ggKbase home page

scnpilot_solids1_trim150_scaffold_4191_8

Organism: SCNPILOT_SOLID_1_TRIM150_Stenotrophomonas_70_20

near complete RP 51 / 55 MC: 4 BSCG 50 / 51 MC: 2 ASCG 12 / 38
Location: 4301..5524

Top 3 Functional Annotations

Value Algorithm Source
DNA-directed RNA polymerase subunit beta {ECO:0000256|HAMAP-Rule:MF_01321}; Short=RNAP subunit beta {ECO:0000256|HAMAP-Rule:MF_01321};; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_01321};; RNA polymerase subunit beta {ECO:0000256|HAMAP-Rule:MF_01321}; Transcriptase subunit beta {ECO:0000256|HAMAP-Rule:MF_01321}; TaxID=391601 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas.;" source="Stenotrophomonas sp. SKA14.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 95.1
  • Coverage: 408.0
  • Bit_score: 777
  • Evalue 1.20e-221
DNA-directed RNA polymerase subunit beta; K03043 DNA-directed RNA polymerase subunit beta [EC:2.7.7.6] similarity KEGG
DB: KEGG
  • Identity: 95.1
  • Coverage: 408.0
  • Bit_score: 775
  • Evalue 6.20e-222
DNA-directed RNA polymerase subunit beta n=1 Tax=Stenotrophomonas maltophilia RepID=UPI000312F12B similarity UNIREF
DB: UNIREF100
  • Identity: 95.6
  • Coverage: 408.0
  • Bit_score: 778
  • Evalue 3.00e-222

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Stenotrophomonas sp. SKA14 → Stenotrophomonas → Xanthomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1224
ATGACGTCCTATTCGTACACCGAAAAAAAGCGCATCCGCAAGGATTTCGGCAAGCAGCGCTCGATCCTCGAGGTGCCGTTCCTGCTGGCCATCCAGGTCGACTCCTACCGCGAGTTCCTGCAGGAGAACACTGACCCGGCCAAGCGCTCCGACCACGGCCTGCACGCCGCGCTGAAGTCGGTGTTCCCGATCTCCAGCTACAGCGGCAACGCCGCCCTGGAGTACGTGGGCTACAAGCTGGGCGAGCCGGTGTTCGACGAGCGCGAGTGCCGCCAGCGTGGCATGAGCTACGGCGCCCCGCTGCGCGTGACCGTGCGCCTGGTCATCTACGACAAGGAATCGTCCACCAAGGCGATCAAGTACGTGAAGGAGCAGGAGGTCTACCTCGGCGAAATCCCGCTGATGACCGACAACGGCACCTTCATCGTCAACGGTACCGAGCGCGTCATCGTTTCGCAGCTGCACCGTTCGCCGGGCGTGTTCTTCGACCACGACCGCGGCAAGACGCACAGCTCGGGCAAGCTGCTGTACAGCGCCCGCATCATTCCTTACCGCGGCTCCTGGCTGGACTTCGAGTTCGACCCGAAGGACGCGCTGTTCACCCGTATCGACCGCCGCCGCAAGCTGCCGGTGTCGATCCTGCTGCGCGCGCTCGGCTACAACAACGAAGAAATGCTCAACGAGTTCTTCGACATCAACACCTTCCACATCCTGCCGGAAGGCGAGGGCGTGCAGCTGGAGCTGGTGGCCGAACGCCTGCGTGGCGAGACCCTGGGCTTCGACCTGGCCGATGGCGACAAGGTCATCGTGGAAGCCGGCAAGCGCATCACCGCGCGCCACGTCAAGCAGCTGCAGGCCTCGGGCATCGCCGCGCTGGCCGTGCCGGACGACTACCTGGTGGGCCGCATCCTGTCGCATGACGTGGTCGACGCCAACACCGGCGAACTGCTGGCCCAGGCCAACGACGAGATCACCGAAGAGCAGCTGCAGAACTTCCGCAAGGCCGGCGTGGATGCGGTCGGCACCCTGTGGGTGAACGACCTGGACCGTGGCCCGTACCTGTCCAACACCCTGCGCATCGACCCGACCAAGACCCAGCTCGAGGCCCTGGTCGAGATCTACCGCATGATGCGCCCGGGCGAGCCGCCGACCAAGGACGCCGCGCAGAACCTGTTCCACAACCTGTTCTTCACCTTCGAGCGCTACGACCTGTCCACGGTCGGC
PROTEIN sequence
Length: 408
MTSYSYTEKKRIRKDFGKQRSILEVPFLLAIQVDSYREFLQENTDPAKRSDHGLHAALKSVFPISSYSGNAALEYVGYKLGEPVFDERECRQRGMSYGAPLRVTVRLVIYDKESSTKAIKYVKEQEVYLGEIPLMTDNGTFIVNGTERVIVSQLHRSPGVFFDHDRGKTHSSGKLLYSARIIPYRGSWLDFEFDPKDALFTRIDRRRKLPVSILLRALGYNNEEMLNEFFDINTFHILPEGEGVQLELVAERLRGETLGFDLADGDKVIVEAGKRITARHVKQLQASGIAALAVPDDYLVGRILSHDVVDANTGELLAQANDEITEEQLQNFRKAGVDAVGTLWVNDLDRGPYLSNTLRIDPTKTQLEALVEIYRMMRPGEPPTKDAAQNLFHNLFFTFERYDLSTVG