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scnpilot_solids1_trim150_scaffold_29

Search features with annotation key words

Displaying items 1-30 of 195 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_solids1_trim150_scaffold_29_1
Achromobacter piechaudii, Achromobacter, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1..306)
DNA (306bp) protein (102aa)
Phage prohead protease, HK97 family {ECO:0000313|EMBL:EFF76880.1}; EC=3.4.-.- {ECO:0000313|EMBL:EFF76880.1};; TaxID=742159 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Achromobacter.;" source="Achromobacter piechaudii ATCC 43553.;"
Phage prohead protease, HK97 family n=1 Tax=Achromobacter piechaudii ATCC 43553 RepID=D4X8L2_9BURK
HK97 family phage prohead protease; K06904
scnpilot_solids1_trim150_scaffold_29_2
Pseudomonas aeruginosa, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(466..1533)
DNA (1068bp) protein (356aa)
Putative phage-related protein n=1 Tax=Pseudomonas aeruginosa (strain PA7) RepID=A6VBQ1_PSEA7
putative phage-like protein
Putative phage-related protein {ECO:0000313|EMBL:ABR86617.1}; TaxID=381754 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas aeruginosa (strain PA7).;"
scnpilot_solids1_trim150_scaffold_29_3
Oxalobacter formigenes, Oxalobacter, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2173..2655)
DNA (483bp) protein (161aa)
Uncharacterized protein n=1 Tax=Oxalobacter formigenes HOxBLS RepID=C3X4R5_OXAFO
Uncharacterized protein {ECO:0000313|EMBL:EEO28201.1}; TaxID=556268 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Oxalobacter.;" source="Oxalobacter formigenes HOxBLS.;"
hypothetical protein
scnpilot_solids1_trim150_scaffold_29_4
Burkholderia pseudomallei, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2642..2941)
DNA (300bp) protein (100aa)
Uncharacterized protein n=2 Tax=Burkholderia pseudomallei RepID=Q63VU0_BURPS
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CAH35149.1}; TaxID=272560 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia; pseudomallei group.;" source="Burkholderia pseudomallei (strain K96243).;"
scnpilot_solids1_trim150_scaffold_29_5
Nitrosospira lacus, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2931..3155)
DNA (225bp) protein (75aa)
Uncharacterized protein n=1 Tax=Nitrosospira sp. APG3 RepID=M5DH69_9PROT
Uncharacterized protein {ECO:0000313|EMBL:CCU62641.1}; TaxID=1288494 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira lacus.;"
phage transcriptional regulator
scnpilot_solids1_trim150_scaffold_29_6
unknown

Not on your lists

comp(3510..3932)
DNA (423bp) protein (141aa)

This feature has no annotations

scnpilot_solids1_trim150_scaffold_29_7
unknown

Not on your lists

comp(3997..4677)
DNA (681bp) protein (227aa)

This feature has no annotations

scnpilot_solids1_trim150_scaffold_29_8
Nitrosospira lacus, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4765..5964)
DNA (1200bp) protein (400aa)
Integrase n=1 Tax=Nitrosospira sp. APG3 RepID=M5DTD8_9PROT rbh
Integrase {ECO:0000313|EMBL:CCU62645.1}; TaxID=1288494 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira lacus.;"
integrase family protein rbh
scnpilot_solids1_trim150_scaffold_29_trna_1
unknown

Not on your lists

comp(6130..6215)
DNA (86bp)
transferRNA Leu
scnpilot_solids1_trim150_scaffold_29_9
RIFOXYD12_FULL_Deltaproteobacteria_53_23_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6572..6877
DNA (306bp) protein (102aa)
Uncharacterized protein n=1 Tax=Acetobacteraceae bacterium AT-5844 RepID=G9ZYU0_9PROT
Tax=RIFOXYD12_FULL_Deltaproteobacteria_53_23_curated
scnpilot_solids1_trim150_scaffold_29_10
Nitrosospira multiformis, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7090..7584)
DNA (495bp) protein (165aa)
Uncharacterized protein n=1 Tax=Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849) RepID=Q2Y9G4_NITMU
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABB74607.1}; TaxID=323848 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849).;"
scnpilot_solids1_trim150_scaffold_29_11
unknown

Not on your lists

comp(7615..7842)
DNA (228bp) protein (76aa)

