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scnpilot_solids1_trim150_scaffold_54

Search features with annotation key words

Displaying items 1-30 of 129 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_solids1_trim150_scaffold_54_1
Achromobacter piechaudii, Achromobacter, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1..534)
DNA (534bp) protein (178aa)
Phage prohead protease, HK97 family {ECO:0000313|EMBL:EFF76880.1}; EC=3.4.-.- {ECO:0000313|EMBL:EFF76880.1};; TaxID=742159 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Achromobacter.;" source="Achromobacter piechaudii ATCC 43553.;"
Phage prohead protease, HK97 family n=1 Tax=Achromobacter piechaudii ATCC 43553 RepID=D4X8L2_9BURK
HK97 family phage prohead protease; K06904
scnpilot_solids1_trim150_scaffold_54_2
Alicycliphilus sp. B1, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(548..1777)
DNA (1230bp) protein (410aa)
Putative phage-related protein n=1 Tax=Pseudomonas aeruginosa (strain PA7) RepID=A6VBQ1_PSEA7 rbh
Putative phage-related protein {ECO:0000313|EMBL:GAO22183.1}; TaxID=1603291 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus sp. B1.;"
putative phage-like protein rbh
scnpilot_solids1_trim150_scaffold_54_3
Nitrosospira lacus, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2209..2625)
DNA (417bp) protein (139aa)
Uncharacterized protein n=1 Tax=Nitrosospira sp. APG3 RepID=M5DJG5_9PROT
Uncharacterized protein {ECO:0000313|EMBL:CCU62638.1}; TaxID=1288494 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira lacus.;"
scnpilot_solids1_trim150_scaffold_54_4
RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_14_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2622..3215)
DNA (594bp) protein (198aa)
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_14_curated
scnpilot_solids1_trim150_scaffold_54_5
unknown

Not on your lists

comp(3215..3478)
DNA (264bp) protein (88aa)

This feature has no annotations

scnpilot_solids1_trim150_scaffold_54_6
unknown

Not on your lists

comp(3475..3843)
DNA (369bp) protein (123aa)

This feature has no annotations

scnpilot_solids1_trim150_scaffold_54_7
unknown

Not on your lists

comp(4119..4325)
DNA (207bp) protein (69aa)

This feature has no annotations

scnpilot_solids1_trim150_scaffold_54_8
Ralstonia pickettii, Ralstonia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5290..6498)
DNA (1209bp) protein (403aa)
Integrase family protein n=1 Tax=Ralstonia pickettii (strain 12D) RepID=C6BGN9_RALP1 rbh
integrase family protein rbh
Integrase family protein {ECO:0000313|EMBL:ACS64389.1}; TaxID=428406 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Ralstonia.;" source="Ralstonia pickettii (strain 12D).;"
scnpilot_solids1_trim150_scaffold_54_trna_3
unknown

