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scnpilot_solids1_trim150_scaffold_22565_2

Organism: SCNPILOT_SOLID_1_TRIM150_Stenotrophomonas_70_20

near complete RP 51 / 55 MC: 4 BSCG 50 / 51 MC: 2 ASCG 12 / 38
Location: comp(195..1208)

Top 3 Functional Annotations

Value Algorithm Source
P-type conjugative transfer ATPase TrbB n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WP26_9GAMM similarity UNIREF
DB: UNIREF100
  • Identity: 94.4
  • Coverage: 337.0
  • Bit_score: 613
  • Evalue 1.80e-172
P-type conjugative transfer ATPase TrbB {ECO:0000313|EMBL:EIM01218.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 94.4
  • Coverage: 337.0
  • Bit_score: 613
  • Evalue 2.60e-172
p-type conjugative transfer ATPase trbb; K03196 type IV secretion system protein VirB11 similarity KEGG
DB: KEGG
  • Identity: 83.6
  • Coverage: 323.0
  • Bit_score: 518
  • Evalue 1.90e-144

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Taxonomy

Rhodanobacter thiooxydans → Rhodanobacter → Xanthomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1014
ATGAGCGTGCAGCCGCACGACCTGTTGACGGCGGCTGCCCGGTCGCTGGATCGGCGTGTGCGCATGCTGCGAACAGCCATGGGGCCATTGATCGCAGCTGCGCTGGAGGACCCGGATGTGGTGGAGATCCTGCTCAATCCAGACGGTTCGTTGTGGATCGACCGGCTGTCCAGCGGGCGCACTCCGACGGATGTACGGCTTTCCGCTGCCGATGGTGAGCGCATCATCCGGCTTGTCGCCGCCCATGTGCGCGTCGAAGTGCATGCCGGCAAGCCGTTGCTGTCGGCGGAGCTGCCCGAAACCGGTGAACGCTTCGAGGGCATTCTGCCGCCGGCGGCACTGGGACCGGCTTTCGCGCTGCGCAAGCGTGCGGTCGGCGTGATCCCGCTCGAACGCTACGTGAGCGACGGGATGATGACGGCCGCGCAAGCGGGTTTCCTTGTGCGCGCCGTGCGCGAGCGCCAGAACATCCTGATCGCCGGTGGTACCAGTAGTGGCAAGACCACGCTCGCCAATGCCTTGCTCGCGGAGATTGCCGCCACCGGTGACCGCGTACTGGTGCTCGAGGATACGGTGGAACTGCAATGCGCGGCACGCGATCACGTGCCGCTGCGCACGTTGCCGGGCGTCGTGTCGATGACGGAACTTGTGCGGGCCACGATGCGGCTGCGTCCCGACCGCGTGATTGTCGGCGAGGTGCGCGGCGGCGAAGCTCTCGATCTGGTCAAGGTCTGGGGCACCGGCCATCCGGGCGGCATCGCCACCGTGCACGCTGGTTCCGCTCACGGTGCGTTGCTGCGCCTGGAGCAACTGATTCTCGAAGTCGCCGTGACCCCGCCGCGCGCGCTGATCGCCGAGGCAGTCGACGTCGTCGTCTTCATCGCCGGCCGCGGCCGTGCCCGACGCATCCAGGACATCGCTCGCGTCGCCGGTTTCGACGAGCGCGGCTACCGGCTCGATGCCGTGCCCGATACGTCGTCTTCCTTATCCGCTACTCCAGGAGTCCCGTCATGA
PROTEIN sequence
Length: 338
MSVQPHDLLTAAARSLDRRVRMLRTAMGPLIAAALEDPDVVEILLNPDGSLWIDRLSSGRTPTDVRLSAADGERIIRLVAAHVRVEVHAGKPLLSAELPETGERFEGILPPAALGPAFALRKRAVGVIPLERYVSDGMMTAAQAGFLVRAVRERQNILIAGGTSSGKTTLANALLAEIAATGDRVLVLEDTVELQCAARDHVPLRTLPGVVSMTELVRATMRLRPDRVIVGEVRGGEALDLVKVWGTGHPGGIATVHAGSAHGALLRLEQLILEVAVTPPRALIAEAVDVVVFIAGRGRARRIQDIARVAGFDERGYRLDAVPDTSSSLSATPGVPS*