This feature has no annotations

scnpilot_solids1_trim150_scaffold_29_12
Nitrosospira multiformis, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8283..8696
DNA (414bp) protein (138aa)
Flagellar transcriptional regulator FlhD n=1 Tax=Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849) RepID=Q2Y9G3_NITMU
transcriptional activator FlhD; K02403 flagellar transcriptional activator FlhD
Flagellar transcriptional regulator FlhD {ECO:0000256|HAMAP-Rule:MF_00725, ECO:0000256|SAAS:SAAS00011626}; TaxID=323848 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849).;"
scnpilot_solids1_trim150_scaffold_29_13
Nitrosospira multiformis, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8775..9323
DNA (549bp) protein (183aa)
Flagellar transcriptional regulator FlhC n=1 Tax=Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849) RepID=Q2Y9G2_NITMU rbh
transcriptional activator FlhC; K02402 flagellar transcriptional activator FlhC rbh
Flagellar transcriptional regulator FlhC {ECO:0000256|HAMAP-Rule:MF_01891, ECO:0000256|PIRNR:PIRNR003159}; TaxID=323848 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849).;"
scnpilot_solids1_trim150_scaffold_29_14
Nitrosospira multiformis, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9697..10557
DNA (861bp) protein (287aa)
Probable chemotaxis (Motility protein A) transmembrane n=1 Tax=Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849) RepID=Q2Y9G1_NITMU rbh
chemotaxis (motility protein A) transmembrane; K02556 chemotaxis protein MotA rbh
Probable chemotaxis (Motility protein A) transmembrane {ECO:0000313|EMBL:ABB74610.1}; Flags: Precursor;; TaxID=323848 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849).;"
scnpilot_solids1_trim150_scaffold_29_15
Nitrosospira multiformis, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10579..11505
DNA (927bp) protein (309aa)
OmpA/MotB n=1 Tax=Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849) RepID=Q2Y9G0_NITMU rbh
motB; flagellar motor protein MotB; K02557 chemotaxis protein MotB rbh
OmpA/MotB {ECO:0000313|EMBL:ABB74611.1}; TaxID=323848 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849).;"
scnpilot_solids1_trim150_scaffold_29_16
Nitrosospira multiformis, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11802..12980
DNA (1179bp) protein (393aa)
Flagellar biosynthetic protein FlhB n=1 Tax=Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849) RepID=Q2Y9F9_NITMU rbh
flhB; flagellar biosynthesis protein FlhB; K02401 flagellar biosynthetic protein FlhB rbh
Flagellar biosynthetic protein FlhB {ECO:0000313|EMBL:ABB74612.1}; TaxID=323848 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849).;"
scnpilot_solids1_trim150_scaffold_29_17
Nitrosospira multiformis, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12983..15061
DNA (2079bp) protein (693aa)
Flagellar biosynthesis protein FlhA n=1 Tax=Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849) RepID=Q2Y9F8_NITMU rbh
flagellar biosynthesis protein FlhA; K02400 flagellar biosynthesis protein FlhA rbh
Flagellar biosynthesis protein FlhA {ECO:0000313|EMBL:ABB74613.1}; Flags: Precursor;; TaxID=323848 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849).;"
scnpilot_solids1_trim150_scaffold_29_18
Nitrosospira multiformis, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15058..16740
DNA (1683bp) protein (561aa)
GTP-binding signal recognition particle SRP54, G-domain n=1 Tax=Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849) RepID=Q2Y9F7_NITMU rbh
flhF; flagellar biosynthesis regulator FlhF; K02404 flagellar biosynthesis protein FlhF rbh
GTP-binding signal recognition particle SRP54, G-domain {ECO:0000313|EMBL:ABB74614.1}; TaxID=323848 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849).;"
scnpilot_solids1_trim150_scaffold_29_19
Nitrosospira multiformis, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16688..17626
DNA (939bp) protein (313aa)
Site-determining protein n=1 Tax=Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849) RepID=Q2Y9F6_NITMU rbh
putative MinD-like protein; K04562 flagellar biosynthesis protein FlhG rbh
Putative MinD-related protein {ECO:0000313|EMBL:ABB74615.1}; TaxID=323848 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849).;"
scnpilot_solids1_trim150_scaffold_29_20
Nitrosospira multiformis, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17638..18366
DNA (729bp) protein (243aa)
RNA polymerase sigma factor FliA n=1 Tax=Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849) RepID=Q2Y9F5_NITMU rbh
sigma 28 (flagella/sporulation); K02405 RNA polymerase sigma factor for flagellar operon FliA rbh
