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scnpilot_solids1_trim150_scaffold_683

Search features with annotation key words

Displaying 26 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_solids1_trim150_scaffold_683_1
BJP_08E140C01_10KDA_Chromatiales_49_130, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1..249
DNA (249bp) protein (83aa)
Carboxymuconolactone decarboxylase n=1 Tax=Rhodomicrobium vannielii (strain ATCC 17100 / ATH 3.1.1 / DSM 162 / LMG 4299) RepID=E3I1L4_RHOVT
carboxymuconolactone decarboxylase
Tax=BJP_08E140C01_10KDA_Chromatiales_49_130
scnpilot_solids1_trim150_scaffold_683_2
RBG_16_RIF_OP11_02_41_13_curated, RIF-OP11-2, Microgenomates, Bacteria

Not on your lists

221..391
DNA (171bp) protein (57aa)
Uncharacterized protein n=1 Tax=Leptonema illini DSM 21528 RepID=H2CL85_9LEPT
hypothetical protein
Tax=RBG_16_RIF_OP11_02_41_13_curated
scnpilot_solids1_trim150_scaffold_683_3
Stenotrophomonas maltophilia, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

531..2210
DNA (1680bp) protein (560aa)
putative electron transfer flavoprotein-ubiquinone oxidoreductase (EC:1.5.5.1); K00311 electron-transferring-flavoprotein dehydrogenase [EC:1.5.5.1] rbh
dehydrogenase n=1 Tax=Stenotrophomonas maltophilia RepID=UPI00036C4F4D rbh
Uncharacterized protein {ECO:0000313|EMBL:EJP78556.1}; TaxID=1183154 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas; Stenotrophomonas maltophilia group.;" source="Stenotrophomonas maltophilia Ab55555.;"
scnpilot_solids1_trim150_scaffold_683_4
Stenotrophomonas rhizophila, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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2246..2650
DNA (405bp) protein (135aa)
cytochrome C n=1 Tax=Stenotrophomonas maltophilia RepID=UPI0003199190
Cytochrome C {ECO:0000313|EMBL:AHY60785.1}; TaxID=216778 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas.;" source="Stenotrophomonas rhizophila.;"
cytochrome c class I; K08738 cytochrome c
scnpilot_solids1_trim150_scaffold_683_5
Xanthomonas sp. Nyagatare, Xanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2701..4641)
DNA (1941bp) protein (647aa)
Prolyl oligopeptidase family protein n=1 Tax=Xanthomonas hortorum pv. carotae str. M081 RepID=V7Z8Y1_9XANT rbh
Peptidase S9 {ECO:0000313|EMBL:KGK56589.1}; TaxID=1552758 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Xanthomonas.;" source="Xanthomonas sp. Nyagatare.;"
prolyl oligopeptidase family protein rbh
scnpilot_solids1_trim150_scaffold_683_6
Stenotrophomonas maltophilia, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5174..5401)
DNA (228bp) protein (76aa)
endonuclease; K05522 endonuclease VIII [EC:3.2.2.- 4.2.99.18]
Endonuclease n=1 Tax=Stenotrophomonas maltophilia D457 RepID=I0KNV4_STEMA
Endonuclease {ECO:0000313|EMBL:CCH12743.1}; TaxID=1163399 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas; Stenotrophomonas maltophilia group.;" source="Stenotrophomonas maltophilia D457.;"
scnpilot_solids1_trim150_scaffold_683_7
Stenotrophomonas sp. RIT309, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(5668..6087)
DNA (420bp) protein (140aa)
DNA-binding protein n=1 Tax=Stenotrophomonas maltophilia RepID=UPI000374E5AF
DNA-binding protein HNS {ECO:0000313|EMBL:EZP44500.1}; TaxID=1470590 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas.;" source="Stenotrophomonas sp. RIT309.;"
hns1; putative DNA-binding protein HNS; K03746 DNA-binding protein H-NS
