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scnpilot_solids1_trim150_scaffold_1212

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Displaying 17 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_solids1_trim150_scaffold_1212_trna_1
unknown

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169..240
DNA (72bp)
transferRNA Val
scnpilot_solids1_trim150_scaffold_1212_1
Paenibacillus alvei, Paenibacillus, Bacillales, Bacilli, Firmicutes, Bacteria

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comp(330..815)
DNA (486bp) protein (162aa)
acetyltransferase n=1 Tax=Deinococcus sp. 2009 RepID=UPI0003B39AE5
Uncharacterized protein {ECO:0000313|EMBL:EJW20226.1}; TaxID=1206781 species="Bacteria; Firmicutes; Bacilli; Bacillales; Paenibacillaceae; Paenibacillus.;" source="Paenibacillus alvei DSM 29.;"
acetyltransferase
scnpilot_solids1_trim150_scaffold_1212_2
unknown

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comp(937..1107)
DNA (171bp) protein (57aa)

This feature has no annotations

scnpilot_solids1_trim150_scaffold_1212_3
GWA2_Bacteroidetes_30_7_curated, Bacteroidia, Bacteroidetes, Bacteria

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1936..2541
DNA (606bp) protein (202aa)
Uncharacterized protein n=1 Tax=Bacillus alcalophilus ATCC 27647 RepID=J8Q4G3_BACAO
hypothetical protein
Tax=GWA2_Bacteroidetes_30_7_curated
scnpilot_solids1_trim150_scaffold_1212_4
Sphaerobacter thermophilus, Sphaerobacter, Sphaerobacterales, Sphaerobacteridae, Chloroflexi, Bacteria

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comp(2953..4602)
DNA (1650bp) protein (550aa)
Extracellular solute-binding protein family 5 n=1 Tax=Sphaerobacter thermophilus (strain DSM 20745 / S 6022) RepID=D1C530_SPHTD
family 5 extracellular solute-binding protein; K02035 peptide/nickel transport system substrate-binding protein
Extracellular solute-binding protein family 5 {ECO:0000313|EMBL:ACZ39347.1}; TaxID=479434 species="Bacteria; Chloroflexi; Sphaerobacteridae; Sphaerobacterales; Sphaerobacterineae; Sphaerobacteraceae; Sphaerobacter.;" source="Sphaerobacter thermophilus (strain DSM 20745 / S 6022).;"
scnpilot_solids1_trim150_scaffold_1212_5
Candidatus Entotheonella sp. TSY1, Candidatus Entotheonella, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(4666..6240)
DNA (1575bp) protein (525aa)
5-oxoprolinase; K01474 N-methylhydantoinase B [EC:3.5.2.14] rbh
Hydantoin utilization protein B n=1 Tax=Advenella kashmirensis W13003 RepID=V8QX59_9BURK rbh
Uncharacterized protein {ECO:0000313|EMBL:ETW93119.1}; TaxID=1429438 species="Bacteria; Proteobacteria; Deltaproteobacteria; Candidatus Entotheonella.;" source="Candidatus Entotheonella sp. TSY1.;"
scnpilot_solids1_trim150_scaffold_1212_6
Inquilinus limosus, Inquilinus, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(6237..8405)
DNA (2169bp) protein (723aa)
5-oxoprolinase (ATP-hydrolyzing) (EC:3.5.2.9); K01473 N-methylhydantoinase A [EC:3.5.2.14]
5-oxoprolinase (ATP-hydrolyzing) n=1 Tax=Sphaerobacter thermophilus (strain DSM 20745 / S 6022) RepID=D1C905_SPHTD
Methylhydantoinase {ECO:0000313|EMBL:KGM31465.1}; Flags: Fragment;; TaxID=1398085 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Inquilinus.;" source="Inquilinus limosus MP06.;"
scnpilot_solids1_trim150_scaffold_1212_7
R_Acidobacteria_61_28, Acidobacteria, Bacteria

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comp(8402..9535)
DNA (1134bp) protein (378aa)
Acetylornithine deacetylase/succinyldiaminopimelate desuccinylase-like deacylase n=1 Tax=Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10) RepID=L0DLJ2_SINAD
acetylornithine deacetylase/succinyldiaminopimelate desuccinylase-like deacylase
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_61_28_curated
scnpilot_solids1_trim150_scaffold_1212_8
RBG_16_Armatimonadetes_67_12_curated, Armatimonadetes, Bacteria

