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scnpilot_solids1_trim150_scaffold_234

Search features with annotation key words

Displaying items 1-30 of 50 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_solids1_trim150_scaffold_234_1
Nitrosospira multiformis, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2..154)
DNA (153bp) protein (51aa)
cytochrome c oxidase subunit II; K02275 cytochrome c oxidase subunit II [EC:1.9.3.1]
Cytochrome c oxidase subunit 2; EC=1.9.3.1;; Flags: Precursor;; TaxID=323848 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849).;"
Cytochrome c oxidase subunit 2 n=1 Tax=Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849) RepID=Q2Y847_NITMU
scnpilot_solids1_trim150_scaffold_234_2
Nitrosococcus halophilus, Nitrosococcus, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(505..1584)
DNA (1080bp) protein (360aa)
Membrane-bound metal-dependent hydrolase n=1 Tax=Nitrosococcus halophilus (strain Nc4) RepID=D5C1D5_NITHN rbh
membrane-bound metal-dependent hydrolase; K09151 hypothetical protein rbh
Membrane-bound metal-dependent hydrolase {ECO:0000313|EMBL:ADE16487.1}; TaxID=472759 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Chromatiaceae; Nitrosococcus.;" source="Nitrosococcus halophilus (strain Nc4).;"
scnpilot_solids1_trim150_scaffold_234_3
Nitrosospira multiformis, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1794..2414)
DNA (621bp) protein (207aa)
Transcriptional regulator, TetR family n=1 Tax=Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849) RepID=Q2Y845_NITMU rbh
TetR family transcriptional regulator rbh
Transcriptional regulator, TetR family {ECO:0000313|EMBL:ABB75076.1}; TaxID=323848 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849).;"
scnpilot_solids1_trim150_scaffold_234_4
Nitrosospira multiformis, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2627..2875)
DNA (249bp) protein (83aa)
Glycosyltransferase n=1 Tax=Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849) RepID=Q2Y842_NITMU
glycosyltransferase
Glycosyltransferase {ECO:0000313|EMBL:ABB75079.1}; TaxID=323848 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849).;"
scnpilot_solids1_trim150_scaffold_234_5
Nitrosospira multiformis, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2936..3151)
DNA (216bp) protein (72aa)
Glycosyltransferase n=1 Tax=Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849) RepID=Q2Y842_NITMU
glycosyltransferase
Glycosyltransferase {ECO:0000313|EMBL:ABB75079.1}; TaxID=323848 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849).;"
scnpilot_solids1_trim150_scaffold_234_6
Nitrosospira multiformis, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3153..4157)
DNA (1005bp) protein (335aa)
Glycosyl transferase, family 9 n=1 Tax=Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849) RepID=Q2Y841_NITMU rbh
glycosyl transferase family protein rbh
Glycosyl transferase, family 9 {ECO:0000313|EMBL:ABB75080.1}; TaxID=323848 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849).;"
scnpilot_solids1_trim150_scaffold_234_7
Nitrosospira multiformis, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4442..4690
DNA (249bp) protein (83aa)
Phospholipid-binding protein, PBP family n=1 Tax=Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849) RepID=Q2Y840_NITMU
YbhB and YbcL; K06910
Phospholipid-binding protein, PBP family {ECO:0000313|EMBL:ABB75081.1}; TaxID=323848 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849).;"
scnpilot_solids1_trim150_scaffold_234_8
Nitrosospira multiformis, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5158..5562
DNA (405bp) protein (135aa)
Uncharacterized protein n=1 Tax=Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849) RepID=Q2Y839_NITMU
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABB75082.1}; TaxID=323848 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849).;"
scnpilot_solids1_trim150_scaffold_234_9
unknown

Not on your lists

5613..5861
DNA (249bp) protein (83aa)

