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scnpilot_solids1_trim150_scaffold_47

Search features with annotation key words

Displaying items 1-30 of 162 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_solids1_trim150_scaffold_47_1
R_Burkholderiales_63_240, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(158..475)
DNA (318bp) protein (106aa)
SMR n=6 Tax=Gammaproteobacteria RepID=F2WU97_KLEPN
multidrug transporter
Tax=RIFCSPHIGHO2_01_FULL_Burkholderiales_63_240_curated
scnpilot_solids1_trim150_scaffold_47_2
Nitrosospira multiformis, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

691..1782
DNA (1092bp) protein (364aa)
spermidine/putrescine ABC transporter ATP-binding subunit; K11072 spermidine/putrescine transport system ATP-binding protein [EC:3.6.3.31] rbh
Spermidine/putrescine import ATP-binding protein PotA {ECO:0000255|HAMAP-Rule:MF_01726}; EC=3.6.3.31 {ECO:0000255|HAMAP-Rule:MF_01726};; TaxID=323848 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849).;"
Spermidine/putrescine import ATP-binding protein PotA n=1 Tax=Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849) RepID=POTA_NITMU rbh
scnpilot_solids1_trim150_scaffold_47_3
Nitrosospira multiformis, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1794..2693
DNA (900bp) protein (300aa)
Binding-protein-dependent transport systems inner membrane component n=1 Tax=Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849) RepID=Q2YAD7_NITMU rbh
binding-protein dependent transport system inner membrane protein; K11071 spermidine/putrescine transport system permease protein rbh
Binding-protein-dependent transport systems inner membrane component {ECO:0000313|EMBL:ABB74284.1}; TaxID=323848 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849).;"
scnpilot_solids1_trim150_scaffold_47_4
Nitrosospira multiformis, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2695..3510
DNA (816bp) protein (272aa)
Binding-protein-dependent transport systems inner membrane component n=1 Tax=Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849) RepID=Q2YAD8_NITMU rbh
binding-protein dependent transport system inner membrane protein; K11070 spermidine/putrescine transport system permease protein rbh
Binding-protein-dependent transport systems inner membrane component {ECO:0000313|EMBL:ABB74283.1}; TaxID=323848 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849).;"
scnpilot_solids1_trim150_scaffold_47_5
Nitrosospira multiformis, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3507..4610
DNA (1104bp) protein (368aa)
Putrescine-binding periplasmic protein n=1 Tax=Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849) RepID=Q2YAD9_NITMU rbh
extracellular solute-binding protein; K11069 spermidine/putrescine transport system substrate-binding protein rbh
Putrescine-binding periplasmic protein {ECO:0000256|PIRNR:PIRNR019574}; Flags: Precursor;; TaxID=323848 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849).;"
scnpilot_solids1_trim150_scaffold_47_6
Nitrosospira multiformis, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4649..4960
DNA (312bp) protein (104aa)
Putative ferredoxin 2fe-2s protein n=1 Tax=Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849) RepID=Q2YAE0_NITMU
putative ferredoxin 2fe-2s protein
Putative ferredoxin 2fe-2s protein {ECO:0000313|EMBL:ABB74281.1}; TaxID=323848 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849).;"
scnpilot_solids1_trim150_scaffold_47_7
Nitrosospira multiformis, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5010..5696
DNA (687bp) protein (229aa)
Esterase/lipase/thioesterase family active site protein n=1 Tax=Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849) RepID=Q2YAE1_NITMU rbh
esterase/lipase/thioesterase family protein; K07018 rbh
Esterase/lipase/thioesterase family active site protein {ECO:0000313|EMBL:ABB74280.1}; TaxID=323848 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849).;"
scnpilot_solids1_trim150_scaffold_47_8
Nitrosospira multiformis, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5971..6486)
DNA (516bp) protein (172aa)
Uncharacterized protein n=1 Tax=Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849) RepID=Q2YAE2_NITMU
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABB74279.1}; Flags: Precursor;; TaxID=323848 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849).;"
scnpilot_solids1_trim150_scaffold_47_9
Nitrosospira multiformis, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6808..7083
DNA (276bp) protein (92aa)
Uncharacterized protein n=1 Tax=Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849) RepID=Q2YAE3_NITMU
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABB74278.1}; TaxID=323848 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849).;"
scnpilot_solids1_trim150_scaffold_47_10
Nitrosospira lacus, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7099..7218
DNA (120bp) protein (40aa)
Uncharacterized protein n=1 Tax=Nitrosospira sp. APG3 RepID=M5DK75_9PROT
Uncharacterized protein {ECO:0000313|EMBL:CCU63224.1}; TaxID=1288494 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira lacus.;"
scnpilot_solids1_trim150_scaffold_47_11
Nitrosospira multiformis, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7269..10358)
DNA (3090bp) protein (1030aa)
Glycosyl transferase, family 51 n=1 Tax=Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849) RepID=Q2YAE4_NITMU rbh
Glycosyl transferase, family 51 {ECO:0000313|EMBL:ABB74277.1}; Flags: Precursor;; TaxID=323848 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849).;"
glycosyl transferase family protein rbh
scnpilot_solids1_trim150_scaffold_47_12
unknown

