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scnpilot_solids1_trim150_scaffold_63_11

Organism: SCNPILOT_SOLID_1_TRIM150_Stenotrophomonas_70_20

near complete RP 51 / 55 MC: 4 BSCG 50 / 51 MC: 2 ASCG 12 / 38
Location: 13401..16595

Top 3 Functional Annotations

Value Algorithm Source
Ribonuclease E {ECO:0000256|HAMAP-Rule:MF_00970}; Short=RNase E {ECO:0000256|HAMAP-Rule:MF_00970};; EC=3.1.26.12 {ECO:0000256|HAMAP-Rule:MF_00970};; TaxID=216778 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas.;" source="Stenotrophomonas rhizophila.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 68.9
  • Coverage: 999.99
  • Bit_score: 1311
  • Evalue 0.0
ribonuclease, Rne/Rng family; K08300 ribonuclease E [EC:3.1.26.12] similarity KEGG
DB: KEGG
  • Identity: 68.4
  • Coverage: 999.99
  • Bit_score: 1291
  • Evalue 0.0
  • rbh
ribonuclease E n=1 Tax=Stenotrophomonas maltophilia RepID=UPI000360392D similarity UNIREF
DB: UNIREF100
  • Identity: 69.2
  • Coverage: 999.99
  • Bit_score: 1327
  • Evalue 0.0
  • rbh

