ggKbase home page

scnpilot_solids1_trim150_scaffold_234_3

Organism: SCNPILOT_SOLID_1_TRIM150_Nitrosospira_54_27

near complete RP 51 / 55 BSCG 51 / 51 ASCG 14 / 38
Location: comp(1794..2414)

Top 3 Functional Annotations

Value Algorithm Source
Transcriptional regulator, TetR family n=1 Tax=Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849) RepID=Q2Y845_NITMU similarity UNIREF
DB: UNIREF100
  • Identity: 91.3
  • Coverage: 206.0
  • Bit_score: 384
  • Evalue 8.40e-104
  • rbh
TetR family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 91.3
  • Coverage: 206.0
  • Bit_score: 384
  • Evalue 2.70e-104
  • rbh
Transcriptional regulator, TetR family {ECO:0000313|EMBL:ABB75076.1}; TaxID=323848 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 91.3
  • Coverage: 206.0
  • Bit_score: 384
  • Evalue 1.20e-103

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Nitrosospira multiformis → Nitrosospira → Nitrosomonadales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 621
ATGGCGACTGCTGATCAGATTATTGACACCGCAGTTGAGCTCGGCGAACAGAAATCGTGGGAGGCCGTACGCCTGCATGACGTAGCGGCTGCGCTGGGCATAACTCTGAACGACGTGCACACGCATTTTCGTGAGAAAGAGGATATCGTTGAAGCCTGGTTCGAGCGGGCGGACAGTGCGATGCTCAGGATGGCGCAGGCGCCGGACTTTTCCTTCCTGACGCCGCATCAGCGTCTGCACCGGCTGATCATGACCTGGCTGGCCTCTCTTTACCCTTACCGCAAGGCTACCAGGCAAATGATCTATGGCAAACTGGAGCCGGGCCACCTGCACGTTCAGATTCCCGGATTGATACGCGTCAGCCGTACCGTGCAATGGATGCGGGAGGCTGCGGGACGAGATGCTACGTATCTTCGGCGCGCGTTGGAAGAAAGTGCGCTCACTTCCATTTATCTGGCGACATTTGTCCACTGGATGAACGACAGTTCGTCCGGTTCTTCCAGGACGAGCCGGTTTCTGGACGGATGCCTTTCCGTAGGTGAAAACCTGAATCGGATGATATTTTCACGCCGGCACGGCAGAGAAAGAGCGGATAGTGGAGAAGCGCCCCAAGGTACATAA
PROTEIN sequence
Length: 207
MATADQIIDTAVELGEQKSWEAVRLHDVAAALGITLNDVHTHFREKEDIVEAWFERADSAMLRMAQAPDFSFLTPHQRLHRLIMTWLASLYPYRKATRQMIYGKLEPGHLHVQIPGLIRVSRTVQWMREAAGRDATYLRRALEESALTSIYLATFVHWMNDSSSGSSRTSRFLDGCLSVGENLNRMIFSRRHGRERADSGEAPQGT*