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scnpilot_solids1_trim150_scaffold_1910

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Displaying 12 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_solids1_trim150_scaffold_1910_1
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(62..1054)
DNA (993bp) protein (331aa)
Flavin-dependent oxidoreductase n=1 Tax=Rhodanobacter denitrificans RepID=I4WWS1_9GAMM
luciferase family oxidoreductase, group 1
Luciferase family oxidoreductase, group 1 {ECO:0000313|EMBL:AGG89529.1}; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
scnpilot_solids1_trim150_scaffold_1910_2
unknown

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1286..1387
DNA (102bp) protein (34aa)

This feature has no annotations

scnpilot_solids1_trim150_scaffold_1910_3
Rhodanobacter fulvus, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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1613..2668
DNA (1056bp) protein (352aa)
Putative signal transduction protein n=1 Tax=Rhodanobacter fulvus Jip2 RepID=I4VPA1_9GAMM
Putative signal transduction protein {ECO:0000313|EMBL:EIL89042.1}; TaxID=1163408 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter fulvus Jip2.;"
putative signal transduction protein
scnpilot_solids1_trim150_scaffold_1910_4
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(2725..4212)
DNA (1488bp) protein (496aa)
Lytic murein transglycosylase n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W661_9GAMM
Lytic murein transglycosylase {ECO:0000313|EMBL:EIL94952.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
soluble lytic murein transglycosylase-like protein
scnpilot_solids1_trim150_scaffold_1910_5
Luteibacter yeojuensis, Luteibacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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4407..4910
DNA (504bp) protein (168aa)
transcription elongation factor GreB n=1 Tax=Dyella japonica RepID=UPI0003734EB1
Transcription elongation factor GreB {ECO:0000256|HAMAP-Rule:MF_00930}; Transcript cleavage factor GreB {ECO:0000256|HAMAP-Rule:MF_00930}; TaxID=345309 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Luteibacter.;" source="Luteibacter yeojuensis.;"
transcription elongation factor GreB
scnpilot_solids1_trim150_scaffold_1910_6
unknown

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4910..5404
DNA (495bp) protein (165aa)
hypothetical protein
scnpilot_solids1_trim150_scaffold_1910_7
RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated, Acidobacteria, Bacteria

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5501..6955
DNA (1455bp) protein (485aa)
Putative decarboxylase n=1 Tax=Sorangium cellulosum (strain So ce56) RepID=A9G106_SORC5 rbh
decarboxylase rbh
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated
scnpilot_solids1_trim150_scaffold_1910_8
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(7089..7856)
DNA (768bp) protein (256aa)
Uncharacterized protein n=1 Tax=Rhodanobacter denitrificans RepID=I4WLD5_9GAMM
Protein of unknown function (DUF3025)
Uncharacterized protein {ECO:0000313|EMBL:AGG88482.1}; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
scnpilot_solids1_trim150_scaffold_1910_9
RIFOXYA1_FULL_Rhodanobacter_67_6_curated, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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8102..8773
DNA (672bp) protein (224aa)
Carboxymethylenebutenolidase n=1 Tax=Rhodanobacter denitrificans RepID=I4WLD3_9GAMM
dienelactone hydrolase-like enzyme
Tax=RIFOXYA1_FULL_Rhodanobacter_67_6_curated
scnpilot_solids1_trim150_scaffold_1910_10
Dyella jiangningensis, Dyella, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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8770..9210
DNA (441bp) protein (147aa)
hypothetical protein n=1 Tax=Dyella ginsengisoli RepID=UPI000349CE79
Diadenosine tetraphosphate hydrolase {ECO:0000313|EMBL:AHX13834.1}; TaxID=1379159 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Dyella.;" source="Dyella jiangningensis.;"
HIT family hydrolase, diadenosine tetraphosphate hydrolase
scnpilot_solids1_trim150_scaffold_1910_11
Dyella jiangningensis, Dyella, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(9296..9787)
DNA (492bp) protein (164aa)
hypothetical protein n=1 Tax=Dyella japonica RepID=UPI00031A2F76
Uncharacterized protein {ECO:0000313|EMBL:AHX13835.1}; TaxID=1379159 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Dyella.;" source="Dyella jiangningensis.;"
hypothetical protein
scnpilot_solids1_trim150_scaffold_1910_12
Thauera terpenica, Thauera, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(10049..10336)
DNA (288bp) protein (96aa)
Deoxycytidine triphosphate deaminase {ECO:0000256|HAMAP-Rule:MF_00146}; Short=dCTP deaminase {ECO:0000256|HAMAP-Rule:MF_00146};; EC=3.5.4.13 {ECO:0000256|HAMAP-Rule:MF_00146};; TaxID=1348657 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Thauera.;" source="Thauera terpenica 58Eu.;"
dcd; deoxycytidine triphosphate deaminase (EC:3.5.4.13); K01494 dCTP deaminase [EC:3.5.4.13]
Deoxycytidine triphosphate deaminase n=1 Tax=Thauera terpenica 58Eu RepID=S9ZQ06_9RHOO
Displaying 12 items

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