scnpilot_solids1_trim150_scaffold_683_8
Nitrosomonas eutropha, Nitrosomonas, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(6401..7177)
DNA (777bp) protein (259aa)
short-chain dehydrogenase/reductase SDR; K00076 7-alpha-hydroxysteroid dehydrogenase [EC:1.1.1.159] rbh
7-alpha-hydroxysteroid dehydrogenase n=1 Tax=Pseudomonas caeni RepID=UPI0003B37263 rbh
Short-chain dehydrogenase/reductase SDR {ECO:0000313|EMBL:ABI59327.1}; TaxID=335283 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosomonas.;" source="Nitrosomonas eutropha (strain C91).;"
scnpilot_solids1_trim150_scaffold_683_9
Stenotrophomonas sp. SKA14, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7510..8082
DNA (573bp) protein (191aa)
Putative uncharacterized protein n=1 Tax=Stenotrophomonas sp. SKA14 RepID=B8LAE1_9GAMM rbh
Putative uncharacterized protein {ECO:0000313|EMBL:EED38732.1}; TaxID=391601 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas.;" source="Stenotrophomonas sp. SKA14.;"
hypothetical protein rbh
scnpilot_solids1_trim150_scaffold_683_10
Stenotrophomonas maltophilia, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8306..9334)
DNA (1029bp) protein (343aa)
Glycerol-3-phosphate dehydrogenase [NAD(P)+] {ECO:0000256|HAMAP-Rule:MF_00394}; EC=1.1.1.94 {ECO:0000256|HAMAP-Rule:MF_00394};; NAD(P)H-dependent glycerol-3-phosphate dehydrogenase {ECO:0000256|HAMAP-Rule:MF_00394}; TaxID=1451188 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas; Stenotrophomonas maltophilia group.;" source="Stenotrophomonas maltophilia M30.;"
gpsA; NAD(P)H-dependent glycerol-3-phosphate dehydrogenase (EC:1.1.1.94); K00057 glycerol-3-phosphate dehydrogenase (NAD(P)+) [EC:1.1.1.94] rbh
NAD(P)H-dependent glycerol-3-phosphate dehydrogenase n=1 Tax=Stenotrophomonas maltophilia RepID=UPI00030EAEB3 rbh
scnpilot_solids1_trim150_scaffold_683_11
Stenotrophomonas sp. SKA14, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9354..9866)
DNA (513bp) protein (171aa)
Protein-export protein SecB n=2 Tax=Stenotrophomonas RepID=B8L3D3_9GAMM
Protein-export protein SecB {ECO:0000256|HAMAP-Rule:MF_00821}; TaxID=391601 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas.;" source="Stenotrophomonas sp. SKA14.;"
protein-export protein SecB; K03071 preprotein translocase subunit SecB
scnpilot_solids1_trim150_scaffold_683_12
Stenotrophomonas rhizophila, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9971..10366)
DNA (396bp) protein (132aa)
membrane protein n=1 Tax=Stenotrophomonas maltophilia RepID=UPI0002E53FF3
Membrane protein {ECO:0000313|EMBL:AHY60822.1}; TaxID=216778 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas.;" source="Stenotrophomonas rhizophila.;"
Rhodanese-related sulfurtransferase
scnpilot_solids1_trim150_scaffold_683_13
Pseudoxanthomonas suwonensis, Pseudoxanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10473..10901)
DNA (429bp) protein (143aa)
hypothetical protein n=1 Tax=Stenotrophomonas maltophilia RepID=UPI0002D73FBB
Uncharacterized protein {ECO:0000313|EMBL:AKC86612.1}; TaxID=314722 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Pseudoxanthomonas.;" source="Pseudoxanthomonas suwonensis.;"
hypothetical protein
scnpilot_solids1_trim150_scaffold_683_14
Stenotrophomonas maltophilia, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10927..11385)
DNA (459bp) protein (153aa)
thioesterase n=1 Tax=Stenotrophomonas maltophilia RepID=UPI0003715CD2
