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scnpilot_solids1_trim150_scaffold_294_2

Organism: SCNPILOT_SOLID_1_TRIM150_Stenotrophomonas_70_20

near complete RP 51 / 55 MC: 4 BSCG 50 / 51 MC: 2 ASCG 12 / 38
Location: comp(656..1072)

Top 3 Functional Annotations

Value Algorithm Source
Ribosomal silencing factor RsfS n=1 Tax=Xanthomonas gardneri ATCC 19865 RepID=F0C421_9XANT similarity UNIREF
DB: UNIREF100
  • Identity: 81.6
  • Coverage: 136.0
  • Bit_score: 227
  • Evalue 8.90e-57
Ribosomal silencing factor RsfS {ECO:0000256|HAMAP-Rule:MF_01477}; TaxID=69929 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Xanthomonas.;" source="Xanthomonas arboricola pv. pruni.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 82.4
  • Coverage: 136.0
  • Bit_score: 228
  • Evalue 4.30e-57
iojap family protein; K09710 ribosome-associated protein similarity KEGG
DB: KEGG
  • Identity: 85.0
  • Coverage: 133.0
  • Bit_score: 225
  • Evalue 1.40e-56

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Taxonomy

Xanthomonas arboricola → Xanthomonas → Xanthomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 417
TTGACCACCGAAGCCCAAGTCATCAAGACCCAGTTGCCCAATCCGCCGCCGTCCGTTCCCGCCCTGCTGGCCTCCGTGCATGCGGCGCTGGAAGAACTCAAGGCCAAGGACGCCGTGGAGATCGACGTCCGTGGCAAGTCCAGCGTGGCGGATTACCTGGTCATCGCTTCGGGCACCTCGACGCGCCACGTCAAGTCGATCGGCGACGAAGTGGTGCGGTTCGCCAAGGACCTGGGGGTGATGCCGCTGGGCGTGGAAGGCGAGCGCGAGGCCGAATGGGTGCTGGTGGACCTGGGCGACGTGATCGTGCACGTGATGCTGCCGCGCGTGCGCGAGTTCTACGCGCTCGAGCGCCTGTGGACGGTGGGCGACCAGCCGCCATCGTCCGCCGACGGGGAGCAGCAGGAAGCCGGCTGA
PROTEIN sequence
Length: 139
LTTEAQVIKTQLPNPPPSVPALLASVHAALEELKAKDAVEIDVRGKSSVADYLVIASGTSTRHVKSIGDEVVRFAKDLGVMPLGVEGEREAEWVLVDLGDVIVHVMLPRVREFYALERLWTVGDQPPSSADGEQQEAG*