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scnpilot_solids1_trim150_scaffold_178_18

Organism: SCNPILOT_SOLID_1_TRIM150_Stenotrophomonas_70_20

near complete RP 51 / 55 MC: 4 BSCG 50 / 51 MC: 2 ASCG 12 / 38
Location: 17084..17623

Top 3 Functional Annotations

Value Algorithm Source
Uncharacterized protein n=1 Tax=Xanthomonas hortorum pv. carotae str. M081 RepID=V7ZAS7_9XANT similarity UNIREF
DB: UNIREF100
  • Identity: 66.9
  • Coverage: 175.0
  • Bit_score: 233
  • Evalue 1.20e-58
Lipopolysaccharide export system protein LptA {ECO:0000256|HAMAP-Rule:MF_01914}; Flags: Precursor;; TaxID=454957 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Xanthomonas.;" source="Xanthomonas arboricola pv. celebensis.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 67.0
  • Coverage: 176.0
  • Bit_score: 235
  • Evalue 5.90e-59
hypothetical protein; K09774 lipopolysaccharide export system protein LptA similarity KEGG
DB: KEGG
  • Identity: 65.1
  • Coverage: 175.0
  • Bit_score: 231
  • Evalue 1.90e-58

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Taxonomy

Xanthomonas arboricola → Xanthomonas → Xanthomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 540
ATGAACCCAATGCTGCCCGCCAGGCTCGCTAAGCTCGCGCCGACCGTCCTGCTCGCCGCCGCGCTCGTTCCCGGCGTGGCCGCGGCCAGGGAATCGGACCGCAACCAGCCCATGGACATCGTCGCCGACCACAGCGAGGGCAACCTGGCCGGCGGCAACGGCAAGTACCGCTTCAGCGGCAACGTGGTCATCGTCCAGGGCACGCTGGAGATCCACGCCGACGCCGCCGACGTGATCCAGAAGAACGGCGAGACCGAACGCGTCGTGCTCACCGGCAAGCAGGCCACGCTCAAGCAGCAGATGGACGACGGCACCTGGATGAACGCCCGCGCCGACAACATGGACTACAACGTCAACAGCGAGGTGATCGTGCTGACCGGCAACTACAAGGTCGACTCCGAGCGCGGCTCCAACGCCGGCCAGCGCATGGTCTACAACACCCGCAGCGGCGACATGCAGAGCGGTGGCGACGGCACCCGCGTGCGCACCGTGATCCAGCCCAGGAACAAGGCGCCGGCCGCGGCGGGAGAGAAGAAGTAA
PROTEIN sequence
Length: 180
MNPMLPARLAKLAPTVLLAAALVPGVAAARESDRNQPMDIVADHSEGNLAGGNGKYRFSGNVVIVQGTLEIHADAADVIQKNGETERVVLTGKQATLKQQMDDGTWMNARADNMDYNVNSEVIVLTGNYKVDSERGSNAGQRMVYNTRSGDMQSGGDGTRVRTVIQPRNKAPAAAGEKK*