Not on your lists

comp(9571..10515)
DNA (945bp) protein (315aa)
ABC-type dipeptide/oligopeptide/nickel transport system, permease component id=4626993 bin=GWF2_Methylomirabilis_70_14 species=Brevibacillus sp. BC25 genus=Brevibacillus taxon_order=Bacillales taxon_class=Bacilli phylum=Firmicutes tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis rbh
binding-protein-dependent transport systems inner membrane component; K02033 peptide/nickel transport system permease protein rbh
Tax=RBG_16_Armatimonadetes_67_12_curated
scnpilot_solids1_trim150_scaffold_1212_9
Brevibacillus sp. BC25, Brevibacillus, Bacillales, Bacilli, Firmicutes, Bacteria

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comp(10512..11357)
DNA (846bp) protein (282aa)
ABC-type dipeptide/oligopeptide/nickel transport system, permease component n=1 Tax=Brevibacillus sp. BC25 RepID=J3AKU1_9BACL rbh
ABC-type dipeptide/oligopeptide/nickel transport system, permease component {ECO:0000313|EMBL:EJL32699.1}; TaxID=1144308 species="Bacteria; Firmicutes; Bacilli; Bacillales; Paenibacillaceae; Brevibacillus.;" source="Brevibacillus sp. BC25.;"
binding-protein-dependent transport systems inner membrane component; K02034 peptide/nickel transport system permease protein
scnpilot_solids1_trim150_scaffold_1212_10
Fusobacterium varium, Fusobacterium, Fusobacteriales, Fusobacteriia, Fusobacteria, Bacteria

Not on your lists

comp(11410..12381)
DNA (972bp) protein (324aa)
Uncharacterized protein n=1 Tax=Fusobacterium varium ATCC 27725 RepID=C6JN76_FUSVA
Uncharacterized protein {ECO:0000313|EMBL:EES62531.1}; TaxID=469618 species="Bacteria; Fusobacteria; Fusobacteriales; Fusobacteriaceae; Fusobacterium.;" source="Fusobacterium varium ATCC 27725.;"
Leucyl aminopeptidase (aminopeptidase T)
scnpilot_solids1_trim150_scaffold_1212_11
Rubrobacter xylanophilus, Rubrobacter, Rubrobacterales, Rubrobacteria, Actinobacteria, Bacteria

Not on your lists

12388..13692
DNA (1305bp) protein (435aa)
citrate synthase; K01647 citrate synthase [EC:2.3.3.1]
Citrate synthase n=1 Tax=Rubrobacter xylanophilus (strain DSM 9941 / NBRC 16129) RepID=Q1AT05_RUBXD
Citrate synthase {ECO:0000313|EMBL:ABG05473.1}; TaxID=266117 species="Bacteria; Actinobacteria; Rubrobacteria; Rubrobacterales; Rubrobacterineae; Rubrobacteraceae; Rubrobacter.;" source="Rubrobacter xylanophilus (strain DSM 9941 / NBRC 16129).;"
scnpilot_solids1_trim150_scaffold_1212_12
R_Pseudomonas_63_210, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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14105..14497
DNA (393bp) protein (131aa)
ISHne3, transposase n=1 Tax=Hyphomonas neptunium (strain ATCC 15444) RepID=Q0BWM4_HYPNA
ISHne3, transposase
Tax=RIFCSPLOWO2_02_FULL_Pseudomonas_63_210_curated
scnpilot_solids1_trim150_scaffold_1212_13

Not on your lists

14525..15208
DNA (684bp) protein (228aa)
hypothetical protein n=1 Tax=Cupriavidus sp. BIS7 RepID=UPI0002DD761C
transposase
Marine sediment metagenome DNA, contig: S03H2_L02264 {ECO:0000313|EMBL:GAH44058.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
scnpilot_solids1_trim150_scaffold_1212_14
Mesorhizobium sp. LNHC252B00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15148..15735)
DNA (588bp) protein (196aa)
UPI0003CF94DA related cluster n=2 Tax=unknown RepID=UPI0003CF94DA
Transposase ISRM5 {ECO:0000313|EMBL:ESY59943.1}; TaxID=1287252 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LNHC252B00.;"
transposase mutator type
scnpilot_solids1_trim150_scaffold_1212_15
unknown

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comp(16250..16366)
DNA (117bp) protein (39aa)

This feature has no annotations

scnpilot_solids1_trim150_scaffold_1212_16
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(16484..16672)
DNA (189bp) protein (63aa)
amidase; K02433 aspartyl-tRNA(Asn)/glutamyl-tRNA (Gln) amidotransferase subunit A [EC:6.3.5.6 6.3.5.7]
Glutamyl-tRNA(Gln) amidotransferase subunit A id=2591441 bin=GWC2_Methylomirabilis_70_16 species=Sphaerobacter thermophilus genus=Sphaerobacter taxon_order=Sphaerobacterales taxon_class=Thermomicrobia phylum=Chloroflexi tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
Displaying 17 items

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