ggKbase home page

scnpilot_solids1_trim150_scaffold_1143_4

Organism: SCNPILOT_SOLID_1_TRIM150_Stenotrophomonas_70_20

near complete RP 51 / 55 MC: 4 BSCG 50 / 51 MC: 2 ASCG 12 / 38
Location: 3972..4622

Top 3 Functional Annotations

Value Algorithm Source
50S ribosomal protein L3 n=1 Tax=Xanthomonas vesicatoria ATCC 35937 RepID=F0BES2_9XANT similarity UNIREF
DB: UNIREF100
  • Identity: 94.4
  • Coverage: 216.0
  • Bit_score: 413
  • Evalue 1.00e-112
  • rbh
50S ribosomal protein L3 {ECO:0000256|HAMAP-Rule:MF_01325, ECO:0000256|RuleBase:RU003906}; TaxID=1470590 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas.;" source="Stenotrophomonas sp. RIT309.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 96.3
  • Coverage: 216.0
  • Bit_score: 414
  • Evalue 8.60e-113
rplC; 50S ribosomal protein L3; K02906 large subunit ribosomal protein L3 similarity KEGG
DB: KEGG
  • Identity: 95.8
  • Coverage: 216.0
  • Bit_score: 412
  • Evalue 7.30e-113
  • rbh

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Stenotrophomonas sp. RIT309 → Stenotrophomonas → Xanthomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 651
ATGACGAAGAAGTATTCGTTGGGCTTCGTGGGCCGCAAGGCCGGCATGAGCCGCGTTTTCACCGAGGACGGCCAGTCCATCCCGGTGACCCTGATCGAAGCCACCCCGAACCGCATCGCGCAGGTCAAGACCGTCGAAACCGACGGCTACAGCGCCGTGCAGGTGACCGTCGGCGCCCGTCGCGCCGCCCTGGTGAACAAGCCGGAAGCCGGCCACTTCGCCAAGGCCAAGGTCGAAGCCGGCCGTGGCCTGTGGGAATTCCGCGTCGAGGACGCCCAGGTCGGCGATTACGCCGTCGGTGGCGAAGTCAAGGCGGACATCTTTGCCGTTGGCCAGAAGGTCGACGTCCAGGGTGTCACCAAGGGCAAGGGCTTCCAGGGCACCATCAAGCGCTACAACTTCACCATGGGCGACGCCACCCACGGTAACTCGCTGTCGCATCGCGCGCCGGGTTCGTTGGGCCAGCGCCAGACCCCGGGTCGCGTTTTCCCGGGCAAGAAGATGGCCGGCCACATGGGTGCCGTGCAGCAGAGCACGCAGAACCTGGAAGTGGTCAAGGTCGACGTCGAGCGTGGTCTGATTGCCGTCCGTGGTGCCGTTCCGGGTGCTGCCGGTGGCGACGTGATCGTGCGTCCGGCGAGCAAGGCATAA
PROTEIN sequence
Length: 217
MTKKYSLGFVGRKAGMSRVFTEDGQSIPVTLIEATPNRIAQVKTVETDGYSAVQVTVGARRAALVNKPEAGHFAKAKVEAGRGLWEFRVEDAQVGDYAVGGEVKADIFAVGQKVDVQGVTKGKGFQGTIKRYNFTMGDATHGNSLSHRAPGSLGQRQTPGRVFPGKKMAGHMGAVQQSTQNLEVVKVDVERGLIAVRGAVPGAAGGDVIVRPASKA*