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scnpilot_solids1_trim150_scaffold_421

Search features with annotation key words

Displaying items 1-30 of 57 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_solids1_trim150_scaffold_421_1
Acidovorax avenae, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(105..662)
DNA (558bp) protein (186aa)
Putative uncharacterized protein n=1 Tax=Acidovorax avenae (strain ATCC 19860 / DSM 7227 / JCM 20985 / NCPPB 1011) RepID=F0QBP4_ACIAP
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADX47403.1}; TaxID=643561 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax avenae (strain ATCC 19860 / DSM 7227 / JCM 20985 / NCPPB; 1011).;"
scnpilot_solids1_trim150_scaffold_421_2
Bradyrhizobium sp. STM 3843, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(659..1294)
DNA (636bp) protein (212aa)
Uncharacterized protein n=1 Tax=Bradyrhizobium sp. STM 3843 RepID=H0TCE1_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:CCE04129.1}; TaxID=551947 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. STM 3843.;"
hypothetical protein
scnpilot_solids1_trim150_scaffold_421_3
Pseudomonas sp. M47T1, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1295..1810)
DNA (516bp) protein (172aa)
Uncharacterized protein n=1 Tax=Pseudomonas sp. M47T1 RepID=I4N3K0_9PSED
Uncharacterized protein {ECO:0000313|EMBL:EIK96040.1}; TaxID=1179778 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas sp. M47T1.;"
hypothetical protein
scnpilot_solids1_trim150_scaffold_421_4
Pseudomonas sp. M47T1, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1821..2051)
DNA (231bp) protein (77aa)
Uncharacterized protein n=1 Tax=Pseudomonas sp. M47T1 RepID=I4N3K1_9PSED
Uncharacterized protein {ECO:0000313|EMBL:EIK96041.1}; TaxID=1179778 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas sp. M47T1.;"
hypothetical protein
scnpilot_solids1_trim150_scaffold_421_5
Stenotrophomonas maltophilia, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2235..2549)
DNA (315bp) protein (105aa)
Uncharacterized protein n=1 Tax=Stenotrophomonas maltophilia JV3 RepID=G0JUR1_STEMA
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEM50812.1}; TaxID=868597 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas; Stenotrophomonas maltophilia group.;" source="Stenotrophomonas maltophilia JV3.;"
scnpilot_solids1_trim150_scaffold_421_6
Xanthomonas axonopodis, Xanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2549..3010)
DNA (462bp) protein (154aa)
Uncharacterized protein n=1 Tax=Stenotrophomonas maltophilia AU12-09 RepID=M5TTD8_STEMA
Uncharacterized protein {ECO:0000313|EMBL:EWC53107.1}; TaxID=1401257 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Xanthomonas.;" source="Xanthomonas axonopodis pv. glycines str. 8ra.;"
hypothetical protein
scnpilot_solids1_trim150_scaffold_421_7
Xylella fastidiosa, Xylella, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3007..3492)
DNA (486bp) protein (162aa)
Lysozyme {ECO:0000256|RuleBase:RU003788}; EC=3.2.1.17 {ECO:0000256|RuleBase:RU003788};; TaxID=155920 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Xylella.;" source="Xylella fastidiosa subsp. sandyi Ann-1.;"
phage-related endolysin; K01185 lysozyme [EC:3.2.1.17]
Lysozyme n=1 Tax=Xylella fastidiosa subsp. sandyi Ann-1 RepID=Q3RAG8_XYLFS
scnpilot_solids1_trim150_scaffold_421_8
unknown

Not on your lists

comp(3485..3739)
DNA (255bp) protein (85aa)

This feature has no annotations

scnpilot_solids1_trim150_scaffold_421_9
unknown

Not on your lists

comp(3837..4826)
DNA (990bp) protein (330aa)

This feature has no annotations

scnpilot_solids1_trim150_scaffold_421_10
unknown

Not on your lists

comp(4936..5295)
DNA (360bp) protein (120aa)

This feature has no annotations

scnpilot_solids1_trim150_scaffold_421_11
Stenotrophomonas maltophilia, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5364..6080)
DNA (717bp) protein (239aa)
Uncharacterized protein n=1 Tax=Stenotrophomonas maltophilia Ab55555 RepID=J7VF20_STEMA rbh
Uncharacterized protein {ECO:0000313|EMBL:EJP76834.1}; TaxID=1183154 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas; Stenotrophomonas maltophilia group.;" source="Stenotrophomonas maltophilia Ab55555.;"
putative DNA-binding protein (Roi)
scnpilot_solids1_trim150_scaffold_421_12
unknown

Not on your lists

comp(6077..6232)
DNA (156bp) protein (52aa)