This feature has no annotations

scnpilot_solids1_trim150_scaffold_234_10
Nitrosospira multiformis, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5812..6027)
DNA (216bp) protein (72aa)
Cold-shock DNA-binding protein family n=1 Tax=Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849) RepID=Q2Y9Y3_NITMU
cold-shock DNA-binding domain-containing protein; K03704 cold shock protein (beta-ribbon, CspA family)
Cold-shock DNA-binding protein family {ECO:0000313|EMBL:ABB74438.1}; TaxID=323848 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849).;"
scnpilot_solids1_trim150_scaffold_234_11
Candidatus Accumulibacter sp. BA-92, Candidatus Accumulibacter, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6224..6544
DNA (321bp) protein (107aa)
addiction module antitoxin n=1 Tax=Burkholderia sp. JPY347 RepID=UPI00036C6CBE
Antitoxin ParD4 {ECO:0000313|EMBL:EXI78374.1}; TaxID=1454003 species="Bacteria; Proteobacteria; Betaproteobacteria; Candidatus Accumulibacter.;" source="Candidatus Accumulibacter sp. BA-92.;"
addiction module antidote protein
scnpilot_solids1_trim150_scaffold_234_12
Nitrosospira multiformis, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6531..10622)
DNA (4092bp) protein (1364aa)
Uncharacterized protein n=1 Tax=Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849) RepID=Q2Y828_NITMU rbh
hypothetical protein; K09800 hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:ABB75093.1}; Flags: Precursor;; TaxID=323848 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849).;"
scnpilot_solids1_trim150_scaffold_234_13
Nitrosospira multiformis, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10629..12527)
DNA (1899bp) protein (633aa)
Surface antigen (D15) n=1 Tax=Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849) RepID=Q2Y827_NITMU rbh
Surface antigen (D15) {ECO:0000313|EMBL:ABB75094.1}; TaxID=323848 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849).;"
surface antigen (D15) rbh
scnpilot_solids1_trim150_scaffold_234_14
Nitrosospira multiformis, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12810..14684
DNA (1875bp) protein (625aa)
ATP-dependent metalloprotease FtsH (EC:3.6.4.6); K03798 cell division protease FtsH [EC:3.4.24.-] rbh
ATP-dependent zinc metalloprotease FtsH {ECO:0000256|HAMAP-Rule:MF_01458}; EC=3.4.24.- {ECO:0000256|HAMAP-Rule:MF_01458};; TaxID=323848 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849).;"
ATP-dependent zinc metalloprotease FtsH n=1 Tax=Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849) RepID=Q2Y826_NITMU rbh
scnpilot_solids1_trim150_scaffold_234_15
unknown

Not on your lists

comp(14993..15232)
DNA (240bp) protein (80aa)

This feature has no annotations

scnpilot_solids1_trim150_scaffold_234_16
Nitrosospira multiformis, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15271..16689
DNA (1419bp) protein (473aa)
DEAD/DEAH box helicase-like protein n=1 Tax=Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849) RepID=Q2Y825_NITMU rbh
DEAD/DEAH box helicase-like protein rbh
DEAD/DEAH box helicase-like protein {ECO:0000313|EMBL:ABB75096.1}; TaxID=323848 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849).;"
scnpilot_solids1_trim150_scaffold_234_17
Nitrosospira multiformis, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16851..17237)
DNA (387bp) protein (129aa)
Globin family protein n=1 Tax=Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849) RepID=Q2Y824_NITMU
globin family protein; K06886 hemoglobin
Globin family protein {ECO:0000313|EMBL:ABB75097.1}; TaxID=323848 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849).;"
scnpilot_solids1_trim150_scaffold_234_18
Nitrosospira multiformis, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17287..18057)
DNA (771bp) protein (257aa)
Uncharacterized protein n=1 Tax=Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849) RepID=Q2Y823_NITMU rbh
hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:ABB75098.1}; TaxID=323848 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849).;"
scnpilot_solids1_trim150_scaffold_234_19
Nitrosospira multiformis, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18281..18826
DNA (546bp) protein (182aa)
Alkyl hydroperoxide reductase/Thiol specific antioxidant/Mal allergen; K03564 peroxiredoxin Q/BCP [EC:1.11.1.15] rbh
Alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen n=1 Tax=Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849) RepID=Q2Y822_NITMU rbh
Alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen {ECO:0000313|EMBL:ABB75099.1}; Flags: Precursor;; TaxID=323848 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849).;"
scnpilot_solids1_trim150_scaffold_234_20
Nitrosospira multiformis, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18947..20305)
DNA (1359bp) protein (453aa)
DNA repair protein radA n=1 Tax=Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849) RepID=Q2Y821_NITMU rbh
DNA repair protein RadA; K04485 DNA repair protein RadA/Sms rbh
DNA repair protein radA {ECO:0000256|RuleBase:RU003555}; TaxID=323848 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849).;"
scnpilot_solids1_trim150_scaffold_234_21
Nitrosospira multiformis, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20432..21766)
DNA (1335bp) protein (445aa)
Ferredoxin-dependent glutamate synthase n=1 Tax=Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849) RepID=Q2Y820_NITMU rbh
ferredoxin-dependent glutamate synthase rbh
Ferredoxin-dependent glutamate synthase {ECO:0000313|EMBL:ABB75101.1}; TaxID=323848 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849).;"
scnpilot_solids1_trim150_scaffold_234_22
Nitrosospira multiformis, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21778..23493)
DNA (1716bp) protein (572aa)
Uncharacterized protein n=1 Tax=Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849) RepID=Q2Y819_NITMU rbh
Uncharacterized protein {ECO:0000313|EMBL:ABB75102.1}; Flags: Precursor;; TaxID=323848 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849).;"
hypothetical protein rbh
scnpilot_solids1_trim150_scaffold_234_23
Nitrosospira multiformis, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23983..25644
DNA (1662bp) protein (554aa)
Uncharacterized protein n=1 Tax=Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849) RepID=Q2Y817_NITMU rbh
hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:ABB75104.1}; TaxID=323848 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849).;"
scnpilot_solids1_trim150_scaffold_234_24
Nitrosospira multiformis, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

