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scnpilot_solids1_trim150_scaffold_63_10

Organism: SCNPILOT_SOLID_1_TRIM150_Stenotrophomonas_70_20

near complete RP 51 / 55 MC: 4 BSCG 50 / 51 MC: 2 ASCG 12 / 38
Location: comp(12040..13188)

Top 3 Functional Annotations

Value Algorithm Source
Pseudouridine synthase {ECO:0000256|RuleBase:RU362028}; EC=5.4.99.- {ECO:0000256|RuleBase:RU362028};; TaxID=1333853 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas; Stenotrophomonas maltophilia group.;" source="Stenotrophomonas maltophilia MF89.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 84.6
  • Coverage: 382.0
  • Bit_score: 635
  • Evalue 4.20e-179
RluA family pseudouridine synthase; K06179 23S rRNA pseudouridine955/2504/2580 synthase [EC:5.4.99.24] similarity KEGG
DB: KEGG
  • Identity: 84.0
  • Coverage: 382.0
  • Bit_score: 632
  • Evalue 7.90e-179
  • rbh
Pseudouridine synthase n=1 Tax=Stenotrophomonas maltophilia MF89 RepID=T5KSR2_STEMA similarity UNIREF
DB: UNIREF100
  • Identity: 84.6
  • Coverage: 382.0
  • Bit_score: 635
  • Evalue 3.00e-179
  • rbh

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Taxonomy

Stenotrophomonas maltophilia → Stenotrophomonas → Xanthomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1149
ATGGCCGGGAGCGCCGACGAGCCGCTAACATGGCCGCCCCGGGGGCGGTGGCCGCGCACTGTGCCGGATCCGTCGGAAGCCGGGCTTCTGGCCCTGATCAACTTCCAACGAAATCAAACCCTTATATCGCTCCCCGAGTGTAACAGAATAAACAGGCAGATGACTGACTCCGAAGACCGCCGCATACCGCCTGCGGGCAAATCCAGCGTGCGCCTGATCAAGGTTCCGGAAGACCGGGCCGGGCAGCGGCTGGACAACTTCCTGCTCGGCCAGCTCAAGGGCGCCCCGCGCAGCCTGGTCTACAAACTGGTGCGCAGCGGCCAGGTGCGGGTCAATGGCGGCCGAGCCAAGGCCGAGCGCAAGCTGGAGGCGGGCGAGGAGGTGCGCGTGCCGCCGGTCAATCTCGCCGAGGTCGGAGACAAGGCGCCACCGCCGGCCGGCTTCCTGCAGCGCATGGAGCAGGCCATCGTGTTCGAGGACGCGCGGCTGCTGGTCATCAACAAGCCTTCCGGGGTGGCCAGCCATGGCGGCAGCGGCATCAGCCATGGCGCGATCGAAACCATGCGCGCCCTGCGTCCGAACCAGGGGCTGGAGCTGGTCCACCGCCTGGATCGCGACACCTCGGGGCTGCTGGTCATGGCCAAGAAGCGCTCGGCGCTGTCCGAGCTGCAGGCGCTGCTGCGCGAGGACCACGACGGCACCGGGCCCGGCGGCATCCGCAAGCGCTACCTGACCCTGCTGGTCGGGCGCATGCCCGATGGGGTGATGAGCGTGGATGCGCCGCTGCACGTGGGCCTGCGCCAGGGGGGCGAACGCCATGTGCAGGTGAATGCGGCCGGCAAGCCGTCACTGAGCCATTTCAGGGTGCTGGAGCGGCGCGGCGGTCATTCGTACTGCGAGGTGAAGATCGATACCGGGCGTACCCACCAGATCCGCGTGCATGCCCAGCACATCGGTCATCCGGTCGCCGGTGACGACAAGTACGGCGATCCTGCGGTCAACAAGCGGTTTCGCGAGCAGATCGGGCTGAAGCGGCTGTTCCTTCACGCCGCCTCGCTGGAGTTTGCGCTCGATGGCGGCAAGGTGCCCTATGTGCTCAACGCACCGCTGGCGCCGGAACTGGCCGAGGCGCTGGACCGGTTGCGCTGA
PROTEIN sequence
Length: 383
MAGSADEPLTWPPRGRWPRTVPDPSEAGLLALINFQRNQTLISLPECNRINRQMTDSEDRRIPPAGKSSVRLIKVPEDRAGQRLDNFLLGQLKGAPRSLVYKLVRSGQVRVNGGRAKAERKLEAGEEVRVPPVNLAEVGDKAPPPAGFLQRMEQAIVFEDARLLVINKPSGVASHGGSGISHGAIETMRALRPNQGLELVHRLDRDTSGLLVMAKKRSALSELQALLREDHDGTGPGGIRKRYLTLLVGRMPDGVMSVDAPLHVGLRQGGERHVQVNAAGKPSLSHFRVLERRGGHSYCEVKIDTGRTHQIRVHAQHIGHPVAGDDKYGDPAVNKRFREQIGLKRLFLHAASLEFALDGGKVPYVLNAPLAPELAEALDRLR*