Not on your lists

comp(10740..10868)
DNA (129bp) protein (43aa)

This feature has no annotations

scnpilot_solids1_trim150_scaffold_47_13
Nitrosospira multiformis, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10955..12886
DNA (1932bp) protein (644aa)
TonB-dependent receptor n=1 Tax=Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849) RepID=Q2YAE5_NITMU rbh
TonB-dependent receptor {ECO:0000313|EMBL:ABB74276.1}; Flags: Precursor;; TaxID=323848 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849).;"
TonB-dependent receptor; K02014 iron complex outermembrane recepter protein rbh
scnpilot_solids1_trim150_scaffold_47_14
Nitrosospira multiformis, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12925..14097
DNA (1173bp) protein (391aa)
UBA/THIF-type NAD/FAD binding fold protein n=1 Tax=Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849) RepID=Q2YAE6_NITMU rbh
UBA/THIF-type NAD/FAD binding domain-containing protein; K11996 adenylyltransferase and sulfurtransferase rbh
UBA/THIF-type NAD/FAD binding fold protein {ECO:0000313|EMBL:ABB74275.1}; TaxID=323848 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849).;"
scnpilot_solids1_trim150_scaffold_47_15
Nitrosospira multiformis, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14276..14728
DNA (453bp) protein (151aa)
Mov34/MPN/PAD-1 n=1 Tax=Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849) RepID=Q2YAE7_NITMU
Mov34/MPN/PAD-1
Mov34/MPN/PAD-1 {ECO:0000313|EMBL:ABB74274.1}; TaxID=323848 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849).;"
scnpilot_solids1_trim150_scaffold_47_16
Nitrosospira multiformis, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14980..15252
DNA (273bp) protein (91aa)
Molybdopterin synthase subunit MoaD n=1 Tax=Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849) RepID=Q2YAE8_NITMU
sulfur transfer protein ThiS
Molybdopterin synthase subunit MoaD {ECO:0000313|EMBL:ABB74273.1}; TaxID=323848 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849).;"
scnpilot_solids1_trim150_scaffold_47_17
Nitrosospira multiformis, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15282..17213
DNA (1932bp) protein (644aa)
L-carnitine dehydratase/bile acid-inducible protein F n=1 Tax=Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849) RepID=Q2YAE9_NITMU rbh
L-carnitine dehydratase/bile acid-inducible protein F {ECO:0000313|EMBL:ABB74272.1}; TaxID=323848 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849).;"
L-carnitine dehydratase/bile acid-inducible protein F rbh
scnpilot_solids1_trim150_scaffold_47_18
Nitrosospira multiformis, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17210..18874
DNA (1665bp) protein (555aa)
AMP-dependent synthetase and ligase; K12507 acyl-CoA synthetase [EC:6.2.1.-] rbh
AMP-dependent synthetase and ligase n=1 Tax=Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849) RepID=Q2YAF0_NITMU rbh
AMP-dependent synthetase and ligase {ECO:0000313|EMBL:ABB74271.1}; TaxID=323848 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849).;"
scnpilot_solids1_trim150_scaffold_47_19
Nitrosospira multiformis, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18862..20085
DNA (1224bp) protein (408aa)
acyl-CoA dehydrogenase-like protein; K00249 acyl-CoA dehydrogenase [EC:1.3.99.3] rbh
Acyl-CoA dehydrogenase-like protein n=1 Tax=Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849) RepID=Q2YAF1_NITMU rbh
Acyl-CoA dehydrogenase-like protein {ECO:0000313|EMBL:ABB74270.1}; Flags: Precursor;; TaxID=323848 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849).;"
scnpilot_solids1_trim150_scaffold_47_20
Nitrosospira multiformis, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20078..21298
DNA (1221bp) protein (407aa)
Major facilitator superfamily MFS_1 n=1 Tax=Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849) RepID=Q2YAF2_NITMU rbh
major facilitator transporter rbh
Major facilitator superfamily MFS_1 {ECO:0000313|EMBL:ABB74269.1}; Flags: Precursor;; TaxID=323848 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849).;"
scnpilot_solids1_trim150_scaffold_47_21
Nitrosospira multiformis, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21461..22903
DNA (1443bp) protein (481aa)
Uncharacterized protein n=1 Tax=Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849) RepID=Q2YAF3_NITMU rbh
hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:ABB74268.1}; TaxID=323848 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849).;"
scnpilot_solids1_trim150_scaffold_47_22
Nitrosospira multiformis, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22930..24081
DNA (1152bp) protein (384aa)
Possible unsaturated glucuronyl hydrolase n=1 Tax=Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849) RepID=Q2YAF4_NITMU rbh
unsaturated glucuronyl hydrolase rbh
Possible unsaturated glucuronyl hydrolase {ECO:0000313|EMBL:ABB74267.1}; TaxID=323848 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849).;"
scnpilot_solids1_trim150_scaffold_47_23
Nitrosospira multiformis, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24147..25541
DNA (1395bp) protein (465aa)
Pro-Hyp dipeptidase, Metallo peptidase, MEROPS family M38 n=1 Tax=Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849) RepID=Q2YAF5_NITMU rbh
amidohydrolase rbh
Pro-Hyp dipeptidase, Metallo peptidase, MEROPS family M38 {ECO:0000313|EMBL:ABB74266.1}; Flags: Precursor;; TaxID=323848 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849).;"
scnpilot_solids1_trim150_scaffold_47_24
Nitrosospira multiformis, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

