ggKbase home page

scnpilot_solids1_trim150_scaffold_47_83

Organism: SCNPILOT_SOLID_1_TRIM150_Nitrosospira_54_27

near complete RP 51 / 55 BSCG 51 / 51 ASCG 14 / 38
Location: comp(95727..97154)

Top 3 Functional Annotations

Value Algorithm Source
hypothetical protein; K14415 tRNA-splicing ligase RtcB [EC:6.5.1.3] similarity KEGG
DB: KEGG
  • Identity: 94.3
  • Coverage: 475.0
  • Bit_score: 909
  • Evalue 3.20e-262
  • rbh
RNA-splicing ligase RtcB {ECO:0000256|RuleBase:RU371113}; EC=6.5.1.- {ECO:0000256|RuleBase:RU371113};; TaxID=323848 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 94.3
  • Coverage: 475.0
  • Bit_score: 909
  • Evalue 1.40e-261
RNA-splicing ligase RtcB n=1 Tax=Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849) RepID=Q2YAL5_NITMU similarity UNIREF
DB: UNIREF100
  • Identity: 94.3
  • Coverage: 475.0
  • Bit_score: 909
  • Evalue 1.00e-261
  • rbh

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Nitrosospira multiformis → Nitrosospira → Nitrosomonadales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1428
ATGAATCTGGAGCGACTGCGCCAACTGCAACCCTGCCTGTGGACGCTGCCGCGCACGCCAGGTGAAGAACGTGCGGAGGTCCTCCTGTATGGCGGTGCGCCCTTGCTCGTCAGCATGGACGACAAGGTACTCGAGCAGATCGCCAACGTAGCTTCTCTGCCGGGCCTGGTCGGAGCGGCAATGACCATGCCGGATGCACATTGGGGATATGGTTTTCCCATAGGGGGCGTTGCGGCTTTCGATGCTGAACAGGGGGGCGTCATTTCCGCAGGCGGAGTCGGCTTCGATATTTCGTGCGGTATTCGCTGTCTGCGCAGCAATCTCGATCTGGAGGATGCGGTAGAGTATTTTCCCGAACTCGGGAATGCCTTGTTCCGCGCCATCCCTGCCGGTGTGGGTGAGGAGGGCGAGATCAAGCTGAACCCGGAGCAGCTCGACCAGGTGATGCACGGCGGTGCACATTGGGCAGTGCAACAAGGCTACGGCACCGCAGCAGACCTGGAATATATTGAAGAACATGGGCGGATTGCGGAGGCTATCCCGGATAACGTATCCGAACTTGCCAAAAAGCGCCAGCGCGGGGAAATGGGGACGCTCGGCTCAGGCAATCATTATCTGGAAGTGCAGGTGGTGGACCGCATCTTCGATCCTGCTGCCGCGCTGGCGTTTGGCCTTTACGAAGGACAGATCCTGATTTCGATACATTGCGGTTCGCGAGGGCTGGGGCACCAGATCGGTACCGACTATCTGGTGCTATTGGCAAAAGCAGCCAACCGCCTGGGCATTCATTTACCCGATCGTGAACTTGCCTGTGCGCCTGTCAAATCCCCCGAAGGCCAGCAATACATTGGCGCGATGAATGCCGCAATTAATTGCGCGCTTGCCAACCGGCAAATCCTGACGCACCTTACGCGTTCTGTATTCATGGAAGTTTATCCCCAGGCCGCGCTTGAAACCTTGTTCGATGTTTCGCACAATACCTGCAAGGCCGAATCCCATCAGATCGACGGTGAATCAAGGTTGCTCTATGTGCACCGCAAGGGTGCCACACGTGCATTCGGGCCGGGACACCCCCTGCTGCCGGAACGCTACCGCCAGGTAGGACAACCCGTCGTTATCGGCGGAAGCATGGGAACAGGGTCCTACATTCTCGTTGGCGCCAGCGAAAACCCGGCCTTCGCCTCTTCGAGCCACGGCGCAGGTCGCGCCATGAGCCGGCATCAGGCGCTCGCGCGGTGGAAAGGACGCGCGCTGGTGGACGAGCTGGCGCAACAAGGTATCCTGATCCATACCCGCTCCATGCGCGGTGTGGCGGAAGAGGCTCCAGGCGCTTATAAGGATGTCGATCTGGTGGCGGAGGCCACGGAAGAAGCCGGGCTCGCCCGGCGAGTTGCATTTCTCCGGCCGAAAGTCTGCATCAAGGGTTAG
PROTEIN sequence
Length: 476
MNLERLRQLQPCLWTLPRTPGEERAEVLLYGGAPLLVSMDDKVLEQIANVASLPGLVGAAMTMPDAHWGYGFPIGGVAAFDAEQGGVISAGGVGFDISCGIRCLRSNLDLEDAVEYFPELGNALFRAIPAGVGEEGEIKLNPEQLDQVMHGGAHWAVQQGYGTAADLEYIEEHGRIAEAIPDNVSELAKKRQRGEMGTLGSGNHYLEVQVVDRIFDPAAALAFGLYEGQILISIHCGSRGLGHQIGTDYLVLLAKAANRLGIHLPDRELACAPVKSPEGQQYIGAMNAAINCALANRQILTHLTRSVFMEVYPQAALETLFDVSHNTCKAESHQIDGESRLLYVHRKGATRAFGPGHPLLPERYRQVGQPVVIGGSMGTGSYILVGASENPAFASSSHGAGRAMSRHQALARWKGRALVDELAQQGILIHTRSMRGVAEEAPGAYKDVDLVAEATEEAGLARRVAFLRPKVCIKG*