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Taxonomy

Stenotrophomonas rhizophila → Stenotrophomonas → Xanthomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 3195
ATGGCGTTCCGCGCGGTAGCAGCGCGCGAGGAACGCACAATGAAGCGAATGCTGATCAATGCCACGCAGGCCGAAGAGCTGCGCGTGGCCATCGTGGACGGCCAGACCCTGTACGACATCGACATCGAACAGCCGTCCAAGGAACAGAAGAAGTCCAACATCTACAAGGGCCGCATCACCCGGCTCGAACCCTCCCTCGAAGCGGCTTTCGTCGAATACGGCGGTGACAAGCATGGCTTCCTGCCGCTGAAGGAAATCTCCCGCGATTACTTCCAGGCCGGTGTCGACCACAACAAGGCCGGCATCCGCGAGCTGTTGCGCGAGGGCCAGGAAGTCGTGGTCCAGGTCGACAAGGAGGAGCGCGGCAACAAGGGCGCCGCCCTGACCACGTTCATCTCCCTGGCCGGCCGCTACATGGTGCTGATGCCGAACTCGCCGTCGGCCGGCGGCGTCTCGCGCCGCATCGAGGGCGAGGATCGCGCCGCGCTCAAGGACGCGCTCGACAAGCTGAACATCCCCGACGACATGGGCGTGATCATCCGCACCGCCGGCGTCGGCCGCGATGCCGAGGAACTGCAGTGGGACCTGGACTACCTGCTGCAGGTCTGGCGCTCCATCGCCGAGGCCGCGCTGGCCAAGCCCGCGCCGTTCCTTATCTACCAGGAGTCGCGCCTGATCGTGCGCGCCCTGCGCGACTACCTGCGCGCCGACATCGGCGAGATCCTGGTGGACACCGAGGAGCTGTACGAGACCGCGCGCGAGTTCATGCAGCAGGTGATGCCGCAGACCCTGCGCAAGCTCAAGCACTACAAGGACGACATCCCGCTGTTCAACCGCTTCCAGATCGAATCGCAGATCGAGGCGATCTACGAGCGCAACGTGCGCCTGCCGTCCGGCGGCTCGATCGTGGTCGACCAGACCGAAGCGCTGACCGCCATCGACGTGAACTCGGCCCGCGCCACCAAGGGCAGCGACATCGAGGACACCGCGTTCCAGACCAACCTGGAAGCCGCCGAGGAAGTGGCCCGCCAGCTGCGCCTGCGCGACCTGGGTGGCCTGGTGGTGATCGACTTCATCGACATGTCCTCGAACAAGCACCAGCGCGAAGTCGAGAACCGCCTGCAGAACGCGCTCAAGTACGACCGCGCGCGCGTGCAGCTGGGCCGCATCTCGCGCTTCGGGCTGATGGAAATGAGCCGCCAGCGGCTGCGCCCGAGCCTGGGCGAGTCCAGCCAGATCGTGTGCCCACGCTGCGACGGCCAGGGCCGCATGCGCAGCGTCGAGTCGCTGTCGCTGTCGATCATCCGCGTCGCCGAAGAGCATGCGATGAAGGAAAACACCGGGCAGGTGCTGGTCCAGGCCCCGGTCGAGATCGCCAACTTCCTGCTCAACGAGAAGCGTAGCGCGCTGCGCGAGATCGAGCGCCGCCACGACGCGCCGATCATCATCGTCGCCGACGAGCAGCTGCACACCCCGCATTACGAAGTCACCCGCCTGCGCGAGAACGAGCTGGGCGAGGAGTCGGGCAGGCCGAGCTACCAGCGCGGCACCCCGCGCAAGCTGCCGGTGCACGCCCTGACCAAGGCGCAGCTGAACATCCCGCCGGCCCCGGCGGTGACCCACGTCAAGCACAGCCAGCCGGCCCCGGTACGCGAGGTCCCGGAACCGGCGCCGGTACCGGCCCCGGTCGCCGCACCCGCGCCCGCCGCGCCGGCGAGCGGCGGTGTGATGGGATGGCTCAAGCGGGTCTTCGGTGGCGAGACCGCCCCGGCGGCACCGGCCCAGCCGCAGCCGCGCCAGGACAGCGGCCGCGGCAACCGCAACGACCGCAACGACCGCAACAATCCGCGCCGCGACGGCCGTAATGGCAACAATGGCGCCAACGGCCAGCCGGCACGCAACGGCGGCAATGGCAACGGCAACCGTCGCGACGAGCAGCGCCGCGACGAGCGTCGCGATGACCGTCGCCAGGGCGCCGGCGGCAACCCGCAGCAGCAGAATGCCGGCCAGCAGCAGCCCAAGCAGCGCGGCGAACAGCAGGCCCCGCAGGGCAAGCAGCAGCGCAACAACGAACAGCAGCAGCCCAAGCCGCAGAAGCAGCCCAAGCAGCCCAAGCCGCAGCAGGACGCGGACAAGGCCGTGCAGCCGGCCAGCGAAAAGCCGGCACGGCAGCCGCAGGCCGAGGCCCCGCGCCCGGTCGTGGCAGCCGCCCCGGCCATGGCCGCGGCAACCGTGGTCGCCACCGTGGATACGGACGCCACCGAGTCCCCGGCCAAGGTGCAGCTGCCGGTCGTGGAGGACACCGCAGCGGTGACCACCGCCGCCGAGCAGGCCATTGTTGCGACCGATGAGACCACCGCTCCGGCCACCGACGATGGCACTGGCGACGGCGCCAGCCGCCGCCGCCGTGGTCGCCGTGGCGGCCGCCGCCGTCGCCGCGGCAATGCCGAAGGCACCGGCAACGCCGATACCGACGTGCTGGGCAACGATGACGACATCGCCGACGAGGGCGAGGACGCCGGCAGCGAGTCCACCGGAACGGACGCCGTACCGGCAGCGGCCCAGCCGGAGTTCGATTTCGACGACGAGCCGGCGATCGCCCATGCGCCCGCACGTGCACCGCGCCCTGCGCGCGCCGAAGCGCCGGTCGCGCCGCAGGCCGAGCCCGCTGCAACGCCCGCCGCCGCGATCGCGGCGGTGAGCATCGCCGCCGAACCGGAAACCACGGCCATCGCGCAGCCGGAACCCGTGCTGGAGACCGTGGTGGCAACGGCGGAAGCCGCGCCCGTCGTCGTACCGGCAGTGGAAGCCGCACCGGTGGCGGAAGAAGCCGTGCAGCCGGTGGCTGCAGCCGTGCAGCAGGATGCCCCGGAGCCGGCGGTCGTCGCCGAGCCTGCGGCGCCGGTCGAGGCAGTGGTGGTGGCCGTCGAACCGGTTGCGGTTGCGGTAGAGCCGATGCCGGTCCCGGCTGCCACGCCGGAACCGGCCCTGCCGGAGAACGGACAGCTGTTCGCCGAGGCACCGGTGACGGCGCCGGCAACCGGCGAGCAGCACACGTCCAGCGACCAGGCGCCGCTGGCCACGGATGTGGAATCCGAAGCCGCTGCGATCGCCACCGCCGAAGTCGAGGCAGAGGCAGAGGCACAGGCCGGCGTCAGCGCAGCGAACCCGGACGAGCCGCACCGCAACGCCTGA
PROTEIN sequence
Length: 1065
MAFRAVAAREERTMKRMLINATQAEELRVAIVDGQTLYDIDIEQPSKEQKKSNIYKGRITRLEPSLEAAFVEYGGDKHGFLPLKEISRDYFQAGVDHNKAGIRELLREGQEVVVQVDKEERGNKGAALTTFISLAGRYMVLMPNSPSAGGVSRRIEGEDRAALKDALDKLNIPDDMGVIIRTAGVGRDAEELQWDLDYLLQVWRSIAEAALAKPAPFLIYQESRLIVRALRDYLRADIGEILVDTEELYETAREFMQQVMPQTLRKLKHYKDDIPLFNRFQIESQIEAIYERNVRLPSGGSIVVDQTEALTAIDVNSARATKGSDIEDTAFQTNLEAAEEVARQLRLRDLGGLVVIDFIDMSSNKHQREVENRLQNALKYDRARVQLGRISRFGLMEMSRQRLRPSLGESSQIVCPRCDGQGRMRSVESLSLSIIRVAEEHAMKENTGQVLVQAPVEIANFLLNEKRSALREIERRHDAPIIIVADEQLHTPHYEVTRLRENELGEESGRPSYQRGTPRKLPVHALTKAQLNIPPAPAVTHVKHSQPAPVREVPEPAPVPAPVAAPAPAAPASGGVMGWLKRVFGGETAPAAPAQPQPRQDSGRGNRNDRNDRNNPRRDGRNGNNGANGQPARNGGNGNGNRRDEQRRDERRDDRRQGAGGNPQQQNAGQQQPKQRGEQQAPQGKQQRNNEQQQPKPQKQPKQPKPQQDADKAVQPASEKPARQPQAEAPRPVVAAAPAMAAATVVATVDTDATESPAKVQLPVVEDTAAVTTAAEQAIVATDETTAPATDDGTGDGASRRRRGRRGGRRRRRGNAEGTGNADTDVLGNDDDIADEGEDAGSESTGTDAVPAAAQPEFDFDDEPAIAHAPARAPRPARAEAPVAPQAEPAATPAAAIAAVSIAAEPETTAIAQPEPVLETVVATAEAAPVVVPAVEAAPVAEEAVQPVAAAVQQDAPEPAVVAEPAAPVEAVVVAVEPVAVAVEPMPVPAATPEPALPENGQLFAEAPVTAPATGEQHTSSDQAPLATDVESEAAAIATAEVEAEAEAQAGVSAANPDEPHRNA*