25717..26415
DNA (699bp) protein (233aa)
Pirin-like protein n=1 Tax=Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849) RepID=Q2Y816_NITMU rbh
pirin-like protein; K06911 rbh
Pirin-like protein {ECO:0000313|EMBL:ABB75105.1}; TaxID=323848 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849).;"
scnpilot_solids1_trim150_scaffold_234_25
Nitrosospira lacus, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(26592..27788)
DNA (1197bp) protein (399aa)
NnrS protein involved in response to NO n=1 Tax=Nitrosospira sp. APG3 RepID=M5DKT3_9PROT rbh
NnrS protein involved in response to NO {ECO:0000313|EMBL:CCU63193.1}; TaxID=1288494 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira lacus.;"
NnrS family protein; K07234 uncharacterized protein involved in response to NO rbh
scnpilot_solids1_trim150_scaffold_234_26
unknown

Not on your lists

27998..28237
DNA (240bp) protein (80aa)

This feature has no annotations

scnpilot_solids1_trim150_scaffold_234_27
Nitrosospira multiformis, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(28256..29704)
DNA (1449bp) protein (483aa)
hypothetical protein; K04075 tRNA(Ile)-lysidine synthase [EC:6.3.4.19] rbh
tRNA(Ile)-lysidine synthase {ECO:0000256|HAMAP-Rule:MF_01161, ECO:0000256|SAAS:SAAS00043109}; EC=6.3.4.19 {ECO:0000256|HAMAP-Rule:MF_01161, ECO:0000256|SAAS:SAAS00043112};; tRNA(Ile)-2-lysyl-cytidine synthase {ECO:0000256|HAMAP-Rule:MF_01161}; tRNA(Ile)-lysidine synthetase {ECO:0000256|HAMAP-Rule:MF_01161}; TaxID=323848 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849).;"
tRNA(Ile)-lysidine synthase n=1 Tax=Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849) RepID=Q2Y815_NITMU rbh
scnpilot_solids1_trim150_scaffold_234_28
Nitrosospira multiformis, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(29673..30641)
DNA (969bp) protein (323aa)
acetyl-CoA carboxylase, carboxyl transferase subunit alpha; K01962 acetyl-CoA carboxylase carboxyl transferase subunit alpha [EC:6.4.1.2] rbh
Acetyl-coenzyme A carboxylase carboxyl transferase subunit alpha {ECO:0000255|HAMAP-Rule:MF_00823}; Short=ACCase subunit alpha {ECO:0000255|HAMAP-Rule:MF_00823};; Short=Acetyl-CoA carboxylase carboxyltransferase subunit alpha {ECO:0000255|HAMAP-Rule:MF_00823};; EC=6.4.1.2 {ECO:0000255|HAMAP-Rule:MF_00823};; TaxID=323848 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849).;"
Acetyl-coenzyme A carboxylase carboxyl transferase subunit alpha n=1 Tax=Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849) RepID=ACCA_NITMU rbh
scnpilot_solids1_trim150_scaffold_234_29
Nitrosospira multiformis, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

30669..32522
DNA (1854bp) protein (618aa)
ABC transporter related protein n=1 Tax=Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849) RepID=Q2Y813_NITMU rbh
ABC transporter-like protein rbh
ABC transporter related protein {ECO:0000313|EMBL:ABB75108.1}; TaxID=323848 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849).;"
scnpilot_solids1_trim150_scaffold_234_30
Nitrosospira multiformis, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(32582..33184)
DNA (603bp) protein (201aa)
Negative regulator of AmpC, AmpD n=1 Tax=Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849) RepID=Q2Y812_NITMU rbh
N-acetyl-anhydromuranmyl-L-alanine amidase; K03806 AmpD protein rbh
Negative regulator of AmpC, AmpD {ECO:0000313|EMBL:ABB75109.1}; TaxID=323848 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849).;"
Displaying items 1-30 of 50 in total

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