This feature has no annotations

scnpilot_solids1_trim150_scaffold_421_13
Pseudogulbenkiania sp. NH8B, Pseudogulbenkiania, Neisseriales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6452..6946
DNA (495bp) protein (165aa)
Putative phage repressor, Arc family n=1 Tax=Pseudogulbenkiania sp. (strain NH8B) RepID=G2IX64_PSEUL
putative phage repressor, Arc family
Putative phage repressor, Arc family {ECO:0000313|EMBL:BAK75413.1}; TaxID=748280 species="Bacteria; Proteobacteria; Betaproteobacteria; Neisseriales; Chromobacteriaceae; Pseudogulbenkiania.;" source="Pseudogulbenkiania sp. (strain NH8B).;"
scnpilot_solids1_trim150_scaffold_421_14
Dechloromonas aromatica, Dechloromonas, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6962..7453
DNA (492bp) protein (164aa)
Putative uncharacterized protein n=1 Tax=Dechloromonas aromatica (strain RCB) RepID=Q47HX6_DECAR
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AAZ45555.1}; TaxID=159087 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Dechloromonas.;" source="Dechloromonas aromatica (strain RCB).;"
scnpilot_solids1_trim150_scaffold_421_15
Comamonas testosteroni, Comamonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7495..7977
DNA (483bp) protein (161aa)
Putative uncharacterized protein n=1 Tax=Comamonas testosteroni S44 RepID=D8D382_COMTE
Uncharacterized protein {ECO:0000313|EMBL:EFI62655.1}; TaxID=563045 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Comamonas.;" source="Comamonas testosteroni S44.;"
hypothetical protein
scnpilot_solids1_trim150_scaffold_421_16
unknown

Not on your lists

8228..8518
DNA (291bp) protein (97aa)

This feature has no annotations

scnpilot_solids1_trim150_scaffold_421_17
Xanthomonas sacchari, Xanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8873..9076
DNA (204bp) protein (68aa)
Putative is1404 transposase orf a protein n=1 Tax=Xanthomonas albilineans (strain GPE PC73 / CFBP 7063) RepID=D2UE12_XANAP
Transposase {ECO:0000313|EMBL:AJC47643.1}; TaxID=56458 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Xanthomonas.;" source="Xanthomonas sacchari.;"
is1404 transposase orf a protein; K07497 putative transposase
scnpilot_solids1_trim150_scaffold_421_18
Xanthomonas sacchari, Xanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9112..9918
DNA (807bp) protein (269aa)
Integrase catalytic region n=1 Tax=Pseudoxanthomonas suwonensis (strain 11-1) RepID=E6WSZ2_PSEUU rbh
Transposase {ECO:0000313|EMBL:AJC46520.1}; TaxID=56458 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Xanthomonas.;" source="Xanthomonas sacchari.;"
integrase catalytic subunit rbh
scnpilot_solids1_trim150_scaffold_421_19
Dyella jiangningensis, Dyella, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9991..10296
DNA (306bp) protein (102aa)
Exonuclease n=1 Tax=Laribacter hongkongensis (strain HLHK9) RepID=C1D7P6_LARHH
Exonuclease {ECO:0000313|EMBL:AHX12911.1}; TaxID=1379159 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Dyella.;" source="Dyella jiangningensis.;"
exonuclease
scnpilot_solids1_trim150_scaffold_421_20
Stenotrophomonas maltophilia, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10296..10523
DNA (228bp) protein (76aa)
Uncharacterized protein n=1 Tax=Stenotrophomonas maltophilia JV3 RepID=G0K5L8_STEMA
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEM50760.1}; TaxID=868597 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas; Stenotrophomonas maltophilia group.;" source="Stenotrophomonas maltophilia JV3.;"
scnpilot_solids1_trim150_scaffold_421_21
Xanthomonas sp. Nyagatare, Xanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10520..10777
DNA (258bp) protein (86aa)
hypothetical protein n=1 Tax=Xanthomonas axonopodis RepID=UPI000318DFF1
Uncharacterized protein {ECO:0000313|EMBL:KGK59606.1}; TaxID=1552758 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Xanthomonas.;" source="Xanthomonas sp. Nyagatare.;"
scnpilot_solids1_trim150_scaffold_421_22
unknown

Not on your lists

10774..11487
DNA (714bp) protein (238aa)