RNA polymerase sigma factor FliA {ECO:0000256|HAMAP-Rule:MF_00962}; RNA polymerase sigma factor for flagellar operon {ECO:0000256|HAMAP-Rule:MF_00962}; Sigma F {ECO:0000256|HAMAP-Rule:MF_00962}; Sigma-28 {ECO:0000256|HAMAP-Rule:MF_00962}; TaxID=323848 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849).;"
scnpilot_solids1_trim150_scaffold_29_21
Nitrosospira multiformis, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18342..19088
DNA (747bp) protein (249aa)
MotA/TolQ/ExbB proton channel n=1 Tax=Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849) RepID=Q2Y9F4_NITMU rbh
motC; flagellar motor protein; K02556 chemotaxis protein MotA rbh
MotA/TolQ/ExbB proton channel {ECO:0000313|EMBL:ABB74617.1}; TaxID=323848 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849).;"
scnpilot_solids1_trim150_scaffold_29_22
Nitrosospira multiformis, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19178..20047
DNA (870bp) protein (290aa)
OmpA/MotB n=1 Tax=Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849) RepID=Q2Y9F3_NITMU rbh
flagellar motor protein MotD; K02557 chemotaxis protein MotB rbh
OmpA/MotB {ECO:0000313|EMBL:ABB74618.1}; TaxID=323848 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849).;"
scnpilot_solids1_trim150_scaffold_29_23
Nitrosospira multiformis, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20358..20828)
DNA (471bp) protein (157aa)
FlgN n=1 Tax=Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849) RepID=Q2Y9F2_NITMU
FlgN; K02399 flagella synthesis protein FlgN
FlgN {ECO:0000313|EMBL:ABB74619.1}; TaxID=323848 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849).;"
scnpilot_solids1_trim150_scaffold_29_24
Nitrosospira multiformis, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20836..21174)
DNA (339bp) protein (113aa)
Anti-sigma-28 factor, FlgM n=1 Tax=Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849) RepID=Q2Y9F1_NITMU
anti-sigma-28 factor FlgM; K02398 negative regulator of flagellin synthesis FlgM
Anti-sigma-28 factor, FlgM {ECO:0000313|EMBL:ABB74620.1}; TaxID=323848 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849).;"
scnpilot_solids1_trim150_scaffold_29_25
Nitrosospira multiformis, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21363..22109)
DNA (747bp) protein (249aa)
Flagellar protein FlgA n=1 Tax=Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849) RepID=Q2Y9F0_NITMU rbh
flageller protein FlgA; K02386 flagella basal body P-ring formation protein FlgA rbh
Flagella basal body P-ring formation protein FlgA {ECO:0000256|RuleBase:RU362063}; Flags: Precursor;; TaxID=323848 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849).;"
scnpilot_solids1_trim150_scaffold_29_26
Nitrosospira multiformis, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22495..22899
DNA (405bp) protein (135aa)
Flagellar basal body rod protein FlgB n=1 Tax=Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849) RepID=Q2Y9E7_NITMU
flagellar basal-body rod protein FlgB; K02387 flagellar basal-body rod protein FlgB
Flagellar basal body rod protein FlgB {ECO:0000256|PIRNR:PIRNR002889}; TaxID=323848 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849).;"
scnpilot_solids1_trim150_scaffold_29_27
Nitrosospira multiformis, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22914..23333
DNA (420bp) protein (140aa)
Flagellar basal-body rod protein FlgC n=1 Tax=Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849) RepID=Q2Y9E6_NITMU
flagellar basal-body rod protein FlgC; K02388 flagellar basal-body rod protein FlgC
Flagellar basal-body rod protein FlgC {ECO:0000256|RuleBase:RU362062}; TaxID=323848 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849).;"
scnpilot_solids1_trim150_scaffold_29_28
Nitrosospira multiformis, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23343..24011
DNA (669bp) protein (223aa)
Flagellar hook capping protein n=1 Tax=Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849) RepID=Q2Y9E5_NITMU rbh
flgD; flagellar basal body rod modification protein; K02389 flagellar basal-body rod modification protein FlgD rbh
Flagellar hook capping protein {ECO:0000313|EMBL:ABB74626.1}; TaxID=323848 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849).;"
scnpilot_solids1_trim150_scaffold_29_29
Nitrosospira multiformis, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24125..25345
DNA (1221bp) protein (407aa)
Uncharacterized protein n=1 Tax=Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849) RepID=Q2Y9E4_NITMU rbh
flgE; flagellar hook protein FlgE; K02390 flagellar hook protein FlgE rbh
Uncharacterized protein {ECO:0000313|EMBL:ABB74627.1}; TaxID=323848 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849).;"
Displaying items 1-30 of 195 in total

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