ggKbase home page

scnpilot_solids1_trim150_scaffold_1143_6

Organism: SCNPILOT_SOLID_1_TRIM150_Stenotrophomonas_70_20

near complete RP 51 / 55 MC: 4 BSCG 50 / 51 MC: 2 ASCG 12 / 38
Location: 5237..5536

Top 3 Functional Annotations

Value Algorithm Source
50S ribosomal protein L23 n=9 Tax=Stenotrophomonas RepID=RL23_STRM5 similarity UNIREF
DB: UNIREF100
  • Identity: 98.0
  • Coverage: 99.0
  • Bit_score: 189
  • Evalue 1.90e-45
rplW; 50S ribosomal protein L23; K02892 large subunit ribosomal protein L23 similarity KEGG
DB: KEGG
  • Identity: 98.0
  • Coverage: 99.0
  • Bit_score: 189
  • Evalue 6.10e-46
50S ribosomal protein L23 {ECO:0000256|HAMAP-Rule:MF_01369, ECO:0000256|RuleBase:RU003935}; TaxID=1118157 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas; Stenotrophomonas maltophilia group.;" source="Stenotrophomonas maltophilia RA8.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 98.0
  • Coverage: 99.0
  • Bit_score: 189
  • Evalue 2.70e-45

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Stenotrophomonas maltophilia → Stenotrophomonas → Xanthomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 300
ATGAGCAGCAACGAAAAAATCTTCAGCGTGCTGCGCGCTCCGCGAGTCTCCGAAAAGACCGCGCGCCTGCAGGAACTCTCCAACCAGTACGTCTTCGAAGTCTCGAACGAAGCAACCAAGGCCGATGTGAAGGCCGCGGTCGAGCAGCTGTTCGACGTCAAGGTCGAGGCCGTCAACGTGGTCAACGTCAAGGGCAAGAGCAAGTCCTTCCGTAACCGCGCTGGCCGCCGCGGCGATTGGCGCAAGGCGTACGTGCGCCTGGCCGATGGCCAGTCCATCGATGTAACGGCCAAGGCCTGA
PROTEIN sequence
Length: 100
MSSNEKIFSVLRAPRVSEKTARLQELSNQYVFEVSNEATKADVKAAVEQLFDVKVEAVNVVNVKGKSKSFRNRAGRRGDWRKAYVRLADGQSIDVTAKA*