This feature has no annotations

scnpilot_solids1_trim150_scaffold_421_23
Thiomonas arsenitoxydans, Thiomonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11474..12382
DNA (909bp) protein (303aa)
putative C-5 cytosine-specific DNA methylase (EC:2.1.1.37)
Putative C-5 cytosine-specific DNA methylase {ECO:0000313|EMBL:CAZ90422.1}; EC=2.1.1.37 {ECO:0000313|EMBL:CAZ90422.1};; TaxID=426114 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Thiomonas.;" source="Thiomonas arsenitoxydans (strain DSM 22701 / CIP 110005 / 3As).;"
Putative C-5 cytosine-specific DNA methylase n=1 Tax=Thiomonas arsenitoxydans (strain DSM 22701 / CIP 110005 / 3As) RepID=D6CVT3_THIA3
scnpilot_solids1_trim150_scaffold_421_24
Xanthomonas axonopodis, Xanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12416..12649
DNA (234bp) protein (78aa)
Uncharacterized protein {ECO:0000313|EMBL:EWC53149.1}; TaxID=1401257 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Xanthomonas.;" source="Xanthomonas axonopodis pv. glycines str. 8ra.;"
scnpilot_solids1_trim150_scaffold_421_trna_1
unknown

Not on your lists

comp(12689..12778)
DNA (90bp)
transferRNA Ser
scnpilot_solids1_trim150_scaffold_421_25
Stenotrophomonas rhizophila, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12854..13057)
DNA (204bp) protein (68aa)
carbon storage regulator n=1 Tax=Stenotrophomonas maltophilia RepID=UPI0002EBEB5D
Carbon storage regulator homolog {ECO:0000256|HAMAP-Rule:MF_00167, ECO:0000256|SAAS:SAAS00093889}; TaxID=216778 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas.;" source="Stenotrophomonas rhizophila.;"
carbon starvation protein CstA; K03563 carbon storage regulator
scnpilot_solids1_trim150_scaffold_421_26
Stenotrophomonas maltophilia, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(13197..15848)
DNA (2652bp) protein (884aa)
Alanine--tRNA ligase {ECO:0000255|HAMAP-Rule:MF_00036}; EC=6.1.1.7 {ECO:0000255|HAMAP-Rule:MF_00036};; Alanyl-tRNA synthetase {ECO:0000255|HAMAP-Rule:MF_00036}; Short=AlaRS {ECO:0000255|HAMAP-Rule:MF_00036};; TaxID=522373 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas; Stenotrophomonas maltophilia group.;" source="Stenotrophomonas maltophilia (strain K279a).;"
alaS; alanyl-tRNA synthetase (EC:6.1.1.7); K01872 alanyl-tRNA synthetase [EC:6.1.1.7] rbh
alanyl-tRNA synthetase n=1 Tax=Stenotrophomonas maltophilia RepID=UPI00037685DD rbh
scnpilot_solids1_trim150_scaffold_421_27
Stenotrophomonas maltophilia, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15947..16438)
DNA (492bp) protein (164aa)
Regulatory protein RecX n=1 Tax=Stenotrophomonas maltophilia RA8 RepID=M5CXK7_STEMA
Regulatory protein RecX {ECO:0000256|HAMAP-Rule:MF_01114, ECO:0000256|SAAS:SAAS00093789}; TaxID=1118157 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas; Stenotrophomonas maltophilia group.;" source="Stenotrophomonas maltophilia RA8.;"
recX; recombination regulator RecX; K03565 regulatory protein
scnpilot_solids1_trim150_scaffold_421_28
Stenotrophomonas maltophilia, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(16544..17578)
DNA (1035bp) protein (345aa)
Protein RecA n=35 Tax=Stenotrophomonas RepID=RECA_STRMK rbh
recA; recombinase A; K03553 recombination protein RecA rbh
Protein RecA {ECO:0000256|HAMAP-Rule:MF_00268, ECO:0000256|RuleBase:RU000526}; Recombinase A {ECO:0000256|HAMAP-Rule:MF_00268, ECO:0000256|RuleBase:RU000526}; TaxID=1183154 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas; Stenotrophomonas maltophilia group.;" source="Stenotrophomonas maltophilia Ab55555.;"
scnpilot_solids1_trim150_scaffold_421_29
Stenotrophomonas maltophilia, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17762..18409)
DNA (648bp) protein (216aa)
LexA repressor {ECO:0000256|HAMAP-Rule:MF_00015, ECO:0000256|SAAS:SAAS00008101}; EC=3.4.21.88 {ECO:0000256|HAMAP-Rule:MF_00015, ECO:0000256|SAAS:SAAS00008054};; TaxID=40324 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas; Stenotrophomonas maltophilia group.;" source="Stenotrophomonas maltophilia (Pseudomonas maltophilia) (Xanthomonas; maltophilia).;"
lexA2; LexA repressor (EC:3.4.21.88); K01356 repressor LexA [EC:3.4.21.88] rbh
LexA family transcriptional regulator n=1 Tax=Stenotrophomonas maltophilia RepID=UPI0002EDC2A4 rbh
Displaying items 1-30 of 57 in total

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