25685..25990
DNA (306bp) protein (102aa)
Cytochrome c, class I n=1 Tax=Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849) RepID=Q2YAF6_NITMU
cytochrome c, class I
Cytochrome c, class I {ECO:0000313|EMBL:ABB74265.1}; Flags: Precursor;; TaxID=323848 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849).;"
scnpilot_solids1_trim150_scaffold_47_25
Nitrosospira multiformis, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

26233..28650
DNA (2418bp) protein (806aa)
Penicillin amidase {ECO:0000313|EMBL:ABB74264.1}; EC=3.5.1.11 {ECO:0000313|EMBL:ABB74264.1};; Flags: Precursor;; TaxID=323848 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849).;"
penicillin amidase (EC:3.5.1.11); K01434 penicillin amidase [EC:3.5.1.11] rbh
Penicillin amidase n=1 Tax=Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849) RepID=Q2YAF7_NITMU rbh
scnpilot_solids1_trim150_scaffold_47_26
Nitrosospira sp. NpAV, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(28709..31885)
DNA (3177bp) protein (1059aa)
RND efflux system, inner membrane transporter CmeB n=1 Tax=Burkholderia cenocepacia H111 RepID=G7HJU2_9BURK rbh
Transporter {ECO:0000313|EMBL:KIO48145.1}; TaxID=58133 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira sp. NpAV.;"
putative quinoxaline efflux system transporter protein rbh
scnpilot_solids1_trim150_scaffold_47_27
Nitrosospira sp. NpAV, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(31907..33022)
DNA (1116bp) protein (372aa)
Multidrug efflux transporter, membrane fusion protein n=1 Tax=Candidatus Nitrospira defluvii RepID=D8PHC3_9BACT rbh
Acriflavin resistance protein AcrA {ECO:0000313|EMBL:KIO48253.1}; TaxID=58133 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira sp. NpAV.;"
multidrug efflux transporter, membrane fusion protein rbh
scnpilot_solids1_trim150_scaffold_47_28
unknown

Not on your lists

33164..33259
DNA (96bp) protein (32aa)

This feature has no annotations

scnpilot_solids1_trim150_scaffold_47_29
RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_58_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(35987..36277)
DNA (291bp) protein (97aa)
CRISPR-associated protein Cas2 n=1 Tax=Candidatus Nitrospira defluvii RepID=D8PDH9_9BACT
cas2; CRISPR-associated protein Cas2
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_58_curated
scnpilot_solids1_trim150_scaffold_47_30

Not on your lists

comp(36258..37178)
DNA (921bp) protein (307aa)
Uncharacterized protein n=1 Tax=mine drainage metagenome RepID=E6QU45_9ZZZZ rbh
Uncharacterized protein {ECO:0000313|EMBL:CBI10767.1}; TaxID=410659 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine drainage metagenome.;"
cas1; CRISPR-associated protein Cas1; K15342 CRISP-associated protein Cas1
Displaying items 1-30 of 162 in total

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