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scnpilot_solids1_trim150_scaffold_178_19

Organism: SCNPILOT_SOLID_1_TRIM150_Stenotrophomonas_70_20

near complete RP 51 / 55 MC: 4 BSCG 50 / 51 MC: 2 ASCG 12 / 38
Location: 17623..18342

Top 3 Functional Annotations

Value Algorithm Source
ABC transporter ATP-binding protein; K06861 lipopolysaccharide export system ATP-binding protein [EC:3.6.3.-] similarity KEGG
DB: KEGG
  • Identity: 89.1
  • Coverage: 239.0
  • Bit_score: 420
  • Evalue 3.00e-115
  • rbh
lipopolysaccharide ABC transporter ATP-binding protein n=1 Tax=Stenotrophomonas maltophilia RepID=UPI0002D282F5 similarity UNIREF
DB: UNIREF100
  • Identity: 89.5
  • Coverage: 239.0
  • Bit_score: 430
  • Evalue 1.60e-117
  • rbh
Sugar ABC transporter ATP-binding protein {ECO:0000313|EMBL:AJC47957.1}; TaxID=56458 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Xanthomonas.;" source="Xanthomonas sacchari.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 90.0
  • Coverage: 239.0
  • Bit_score: 423
  • Evalue 2.00e-115

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Taxonomy

Xanthomonas sacchari → Xanthomonas → Xanthomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 720
ATGCTCGTCGCCGAAGGCCTGCGCAAGCGCTACAAGAACCGTGAGGTCGTGCGCGAGTTCGGCCTGTCGCTGGATGCCGGCGAGGTGGTCGGCCTGCTCGGCCCCAACGGTGCCGGCAAGACCACCTGCTTCTACATGATCGTGGGGCTGGTCGAGAGCGACGCCGGCCGCATCGTGCTGGACGGCCGCGACATCACCGGCGAGCCGATGTACGCCCGCGCCAAGCTGGGGGTCGGCTACCTGCCGCAGGAGCCGTCGGTGTTCCGCAAGCTCAGCGTGGCCGACAACATCCGCCTGGTGCTGGAGCTGCGCGAGGACCTGGACGCCGATGGCCGCGAACGCGAACTGTCGGCCTTGCTCGACGAGCTGCAGATCAGCCATGTCGCCGACCAGGCCGGCGCCAGCCTGTCCGGCGGCGAGCGCCGCCGCTGCGAGATCGCCCGCGCGCTGGCCGCCAAGCCGCGCCTGATCCTGCTCGACGAACCCTTCGCCGGCGTCGACCCGATCTCGGTCGGCGAGATCCAGCGCATCGTCACCCATCTCAAGCAGCGCGGCATCGGCGTACTGATCACCGACCACAACGTCCGCGAGACCTTGGGAATCTGCGACCGCGCGTATATCCTCAACGAGGGCAGCGTGCTGGCGCAGGGGGCGCCGGACGAACTGCTGTCCAACACCGACGTCCGCCGCGTCTACCTTGGAGACAGCTTCACGCTCTGA
PROTEIN sequence
Length: 240
MLVAEGLRKRYKNREVVREFGLSLDAGEVVGLLGPNGAGKTTCFYMIVGLVESDAGRIVLDGRDITGEPMYARAKLGVGYLPQEPSVFRKLSVADNIRLVLELREDLDADGRERELSALLDELQISHVADQAGASLSGGERRRCEIARALAAKPRLILLDEPFAGVDPISVGEIQRIVTHLKQRGIGVLITDHNVRETLGICDRAYILNEGSVLAQGAPDELLSNTDVRRVYLGDSFTL*