Not on your lists

comp(6680..6752)
DNA (73bp)
transferRNA Ala
scnpilot_solids1_trim150_scaffold_54_9
Nitrosospira multiformis, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6837..7736)
DNA (900bp) protein (300aa)
coproporphyrinogen III oxidase (EC:1.3.3.3); K00228 coproporphyrinogen III oxidase [EC:1.3.3.3] rbh
Oxygen-dependent coproporphyrinogen-III oxidase {ECO:0000256|HAMAP-Rule:MF_00333}; Short=CPO {ECO:0000256|HAMAP-Rule:MF_00333};; Short=Coprogen oxidase {ECO:0000256|HAMAP-Rule:MF_00333};; Short=Coproporphyrinogenase {ECO:0000256|HAMAP-Rule:MF_00333};; EC=1.3.3.3 {ECO:0000256|HAMAP-Rule:MF_00333};; TaxID=323848 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849).;"
Coproporphyrinogen-III oxidase, aerobic n=1 Tax=Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849) RepID=Q2YCS7_NITMU rbh
scnpilot_solids1_trim150_scaffold_54_10
Nitrosospira multiformis, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7794..9110)
DNA (1317bp) protein (439aa)
phosphoribosylamine--glycine ligase (EC:6.3.4.13); K01945 phosphoribosylamine--glycine ligase [EC:6.3.4.13] rbh
Phosphoribosylamine--glycine ligase {ECO:0000256|HAMAP-Rule:MF_00138}; EC=6.3.4.13 {ECO:0000256|HAMAP-Rule:MF_00138};; GARS {ECO:0000256|HAMAP-Rule:MF_00138}; Glycinamide ribonucleotide synthetase {ECO:0000256|HAMAP-Rule:MF_00138}; Phosphoribosylglycinamide synthetase {ECO:0000256|HAMAP-Rule:MF_00138}; TaxID=323848 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849).;"
Phosphoribosylamine--glycine ligase n=1 Tax=Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849) RepID=Q2YCS8_NITMU rbh
scnpilot_solids1_trim150_scaffold_54_11
Nitrosospira multiformis, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9324..10898)
DNA (1575bp) protein (525aa)
purH; bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase (EC:2.1.2.3); K00602 phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase [EC:2.1.2.3 3.5.4.10] rbh
Bifunctional purine biosynthesis protein PurH n=1 Tax=Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849) RepID=Q2YCS9_NITMU rbh
Bifunctional purine biosynthesis protein PurH {ECO:0000256|HAMAP-Rule:MF_00139, ECO:0000256|SAAS:SAAS00010516}; TaxID=323848 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849).;"
scnpilot_solids1_trim150_scaffold_54_12
Nitrosospira multiformis, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11007..11249)
DNA (243bp) protein (81aa)
DNA-binding protein Fis n=1 Tax=Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849) RepID=Q2YCT0_NITMU
Fis family transcriptional regulator; K03557 Fis family transcriptional regulator, factor for inversion stimulation protein
DNA-binding protein Fis {ECO:0000313|EMBL:ABB73441.1}; TaxID=323848 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849).;"
scnpilot_solids1_trim150_scaffold_54_13
Nitrosospira multiformis, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11246..12259)
DNA (1014bp) protein (338aa)
dihydrouridine synthase TIM-barrel protein nifR3; K05540 tRNA-dihydrouridine synthase B [EC:1.-.-.-] rbh
tRNA-dihydrouridine synthase {ECO:0000256|PIRNR:PIRNR006621}; EC=1.-.-.- {ECO:0000256|PIRNR:PIRNR006621};; TaxID=323848 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849).;"
tRNA-dihydrouridine synthase n=1 Tax=Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849) RepID=Q2YCT1_NITMU rbh
scnpilot_solids1_trim150_scaffold_54_14
Nitrosospira multiformis, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12581..13888)
DNA (1308bp) protein (436aa)
UbiH/UbiF/VisC/COQ6 family ubiquinone biosynthesis hydroxylase; K03185 2-octaprenyl-6-methoxyphenol hydroxylase [EC:1.14.13.-] rbh
2-octaprenyl-6-methoxyphenol hydroxylase {ECO:0000313|EMBL:ABB73439.1}; EC=1.14.13.- {ECO:0000313|EMBL:ABB73439.1};; TaxID=323848 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849).;"
2-octaprenyl-6-methoxyphenol hydroxylase n=1 Tax=Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849) RepID=Q2YCT2_NITMU rbh
scnpilot_solids1_trim150_scaffold_54_15
Nitrosospira multiformis, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13944..14297)
DNA (354bp) protein (118aa)
Uncharacterized protein n=1 Tax=Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849) RepID=Q2YCT3_NITMU
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABB73438.1}; TaxID=323848 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849).;"
scnpilot_solids1_trim150_scaffold_54_16
Nitrosospira multiformis, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14297..15619)
DNA (1323bp) protein (441aa)
peptidase M24; K01262 Xaa-Pro aminopeptidase [EC:3.4.11.9] rbh
Aminopeptidase P, Metallo peptidase, MEROPS family M24B {ECO:0000313|EMBL:ABB73437.1}; EC=3.4.11.9 {ECO:0000313|EMBL:ABB73437.1};; TaxID=323848 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849).;"
Aminopeptidase P, Metallo peptidase, MEROPS family M24B n=1 Tax=Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849) RepID=Q2YCT4_NITMU rbh
scnpilot_solids1_trim150_scaffold_54_17
Nitrosospira multiformis, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15803..16486)
DNA (684bp) protein (228aa)
Nucleotidyl transferase n=1 Tax=Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849) RepID=Q2YCT5_NITMU rbh
nucleotidyl transferase rbh
