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scnpilot_solids1_trim150_scaffold_747_1

Organism: SCNPILOT_SOLID_1_TRIM150_Stenotrophomonas_70_20

near complete RP 51 / 55 MC: 4 BSCG 50 / 51 MC: 2 ASCG 12 / 38
Location: 2..355

Top 3 Functional Annotations

Value Algorithm Source
Regulatory protein n=1 Tax=Stenotrophomonas sp. SKA14 RepID=B8L6K1_9GAMM similarity UNIREF
DB: UNIREF100
  • Identity: 61.3
  • Coverage: 119.0
  • Bit_score: 105
  • Evalue 4.30e-20
Regulatory protein {ECO:0000313|EMBL:EZP44114.1}; TaxID=1470590 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas.;" source="Stenotrophomonas sp. RIT309.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 62.4
  • Coverage: 117.0
  • Bit_score: 106
  • Evalue 3.60e-20
anti sigma-E protein RseA similarity KEGG
DB: KEGG
  • Identity: 60.2
  • Coverage: 118.0
  • Bit_score: 103
  • Evalue 3.90e-20

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Taxonomy

Stenotrophomonas sp. RIT309 → Stenotrophomonas → Xanthomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 354
GCGCCGGCCGTGGCCGCCGTGGCGCTGCGGCGTGCGGATGCATCGGTGCGGCGTGGCAGCGCCACCCGTACCCAGCAGGCGGCGCGCAGCGTGGCCGCGCGCCAGGCCGAGCCGGCGCGCGCAGTGGCCGCGCAGGCACCGCTGCCGGCGCTCCGCCGCGATCCGTTCGCCGACCCAGGCGGCGTGCTGCAGGCGCGTCCATGGCCGCGCTCGAGCCTGTCGCCGGCGCTGTCGGGCACCGCCTTGAATGCCAGTGCGCCGACGGAAGGCGGGGCGACCTTCTACCCGTTCGAGCCGCGGCTGCCATCCCAGAGTGGGCAGCCGGCGCCGGACACGCAACCGGCGCGGCCCTGA
PROTEIN sequence
Length: 118
APAVAAVALRRADASVRRGSATRTQQAARSVAARQAEPARAVAAQAPLPALRRDPFADPGGVLQARPWPRSSLSPALSGTALNASAPTEGGATFYPFEPRLPSQSGQPAPDTQPARP*