Stenotrophomonas maltophilia strain ZBG7B contig_69, whole genome shotgun sequence {ECO:0000313|EMBL:KIP82591.1}; TaxID=40324 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas; Stenotrophomonas maltophilia group.;" source="Stenotrophomonas maltophilia (Pseudomonas maltophilia) (Xanthomonas; maltophilia).;"
thioesterase domain-containing protein
scnpilot_solids1_trim150_scaffold_683_15
Xanthomonas sacchari, Xanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11433..12218
DNA (786bp) protein (262aa)
Uroporphyrinogen-III synthase {ECO:0000313|EMBL:AJC46646.1}; EC=4.2.1.75 {ECO:0000313|EMBL:AJC46646.1};; TaxID=56458 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Xanthomonas.;" source="Xanthomonas sacchari.;"
uroporphyrinogen-III synthase (EC:4.2.1.75); K01719 uroporphyrinogen-III synthase [EC:4.2.1.75]
uroporphyrinogen III synthase n=1 Tax=Stenotrophomonas maltophilia RepID=UPI0002EB71B8
scnpilot_solids1_trim150_scaffold_683_16
Stenotrophomonas rhizophila, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12352..13296
DNA (945bp) protein (315aa)
uroporphyrin-III C-methyltransferase (EC:2.1.1.107); K02496 uroporphyrin-III C-methyltransferase [EC:2.1.1.107] rbh
uroporphyrin-III C-methyltransferase n=1 Tax=Xanthomonas sp. SHU199 RepID=UPI0003808DE0 rbh
Uroporphyrin-III methyltransferase {ECO:0000313|EMBL:AHY60826.1}; TaxID=216778 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas.;" source="Stenotrophomonas rhizophila.;"
scnpilot_solids1_trim150_scaffold_683_17
Xanthomonas translucens, Xanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13293..14555
DNA (1263bp) protein (421aa)
Putative cellulose synthase operon protein C n=1 Tax=Xanthomonas translucens pv. translucens DSM 18974 RepID=L0T3C9_XANCT rbh
Putative cellulose synthase operon protein C {ECO:0000313|EMBL:CCP41669.1}; TaxID=1261556 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Xanthomonas.;" source="Xanthomonas translucens pv. translucens DSM 18974.;"
membrane-anchored conserved protein; K02498 HemY protein rbh
scnpilot_solids1_trim150_scaffold_683_18
Pseudoxanthomonas suwonensis, Pseudoxanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14596..15042
DNA (447bp) protein (149aa)
Putative uncharacterized protein n=1 Tax=Pseudoxanthomonas suwonensis (strain 11-1) RepID=E6WVC8_PSEUU
hypothetical protein
Putative uncharacterized protein {ECO:0000313|EMBL:ADV28127.1}; TaxID=743721 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Pseudoxanthomonas.;" source="Pseudoxanthomonas suwonensis (strain 11-1).;"
scnpilot_solids1_trim150_scaffold_683_19
Xanthomonas sacchari, Xanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15062..15613)
DNA (552bp) protein (184aa)
hypothetical protein n=1 Tax=Xanthomonas sp. SHU308 RepID=UPI000369C1CA
Uncharacterized protein {ECO:0000313|EMBL:AJC46643.1}; TaxID=56458 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Xanthomonas.;" source="Xanthomonas sacchari.;"
hypothetical protein
scnpilot_solids1_trim150_scaffold_683_20
Pseudoxanthomonas suwonensis, Pseudoxanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15674..16588)
DNA (915bp) protein (305aa)
Putative uncharacterized protein n=1 Tax=Pseudoxanthomonas suwonensis (strain 11-1) RepID=E6WP61_PSEUU
hypothetical protein
Putative uncharacterized protein {ECO:0000313|EMBL:ADV25960.1}; Flags: Precursor;; TaxID=743721 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Pseudoxanthomonas.;" source="Pseudoxanthomonas suwonensis (strain 11-1).;"
