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scnpilot_solids1_trim150_scaffold_211

Search features with annotation key words

Displaying items 1-30 of 60 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_solids1_trim150_scaffold_211_1
Burkholderia cenocepacia, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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80..475
DNA (396bp) protein (132aa)
Phage terminase, small subunit, , P27 family n=1 Tax=Burkholderia cenocepacia (strain MC0-3) RepID=B1JZH0_BURCC
P27 family phage terminase small subunit
Phage terminase, small subunit, , P27 family {ECO:0000313|EMBL:ACA90463.1}; TaxID=406425 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia; Burkholderia cepacia complex.;" source="Burkholderia cenocepacia (strain MC0-3).;"
scnpilot_solids1_trim150_scaffold_211_2
Burkholderia cenocepacia, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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444..1088
DNA (645bp) protein (215aa)
Terminase n=1 Tax=Burkholderia cenocepacia (strain MC0-3) RepID=B1JZH1_BURCC
terminase
Terminase {ECO:0000313|EMBL:ACA90464.1}; TaxID=406425 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia; Burkholderia cepacia complex.;" source="Burkholderia cenocepacia (strain MC0-3).;"
scnpilot_solids1_trim150_scaffold_211_3
Burkholderia cenocepacia, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1166..1951
DNA (786bp) protein (262aa)
Terminase n=1 Tax=Burkholderia cenocepacia (strain MC0-3) RepID=B1JZH1_BURCC
terminase
Terminase {ECO:0000313|EMBL:ACA90464.1}; TaxID=406425 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia; Burkholderia cepacia complex.;" source="Burkholderia cenocepacia (strain MC0-3).;"
scnpilot_solids1_trim150_scaffold_211_4
unknown

Not on your lists

comp(1781..2155)
DNA (375bp) protein (125aa)

This feature has no annotations

scnpilot_solids1_trim150_scaffold_211_5
Nitrosomonas europaea, Nitrosomonas, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(2464..2754)
DNA (291bp) protein (97aa)
Transposase IS4 family n=1 Tax=Nitrosomonas europaea (strain ATCC 19718 / NBRC 14298) RepID=Q81ZL5_NITEU
IS4 family transposase
Transposase IS4 family {ECO:0000313|EMBL:CAD85433.1}; TaxID=228410 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosomonas.;" source="Nitrosomonas europaea (strain ATCC 19718 / NBRC 14298).;"
scnpilot_solids1_trim150_scaffold_211_6
Nitrosomonas europaea, Nitrosomonas, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(2754..3236)
DNA (483bp) protein (161aa)
Possible transposase n=1 Tax=Nitrosomonas europaea (strain ATCC 19718 / NBRC 14298) RepID=Q82UD8_NITEU
transposase
Possible transposase {ECO:0000313|EMBL:CAD85464.1}; TaxID=228410 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosomonas.;" source="Nitrosomonas europaea (strain ATCC 19718 / NBRC 14298).;"
scnpilot_solids1_trim150_scaffold_211_7
BJP_08E140C01_10KDA_Burkholderiales_65_51, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3811..4827)
DNA (1017bp) protein (339aa)
ornithine cyclodeaminase (EC:4.3.1.12); K01750 ornithine cyclodeaminase [EC:4.3.1.12] rbh
Ornithine cyclodeaminase n=1 Tax=Leptothrix cholodnii (strain ATCC 51168 / LMG 8142 / SP-6) RepID=B1Y7V6_LEPCP rbh
Tax=BJP_08E140C01_10KDA_Burkholderiales_65_51
scnpilot_solids1_trim150_scaffold_211_8
RIFOXYD12_FULL_Deltaproteobacteria_50_9_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5209..5451
DNA (243bp) protein (81aa)
cell filamentation protein Fic n=1 Tax=Uliginosibacterium gangwonense RepID=UPI000379219B
hypothetical protein
Tax=RIFOXYD12_FULL_Deltaproteobacteria_50_9_curated
scnpilot_solids1_trim150_scaffold_211_9
unknown

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5494..5631
DNA (138bp) protein (46aa)

This feature has no annotations

scnpilot_solids1_trim150_scaffold_211_10
gamma proteobacterium HdN1, Gammaproteobacteria, Proteobacteria, Bacteria

