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scnpilot_solids1_trim150_scaffold_22565_1

Organism: SCNPILOT_SOLID_1_TRIM150_Stenotrophomonas_70_20

near complete RP 51 / 55 MC: 4 BSCG 50 / 51 MC: 2 ASCG 12 / 38
Location: comp(1..198)

Top 3 Functional Annotations

Value Algorithm Source
Conjugal transfer protein TrbC n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WP27_9GAMM similarity UNIREF
DB: UNIREF100
  • Identity: 98.5
  • Coverage: 66.0
  • Bit_score: 129
  • Evalue 9.20e-28
Conjugal transfer protein TrbC {ECO:0000313|EMBL:EIM01219.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 98.5
  • Coverage: 66.0
  • Bit_score: 129
  • Evalue 1.30e-27
conjugal transfer protein TrbC; K03197 type IV secretion system protein VirB2 similarity KEGG
DB: KEGG
  • Identity: 60.6
  • Coverage: 66.0
  • Bit_score: 71
  • Evalue 1.20e-10

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Taxonomy

Rhodanobacter thiooxydans → Rhodanobacter → Xanthomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 198
ATGACACGAACACGCTTTTACGACGATCCGCTTGTCCGTAACGCGTGGCCTTGGCTGCTGCTCCTGCTGATGTGCCTGGCGGCGACGGCCGCCCACGCGGCCGGCTCCAACATGCCGTGGGAAGCGCCGCTGCAATCCATTCTCGATTCGATCCAGGGACCGGTCGCCAAGATCATCGCGGTCATCGTCATCATCGTG
PROTEIN sequence
Length: 66
MTRTRFYDDPLVRNAWPWLLLLLMCLAATAAHAAGSNMPWEAPLQSILDSIQGPVAKIIAVIVIIV