scnpilot_solids1_trim150_scaffold_683_21
Stenotrophomonas sp. SKA14, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17042..18322)
DNA (1281bp) protein (427aa)
acetyl-CoA acetyltransferase (EC:2.3.1.16); K00626 acetyl-CoA C-acetyltransferase [EC:2.3.1.9] rbh
Acetyl-CoA acyltransferase FadA2 n=1 Tax=Stenotrophomonas sp. SKA14 RepID=B8L3E0_9GAMM rbh
Acetyl-CoA acyltransferase FadA2 {ECO:0000313|EMBL:EED39628.1}; TaxID=391601 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas.;" source="Stenotrophomonas sp. SKA14.;"
scnpilot_solids1_trim150_scaffold_683_22
Stenotrophomonas maltophilia, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18381..19316
DNA (936bp) protein (312aa)
Uncharacterized protein n=1 Tax=Stenotrophomonas maltophilia JV3 RepID=G0K3P2_STEMA rbh
hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:AEM49452.1}; TaxID=868597 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas; Stenotrophomonas maltophilia group.;" source="Stenotrophomonas maltophilia JV3.;"
scnpilot_solids1_trim150_scaffold_683_23
Stenotrophomonas sp. RIT309, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19391..20011)
DNA (621bp) protein (207aa)
Superoxide dismutase [Cu-Zn] {ECO:0000256|RuleBase:RU000393}; EC=1.15.1.1 {ECO:0000256|RuleBase:RU000393};; TaxID=1470590 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas.;" source="Stenotrophomonas sp. RIT309.;"
copper/zinc binding superoxide dismutase; K04565 Cu/Zn superoxide dismutase [EC:1.15.1.1]
Superoxide dismutase [Cu-Zn] n=1 Tax=Stenotrophomonas maltophilia SKK35 RepID=M5CIL7_STEMA
scnpilot_solids1_trim150_scaffold_683_24
Stenotrophomonas maltophilia, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20056..20625)
DNA (570bp) protein (190aa)
Superoxide dismutase [Cu-Zn] {ECO:0000256|RuleBase:RU000393}; EC=1.15.1.1 {ECO:0000256|RuleBase:RU000393};; TaxID=40324 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas; Stenotrophomonas maltophilia group.;" source="Stenotrophomonas maltophilia (Pseudomonas maltophilia) (Xanthomonas; maltophilia).;"
copper/zinc binding superoxide dismutase; K04565 Cu/Zn superoxide dismutase [EC:1.15.1.1]
superoxide dismutase n=1 Tax=Stenotrophomonas maltophilia RepID=UPI0002E7CB85
scnpilot_solids1_trim150_scaffold_683_25
Xanthomonas arboricola, Xanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20766..23228)
DNA (2463bp) protein (821aa)
serine/threonine protein kinase n=1 Tax=Xanthomonas arboricola RepID=UPI00035C466F rbh
Serine/threonine protein kinase {ECO:0000313|EMBL:KER86397.1}; TaxID=454957 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Xanthomonas.;" source="Xanthomonas arboricola pv. celebensis.;"
serine/threonine kinase rbh
scnpilot_solids1_trim150_scaffold_683_26
Stenotrophomonas sp. SKA14, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23416..24414)
DNA (999bp) protein (333aa)
Nitrogen regulation protein n=1 Tax=Stenotrophomonas sp. SKA14 RepID=B8L3E4_9GAMM
Nitrogen regulation protein {ECO:0000313|EMBL:EED38917.1}; TaxID=391601 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas.;" source="Stenotrophomonas sp. SKA14.;"
Fis family nitrogen metabolism transcriptional regulator NtrC; K07712 two-component system, NtrC family, nitrogen regulation response regulator GlnG
Displaying 26 items

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