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5665..8304
DNA (2640bp) protein (880aa)
Predicted helicase n=1 Tax=gamma proteobacterium HdN1 RepID=E1VM54_9GAMM rbh
Predicted helicase {ECO:0000313|EMBL:CBL45896.1}; TaxID=83406 species="Bacteria; Proteobacteria; Gammaproteobacteria.;" source="gamma proteobacterium HdN1.;"
helicase rbh
scnpilot_solids1_trim150_scaffold_211_11
gamma proteobacterium HdN1, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8309..9241
DNA (933bp) protein (311aa)
Uncharacterized protein n=1 Tax=gamma proteobacterium HdN1 RepID=E1VM53_9GAMM rbh
hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:CBL45895.1}; TaxID=83406 species="Bacteria; Proteobacteria; Gammaproteobacteria.;" source="gamma proteobacterium HdN1.;"
scnpilot_solids1_trim150_scaffold_211_12
Nitrosospira multiformis, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9328..10062)
DNA (735bp) protein (245aa)
Uncharacterized protein n=1 Tax=Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849) RepID=Q2Y8E6_NITMU
Uncharacterized protein {ECO:0000313|EMBL:ABB74975.1}; Flags: Precursor;; TaxID=323848 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849).;"
hypothetical protein
scnpilot_solids1_trim150_scaffold_211_13
BJP_IG2103_SUB10_Xanthomonadales_61_45, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10427..10933
DNA (507bp) protein (169aa)
RelB protein n=1 Tax=Thauera sp. 28 RepID=N6ZFN5_9RHOO
RelB protein
Tax=BJP_IG2103_SUB10_Xanthomonadales_61_45
scnpilot_solids1_trim150_scaffold_211_14
R_Methylophilales_57_10, Methylophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10917..11186
DNA (270bp) protein (90aa)
Poison n=1 Tax=uncultured bacterium RepID=K1YY41_9BACT
putative toxin
Tax=RIFCSPHIGHO2_02_FULL_Methylophilales_57_10_curated
scnpilot_solids1_trim150_scaffold_211_15
Nitrosospira multiformis, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11362..12561
DNA (1200bp) protein (400aa)
Uncharacterized protein n=1 Tax=Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849) RepID=Q2YCS2_NITMU rbh
hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:ABB73449.1}; TaxID=323848 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849).;"
scnpilot_solids1_trim150_scaffold_211_16
Nitrosospira multiformis, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13121..15241)
DNA (2121bp) protein (707aa)
ATP-dependent endonuclease of the OLD family-like protein n=1 Tax=Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849) RepID=Q2YCR9_NITMU rbh
ATP-dependent endonuclease of the OLD family-like protein {ECO:0000313|EMBL:ABB73452.1}; TaxID=323848 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849).;"
ATP-dependent OLD family endonuclease rbh
scnpilot_solids1_trim150_scaffold_211_17
Nitrosospira multiformis, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15471..15914)
DNA (444bp) protein (148aa)
Cytidine/deoxycytidylate deaminase, zinc-binding region n=1 Tax=Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849) RepID=Q2YCR8_NITMU
cytidine/deoxycytidylate deaminase zinc-binding subunit
Cytidine/deoxycytidylate deaminase, zinc-binding region {ECO:0000313|EMBL:ABB73453.1}; TaxID=323848 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849).;"
scnpilot_solids1_trim150_scaffold_211_18
Nitrosospira multiformis, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16003..16737)
DNA (735bp) protein (245aa)
GCN5-related N-acetyltransferase n=1 Tax=Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849) RepID=Q2YCR7_NITMU rbh
GCN5-like N-acetyltransferase rbh
GCN5-related N-acetyltransferase {ECO:0000313|EMBL:ABB73454.1}; TaxID=323848 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849).;"
scnpilot_solids1_trim150_scaffold_211_19
Nitrosospira multiformis, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17025..17780
DNA (756bp) protein (252aa)
Uncharacterized protein n=1 Tax=Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849) RepID=Q2YCR6_NITMU rbh
hypothetical protein; K09122 hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:ABB73455.1}; TaxID=323848 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849).;"
scnpilot_solids1_trim150_scaffold_211_trna_1
unknown

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18022..18094
DNA (73bp)
transferRNA Lys
scnpilot_solids1_trim150_scaffold_211_20
unknown

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comp(18447..18620)
DNA (174bp) protein (58aa)

This feature has no annotations

scnpilot_solids1_trim150_scaffold_211_21
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18744..19832)
DNA (1089bp) protein (363aa)
Uncharacterized protein n=1 Tax=Delftia acidovorans CCUG 15835 RepID=S2XAT0_DELAC
Uncharacterized protein {ECO:0000313|EMBL:EPD42367.1}; TaxID=883100 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia acidovorans CCUG 15835.;"
hypothetical protein
scnpilot_solids1_trim150_scaffold_211_22
Aurantimonas manganoxydans, Aurantimonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20423..22192)
DNA (1770bp) protein (590aa)
Uncharacterized protein n=1 Tax=Manganese-oxidizing bacterium (strain SI85-9A1) RepID=Q1YK57_MOBAS rbh
Uncharacterized protein {ECO:0000313|EMBL:EAS50666.1}; TaxID=287752 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Aurantimonadaceae; Aurantimonas.;" source="Manganese-oxidizing bacterium (strain SI85-9A1).;"
hypothetical protein rbh
scnpilot_solids1_trim150_scaffold_211_23
Burkholderia jiangsuensis, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22470..22757
DNA (288bp) protein (96aa)
transposase ISRSO6 n=1 Tax=Burkholderia bryophila RepID=UPI00037CE002
Transposase {ECO:0000313|EMBL:KAK42489.1}; TaxID=1458357 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia.;" source="Burkholderia jiangsuensis.;"
transposase
scnpilot_solids1_trim150_scaffold_211_24
R_Betaproteobacteria_64_14, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22797..23237)
DNA (441bp) protein (147aa)
Tax=RIFCSPLOWO2_02_Betaproteobacteria_64_14_curated
scnpilot_solids1_trim150_scaffold_211_25
Burkholderia oklahomensis, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23268..24134)
DNA (867bp) protein (289aa)
exonuclease-like protein; K02342 DNA polymerase III subunit epsilon [EC:2.7.7.7] rbh
transposase n=2 Tax=Burkholderia oklahomensis RepID=UPI00016A85D0 rbh
Exonuclease family protein {ECO:0000313|EMBL:AIO66534.1}; TaxID=342113 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia; pseudomallei group.;" source="Burkholderia oklahomensis.;"
scnpilot_solids1_trim150_scaffold_211_26
unknown

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comp(24176..24583)
DNA (408bp) protein (136aa)

This feature has no annotations

scnpilot_solids1_trim150_scaffold_211_27
unknown

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comp(24927..25919)
DNA (993bp) protein (331aa)

This feature has no annotations

scnpilot_solids1_trim150_scaffold_211_28
unknown

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26051..26437
DNA (387bp) protein (129aa)

This feature has no annotations

scnpilot_solids1_trim150_scaffold_211_29
unknown

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26474..26719
DNA (246bp) protein (82aa)

This feature has no annotations

Displaying items 1-30 of 60 in total

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