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scnpilot_solids1_trim150_scaffold_4191

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Displaying 9 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_solids1_trim150_scaffold_4191_1
Xanthomonas campestris, Xanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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1..99
DNA (99bp) protein (33aa)
Elongation factor Tu 1 n=6 Tax=Xanthomonas RepID=EFTU1_XANC8
tuf; translation elongation factor Tu
Elongation factor Tu 1 {ECO:0000255|HAMAP-Rule:MF_00118}; Short=EF-Tu 1 {ECO:0000255|HAMAP-Rule:MF_00118};; TaxID=509169 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Xanthomonas.;" source="Xanthomonas campestris pv. campestris (strain B100).;"
scnpilot_solids1_trim150_scaffold_4191_trna_1
unknown

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207..279
DNA (73bp)
transferRNA Trp
scnpilot_solids1_trim150_scaffold_4191_2
Stenotrophomonas maltophilia, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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330..737
DNA (408bp) protein (136aa)
Protein translocase subunit SecE n=3 Tax=Stenotrophomonas maltophilia RepID=B4SKV0_STRM5
Protein translocase subunit SecE {ECO:0000256|HAMAP-Rule:MF_00422}; TaxID=40324 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas; Stenotrophomonas maltophilia group.;" source="Stenotrophomonas maltophilia (Pseudomonas maltophilia) (Xanthomonas; maltophilia).;"
secE; preprotein translocase subunit SecE; K03073 preprotein translocase subunit SecE
scnpilot_solids1_trim150_scaffold_4191_3
Stenotrophomonas maltophilia, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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748..1308
DNA (561bp) protein (187aa)
Transcription termination/antitermination protein NusG n=9 Tax=Stenotrophomonas RepID=B2FQ33_STRMK rbh
nusG; transcription antitermination protein NusG; K02601 transcriptional antiterminator NusG rbh
Transcription termination/antitermination protein NusG {ECO:0000256|HAMAP-Rule:MF_00948, ECO:0000256|SAAS:SAAS00078489}; TaxID=1333853 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas; Stenotrophomonas maltophilia group.;" source="Stenotrophomonas maltophilia MF89.;"
scnpilot_solids1_trim150_scaffold_4191_4
Stenotrophomonas maltophilia, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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1511..1939
DNA (429bp) protein (143aa)
50S ribosomal protein L11 n=11 Tax=Stenotrophomonas RepID=RL11_STRM5
50S ribosomal protein L11; K02867 large subunit ribosomal protein L11
50S ribosomal protein L11 {ECO:0000256|HAMAP-Rule:MF_00736, ECO:0000256|SAAS:SAAS00021680}; TaxID=1183154 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas; Stenotrophomonas maltophilia group.;" source="Stenotrophomonas maltophilia Ab55555.;"
scnpilot_solids1_trim150_scaffold_4191_5
Stenotrophomonas maltophilia, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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1944..2642
DNA (699bp) protein (233aa)
50S ribosomal protein L1 n=2 Tax=Stenotrophomonas maltophilia RepID=I0KJW6_STEMA rbh
rplA; 50S ribosomal protein L1; K02863 large subunit ribosomal protein L1 rbh
50S ribosomal protein L1 {ECO:0000256|HAMAP-Rule:MF_01318}; TaxID=1451188 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas; Stenotrophomonas maltophilia group.;" source="Stenotrophomonas maltophilia M30.;"
scnpilot_solids1_trim150_scaffold_4191_6
Stenotrophomonas sp. RIT309, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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3026..3559
DNA (534bp) protein (178aa)
50S ribosomal protein L10 n=1 Tax=Stenotrophomonas maltophilia EPM1 RepID=M3F1Y3_STEMA rbh
50S ribosomal protein L10 {ECO:0000256|HAMAP-Rule:MF_00362}; TaxID=1470590 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas.;" source="Stenotrophomonas sp. RIT309.;"
rplJ; 50S ribosomal protein L10; K02864 large subunit ribosomal protein L10 rbh
scnpilot_solids1_trim150_scaffold_4191_7
Stenotrophomonas maltophilia, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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3623..3991
DNA (369bp) protein (123aa)
50S ribosomal protein L7 n=1 Tax=Stenotrophomonas maltophilia RepID=UPI00030CA5A2
rplL; 50S ribosomal protein L7/L12; K02935 large subunit ribosomal protein L7/L12
50S ribosomal protein L7/L12 {ECO:0000256|HAMAP-Rule:MF_00368}; TaxID=1163399 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas; Stenotrophomonas maltophilia group.;" source="Stenotrophomonas maltophilia D457.;"
scnpilot_solids1_trim150_scaffold_4191_8
Stenotrophomonas sp. SKA14, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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4301..5524
DNA (1224bp) protein (408aa)
DNA-directed RNA polymerase subunit beta {ECO:0000256|HAMAP-Rule:MF_01321}; Short=RNAP subunit beta {ECO:0000256|HAMAP-Rule:MF_01321};; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_01321};; RNA polymerase subunit beta {ECO:0000256|HAMAP-Rule:MF_01321}; Transcriptase subunit beta {ECO:0000256|HAMAP-Rule:MF_01321}; TaxID=391601 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas.;" source="Stenotrophomonas sp. SKA14.;"
DNA-directed RNA polymerase subunit beta; K03043 DNA-directed RNA polymerase subunit beta [EC:2.7.7.6]
DNA-directed RNA polymerase subunit beta n=1 Tax=Stenotrophomonas maltophilia RepID=UPI000312F12B
Displaying 9 items

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