ggKbase home page

scnpilot_solids1_trim150_scaffold_683_7

Organism: SCNPILOT_SOLID_1_TRIM150_Stenotrophomonas_70_20

near complete RP 51 / 55 MC: 4 BSCG 50 / 51 MC: 2 ASCG 12 / 38
Location: comp(5668..6087)

Top 3 Functional Annotations

Value Algorithm Source
DNA-binding protein n=1 Tax=Stenotrophomonas maltophilia RepID=UPI000374E5AF similarity UNIREF
DB: UNIREF100
  • Identity: 53.3
  • Coverage: 137.0
  • Bit_score: 145
  • Evalue 3.40e-32
DNA-binding protein HNS {ECO:0000313|EMBL:EZP44500.1}; TaxID=1470590 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas.;" source="Stenotrophomonas sp. RIT309.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 55.7
  • Coverage: 140.0
  • Bit_score: 148
  • Evalue 5.70e-33
hns1; putative DNA-binding protein HNS; K03746 DNA-binding protein H-NS similarity KEGG
DB: KEGG
  • Identity: 51.1
  • Coverage: 137.0
  • Bit_score: 142
  • Evalue 1.20e-31

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Stenotrophomonas sp. RIT309 → Stenotrophomonas → Xanthomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 420
ATGCCCATCGACCTGACCCCACTGAGCGTCCGCGAACTGGACGCGCTGATCCGTGACGCCCGCGCGCGGCACACGACCCTCACCGAGCGCCCGCCCGCGGCCCAGGTCAGGCGCCTGCTGGCGGCCCAGGCACGCGCTGCCGGGTACGCGATCGAGGAGATCTTCGGGACCGACGCCGCCACGGCGCCCCCGGAACCCAAGGCCCGCGCCCGGCGCAAGCGCGGCAAGGTCGAGCCGAAGTACCGTGACCCCGACAATCGCCGCAACACCTGGACCGGCCGCGGCCGGATGCCACGCTGGCTTGCGGCGAAGACGAAGCACGGCCGCAGCGTGGCCGACTTCCTGATCCCGGGCGTGGCCAGGCTCACCCCGAAGGCGCAGGCGGCCACCGGCCGGCGCCGGCTGGTCAAGCACAGCTGA
PROTEIN sequence
Length: 140
MPIDLTPLSVRELDALIRDARARHTTLTERPPAAQVRRLLAAQARAAGYAIEEIFGTDAATAPPEPKARARRKRGKVEPKYRDPDNRRNTWTGRGRMPRWLAAKTKHGRSVADFLIPGVARLTPKAQAATGRRRLVKHS*