ggKbase home page

scnpilot_solids1_trim150_scaffold_421_18

Organism: SCNPILOT_SOLID_1_TRIM150_Stenotrophomonas_70_20

near complete RP 51 / 55 MC: 4 BSCG 50 / 51 MC: 2 ASCG 12 / 38
Location: 9112..9918

Top 3 Functional Annotations

Value Algorithm Source
Integrase catalytic region n=1 Tax=Pseudoxanthomonas suwonensis (strain 11-1) RepID=E6WSZ2_PSEUU similarity UNIREF
DB: UNIREF100
  • Identity: 94.4
  • Coverage: 268.0
  • Bit_score: 510
  • Evalue 7.80e-142
  • rbh
Transposase {ECO:0000313|EMBL:AJC46520.1}; TaxID=56458 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Xanthomonas.;" source="Xanthomonas sacchari.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 94.8
  • Coverage: 268.0
  • Bit_score: 511
  • Evalue 6.40e-142
integrase catalytic subunit similarity KEGG
DB: KEGG
  • Identity: 94.4
  • Coverage: 268.0
  • Bit_score: 510
  • Evalue 2.40e-142
  • rbh

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Xanthomonas sacchari → Xanthomonas → Xanthomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 807
ATGGAACGCGGATTCACTGAGCGGCAGGCGCTAGCGTTGGTGCGGATGAGCGCCAGCGCACTGCGCTACGTCCCGCGTCCTGACCGCAATAGCGAGCTTCGCGAGCGGATCCTGGCGCTGGCACAGCGGCATAAACGCTACGGCGTCGGGATGATCTATCTGAAGCTGCGGCAGGAGCAGTGGCTGGTGAACTACAAGCGGGTGGAACGGCTGTATCAGCAGGCCAGCTTGCAGGTGCGCCGGCGCAAGCGGAAGAAGGTACTACTGGGCGAGCGCCAGCCGTTGCTTCGGCCGGAAGCCGCCAACCAGGTCTGGTCGATGGACTTTGTGTTCGACCGCACCGCCGAGGGCCGGGTGCTCAAGGCCCTGACCATCGTCGACGATGCCACGCACGAGGCGGTGGCGATCGAGGTGGAGCGGGCCATCTCCGGCCACGGCGTGGCCCGGGTGCTGGATCGGCTGGCGCTGACACGGGGTCTGCCGCAGGTGATCCGCACCGACAACGGCAAGGAGTTCTGCGGCAAGACGATGGTGACGTGGGCCCACCAGCGCGGTGTGCAGTTGCGCTTGATCCAGCCAGGCAAGCCGAACCAGAACGCCTACATCGAGAGCTTCAACGGCCGCCTGCGCGACGAATGCCTCAACGAACACTGGTTCCCGACGCTGCTGCACGCCCGTACCGAGATCGAGACCTGGCGACGGGAATATAACGAGGAGCGGCCGAAGAAGATCCTGGGCGGTCTGACCCCGGCTGCCTATGCACAACAGCTAGCGGCCAAAGCCGCTACGATGAAACCCGGACTCTAA
PROTEIN sequence
Length: 269
MERGFTERQALALVRMSASALRYVPRPDRNSELRERILALAQRHKRYGVGMIYLKLRQEQWLVNYKRVERLYQQASLQVRRRKRKKVLLGERQPLLRPEAANQVWSMDFVFDRTAEGRVLKALTIVDDATHEAVAIEVERAISGHGVARVLDRLALTRGLPQVIRTDNGKEFCGKTMVTWAHQRGVQLRLIQPGKPNQNAYIESFNGRLRDECLNEHWFPTLLHARTEIETWRREYNEERPKKILGGLTPAAYAQQLAAKAATMKPGL*