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scnpilot_solids1_trim150_scaffold_4760

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Displaying 7 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_solids1_trim150_scaffold_4760_1
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(1..240)
DNA (240bp) protein (80aa)
Ribbon-helix-helix harboring protein n=1 Tax=Ralstonia solanacearum SD54 RepID=V4ZPU8_RALSL
CopG domain protein DNA-binding domain protein {ECO:0000313|EMBL:EIM01217.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
CopG family transcriptional regulator
scnpilot_solids1_trim150_scaffold_4760_2
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(237..2234)
DNA (1998bp) protein (666aa)
Conjugal transfer coupling protein TraG n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WP24_9GAMM
Conjugal transfer coupling protein TraG {ECO:0000313|EMBL:EIM01216.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
conjugal transfer coupling protein TraG; K03205 type IV secretion system protein VirD4
scnpilot_solids1_trim150_scaffold_4760_3
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(2453..2698)
DNA (246bp) protein (82aa)
Uncharacterized protein n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WP23_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EIM01215.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
putative lipoprotein
scnpilot_solids1_trim150_scaffold_4760_4
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(2741..3646)
DNA (906bp) protein (302aa)
LysR family transcriptional regulator n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WP22_9GAMM
LysR family transcriptional regulator {ECO:0000313|EMBL:EIM01214.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
LysR family transcriptional regulator
scnpilot_solids1_trim150_scaffold_4760_5
Burkholderia sp. A9, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(3857..4333)
DNA (477bp) protein (159aa)
Major facilitator superfamily protein n=1 Tax=Burkholderia sp. TJI49 RepID=F0G9L7_9BURK
Transcriptional regulator {ECO:0000313|EMBL:KHK59090.1}; TaxID=1365108 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia.;" source="Burkholderia sp. A9.;"
MFS efflux pump
scnpilot_solids1_trim150_scaffold_4760_6
unknown

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4608..4844
DNA (237bp) protein (79aa)

This feature has no annotations

scnpilot_solids1_trim150_scaffold_4760_7
Arenimonas oryziterrae, Arenimonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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5086..6072
DNA (987bp) protein (329aa)
hypothetical protein n=1 Tax=Dyella ginsengisoli RepID=UPI00034946FE rbh
Uncharacterized protein {ECO:0000313|EMBL:KFN42955.1}; TaxID=1121015 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Arenimonas.;" source="Arenimonas oryziterrae DSM 21050 = YC6267.;"
hypothetical protein
Displaying 7 items

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