGGTGGTGCTTACCCAGGACTGGCGCGTGCGCCGCCACCTGCTCGAGACCGGGGCATCGCTGGAACAGGAATACATGGTGGACGTGGACGGCGAAGGCAGCCCCTGGGCGCTGCCGAGGCTGACCCACGGCCTGGAGTACCAGGGGCGCACGCTGCCGCCCTGCAAGGTCAGCTGGCAGAGCGAACAGCGCCTGCGTTTCGCGATCAAGGACGTGCGGCCGGGCCAGCTGCGGCACATGTGCGCCGCGGTCGGGCTGCGCGCCACCCAGGTACGCCGGCTGCGGATCGGCCGCATCGGCCTGAACAGGATGCCGGACGGCCAGTGGCGTTATCTCGCCTCCGCCCAGCGCTTCTGA
PROTEIN sequence
Length: 237
MTTPIRLDKRLAAQLNCSRAQARHYIEGGWVSVDGVVVEAPQAMVAGQTVTLAAGAASEPAEPATLLLNKPAGCSAADLSALLREEARFADDASGIRLLHRHFLRLETPMPLDDDACGLVVLTQDWRVRRHLLETGASLEQEYMVDVDGEGSPWALPRLTHGLEYQGRTLPPCKVSWQSEQRLRFAIKDVRPGQLRHMCAAVGLRATQVRRLRIGRIGLNRMPDGQWRYLASAQRF*