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scnpilot_solids1_trim150_scaffold_3229

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Displaying 16 items
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_solids1_trim150_scaffold_3229_1
Gemmatimonas aurantiaca, Gemmatimonas, Gemmatimonadales, Gemmatimonadetes, Gemmatimonadetes, Bacteria

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comp(1..381)
DNA (381bp) protein (127aa)
50S ribosomal protein L15 n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A6S4_GEMAT
rplO; 50S ribosomal protein L15; K02876 large subunit ribosomal protein L15
50S ribosomal protein L15 {ECO:0000256|HAMAP-Rule:MF_01341, ECO:0000256|RuleBase:RU003889}; TaxID=379066 species="Bacteria; Gemmatimonadetes; Gemmatimonadales; Gemmatimonadaceae; Gemmatimonas.;" source="Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC; 100505).;"
scnpilot_solids1_trim150_scaffold_3229_2
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists


comp(389..643)
DNA (255bp) protein (85aa)
50S ribosomal protein L30 n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A6S3_GEMAT
50S ribosomal protein L30 {ECO:0000256|SAAS:SAAS00082687}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
rpmD; 50S ribosomal protein L30; K02907 large subunit ribosomal protein L30
scnpilot_solids1_trim150_scaffold_3229_3
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists


comp(643..1131)
DNA (489bp) protein (163aa)
30S ribosomal protein S5 n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A6S2_GEMAT
30S ribosomal protein S5 {ECO:0000256|HAMAP-Rule:MF_01307, ECO:0000256|SAAS:SAAS00085406}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
rpsE; 30S ribosomal protein S5; K02988 small subunit ribosomal protein S5
scnpilot_solids1_trim150_scaffold_3229_4
unknown

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comp(1128..1355)
DNA (228bp) protein (76aa)

This feature has no annotations

scnpilot_solids1_trim150_scaffold_3229_5
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists


comp(1385..1738)
DNA (354bp) protein (118aa)
50S ribosomal protein L18 n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A6S1_GEMAT
50S ribosomal protein L18 {ECO:0000256|HAMAP-Rule:MF_01337}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
rplR; 50S ribosomal protein L18; K02881 large subunit ribosomal protein L18
scnpilot_solids1_trim150_scaffold_3229_6
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists


comp(1738..2277)
DNA (540bp) protein (180aa)
50S ribosomal protein L6 n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=RL6_GEMAT
50S ribosomal protein L6 {ECO:0000256|HAMAP-Rule:MF_01365, ECO:0000256|RuleBase:RU003870}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
rplF; 50S ribosomal protein L6; K02933 large subunit ribosomal protein L6
scnpilot_solids1_trim150_scaffold_3229_7
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists


comp(2292..2693)
DNA (402bp) protein (134aa)
30S ribosomal protein S8 n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A6R9_GEMAT
30S ribosomal protein S8 {ECO:0000256|HAMAP-Rule:MF_01302}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
rpsH; 30S ribosomal protein S8; K02994 small subunit ribosomal protein S8
scnpilot_solids1_trim150_scaffold_3229_8
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists


comp(2813..3118)
DNA (306bp) protein (102aa)
30S ribosomal protein S14 n=1 Tax=Streptomyces roseochromogenes subsp. oscitans DS 12.976 RepID=V6KMJ9_STRRC
30S ribosomal protein S14 {ECO:0000256|HAMAP-Rule:MF_00537}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
30S ribosomal protein S14; K02954 small subunit ribosomal protein S14
scnpilot_solids1_trim150_scaffold_3229_9
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists


comp(3169..3915)
DNA (747bp) protein (249aa)
50S ribosomal protein L5 n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A6R7_GEMAT
50S ribosomal protein L5 {ECO:0000256|HAMAP-Rule:MF_01333}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
rplE; 50S ribosomal protein L5; K02931 large subunit ribosomal protein L5
scnpilot_solids1_trim150_scaffold_3229_10
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists


comp(3933..4331)
DNA (399bp) protein (133aa)
50S ribosomal protein L24 n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A6R6_GEMAT
50S ribosomal protein L24 {ECO:0000256|HAMAP-Rule:MF_01326}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
rplX; 50S ribosomal protein L24; K02895 large subunit ribosomal protein L24
scnpilot_solids1_trim150_scaffold_3229_11
Gemmatimonas aurantiaca, Gemmatimonas, Gemmatimonadales, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists


comp(4333..4701)
DNA (369bp) protein (123aa)
50S ribosomal protein L14 n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=RL14_GEMAT
rplN; 50S ribosomal protein L14; K02874 large subunit ribosomal protein L14
50S ribosomal protein L14 {ECO:0000255|HAMAP-Rule:MF_01367}; TaxID=379066 species="Bacteria; Gemmatimonadetes; Gemmatimonadales; Gemmatimonadaceae; Gemmatimonas.;" source="Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC; 100505).;"
scnpilot_solids1_trim150_scaffold_3229_12
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists


comp(4718..5023)
DNA (306bp) protein (102aa)
30S ribosomal protein S17 n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A6R4_GEMAT
rpsQ; 30S ribosomal protein S17; K02961 small subunit ribosomal protein S17
30S ribosomal protein S17 {ECO:0000256|HAMAP-Rule:MF_01345, ECO:0000256|RuleBase:RU003873}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
scnpilot_solids1_trim150_scaffold_3229_13
Gemmatimonas aurantiaca, Gemmatimonas, Gemmatimonadales, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists


comp(5042..5332)
DNA (291bp) protein (97aa)
50S ribosomal protein L29 n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=RL29_GEMAT
rpmC; 50S ribosomal protein L29; K02904 large subunit ribosomal protein L29
50S ribosomal protein L29 {ECO:0000255|HAMAP-Rule:MF_00374}; TaxID=379066 species="Bacteria; Gemmatimonadetes; Gemmatimonadales; Gemmatimonadaceae; Gemmatimonas.;" source="Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC; 100505).;"
scnpilot_solids1_trim150_scaffold_3229_14
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists


comp(5322..5750)
DNA (429bp) protein (143aa)
50S ribosomal protein L16 n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=RL16_GEMAT
50S ribosomal protein L16 {ECO:0000256|HAMAP-Rule:MF_01342, ECO:0000256|RuleBase:RU004414}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
rplP; 50S ribosomal protein L16; K02878 large subunit ribosomal protein L16
scnpilot_solids1_trim150_scaffold_3229_15
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists


comp(5764..6423)
DNA (660bp) protein (220aa)
30S ribosomal protein S3 n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=RS3_GEMAT rbh
30S ribosomal protein S3 {ECO:0000256|HAMAP-Rule:MF_01309}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
rpsC; 30S ribosomal protein S3; K02982 small subunit ribosomal protein S3 rbh
scnpilot_solids1_trim150_scaffold_3229_16
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists


comp(6423..6749)
DNA (327bp) protein (109aa)
50S ribosomal protein L22 n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A6R0_GEMAT
50S ribosomal protein L22 {ECO:0000256|HAMAP-Rule:MF_01331, ECO:0000256|RuleBase:RU004008}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
rplV; 50S ribosomal protein L22; K02890 large subunit ribosomal protein L22
Displaying 16 items

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