Nucleotidyl transferase {ECO:0000313|EMBL:ABB73436.1}; TaxID=323848 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849).;"
scnpilot_solids1_trim150_scaffold_54_18
Nitrosospira multiformis, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16542..17576)
DNA (1035bp) protein (345aa)
Aminoglycoside phosphotransferase n=1 Tax=Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849) RepID=Q2YCT6_NITMU rbh
aminoglycoside phosphotransferase; K07102 rbh
Aminoglycoside phosphotransferase {ECO:0000313|EMBL:ABB73435.1}; TaxID=323848 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849).;"
scnpilot_solids1_trim150_scaffold_54_19
Nitrosospira multiformis, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17673..17975
DNA (303bp) protein (101aa)
Uncharacterized protein n=1 Tax=Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849) RepID=Q2YCT7_NITMU
hypothetical protein; K09806 hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABB73434.1}; TaxID=323848 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849).;"
scnpilot_solids1_trim150_scaffold_54_20
Nitrosospira lacus, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18089..19618
DNA (1530bp) protein (510aa)
MG(2+) CHELATASE FAMILY PROTEIN / ComM-related protein n=1 Tax=Nitrosospira sp. APG3 RepID=M5DGI4_9PROT rbh
MG(2+) CHELATASE FAMILY PROTEIN / ComM-related protein {ECO:0000313|EMBL:CCU61594.1}; TaxID=1288494 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira lacus.;"
Mg chelatase subunit ChlI; K07391 magnesium chelatase family protein rbh
scnpilot_solids1_trim150_scaffold_54_21
Nitrosospira multiformis, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19734..20975)
DNA (1242bp) protein (414aa)
Uncharacterized protein n=1 Tax=Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849) RepID=Q2YD32_NITMU rbh
hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:ABB73339.1}; TaxID=323848 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849).;"
scnpilot_solids1_trim150_scaffold_54_22
Nitrosospira multiformis, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21149..22561)
DNA (1413bp) protein (471aa)
Sel1-like repeat n=1 Tax=Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849) RepID=Q2YCV8_NITMU rbh
Sel1 repeat-containing protein; K07126 rbh
Sel1-like repeat {ECO:0000313|EMBL:ABB73413.1}; Flags: Precursor;; TaxID=323848 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849).;"
scnpilot_solids1_trim150_scaffold_54_23
Nitrosospira multiformis, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22812..23321)
DNA (510bp) protein (170aa)
Uncharacterized protein n=1 Tax=Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849) RepID=Q2YCV9_NITMU
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABB73412.1}; Flags: Precursor;; TaxID=323848 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849).;"
scnpilot_solids1_trim150_scaffold_54_24
Nitrosospira multiformis, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23466..24254
DNA (789bp) protein (263aa)
spermidine synthase (EC:2.5.1.16); K00797 spermidine synthase [EC:2.5.1.16] rbh
Spermine synthase n=1 Tax=Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849) RepID=Q2YCW0_NITMU rbh
Spermine synthase {ECO:0000313|EMBL:ABB73411.1}; TaxID=323848 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849).;"
scnpilot_solids1_trim150_scaffold_54_25
Nitrosospira multiformis, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24913..25248)
DNA (336bp) protein (112aa)
Transcriptional regulator, XRE family n=1 Tax=Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849) RepID=Q2YCU4_NITMU
XRE family transcriptional regulator
Transcriptional regulator, XRE family {ECO:0000313|EMBL:ABB73427.1}; TaxID=323848 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849).;"
scnpilot_solids1_trim150_scaffold_54_26
Nitrosospira multiformis, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(25285..25488)
DNA (204bp) protein (68aa)
Uncharacterized protein n=1 Tax=Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849) RepID=Q2YCU5_NITMU
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABB73426.1}; TaxID=323848 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849).;"
scnpilot_solids1_trim150_scaffold_54_27
unknown

Not on your lists

comp(25583..25792)
DNA (210bp) protein (70aa)

This feature has no annotations

scnpilot_solids1_trim150_scaffold_54_28
Nitrosospira sp. NpAV, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

25950..27566
DNA (1617bp) protein (539aa)
Glycerone kinase (EC:2.7.1.29); K00863 dihydroxyacetone kinase [EC:2.7.1.29] rbh
Glycerone kinase n=1 Tax=Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849) RepID=Q2Y5F8_NITMU rbh
Dihydroxyacetone kinase {ECO:0000313|EMBL:KIO49461.1}; TaxID=58133 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira sp. NpAV.;"
scnpilot_solids1_trim150_scaffold_54_29
Nitrosospira multiformis, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

28015..28203
DNA (189bp) protein (63aa)
Uncharacterized protein n=1 Tax=Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849) RepID=Q2YCW3_NITMU
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABB73408.1}; TaxID=323848 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849).;"
Displaying items 1-30 of 129 in total

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